RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 LRP5O75197 1615 aa25.17■■□□□ 1.62
PBX3-211ENST00000497091 R3HDM1Q15032 1099 aaKnown RBP25.17■■□□□ 1.62
PBX3-211ENST00000497091 LOC102724428A0A0B4J2F2 783 aa25.16■■□□□ 1.62
PBX3-211ENST00000497091 SIK1P57059 783 aa25.16■■□□□ 1.62
PBX3-211ENST00000497091 MCM10Q7L590 875 aa25.16■■□□□ 1.62
PBX3-211ENST00000497091 STK32BQ9NY57 414 aa25.16■■□□□ 1.62
PBX3-211ENST00000497091 PSDA5PKW4 1024 aaPredicted RBP25.15■■□□□ 1.62
PBX3-211ENST00000497091 TMPOP42166 694 aaKnown RBP25.15■■□□□ 1.62
PBX3-211ENST00000497091 RIPK4P57078 832 aa25.15■■□□□ 1.62
PBX3-211ENST00000497091 DCTN1Q14203 1278 aa25.15■■□□□ 1.62
PBX3-211ENST00000497091 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
PBX3-211ENST00000497091 RBM42Q9BTD8 480 aaKnown RBP25.15■■□□□ 1.62
PBX3-211ENST00000497091 RGPD3A6NKT7 1758 aaPredicted RBP25.13■■□□□ 1.61
PBX3-211ENST00000497091 RGPD4Q7Z3J3 1758 aa25.13■■□□□ 1.61
PBX3-211ENST00000497091 PTCD1O75127 700 aaKnown RBP25.13■■□□□ 1.61
PBX3-211ENST00000497091 ATP6V1AP38606 617 aa25.13■■□□□ 1.61
PBX3-211ENST00000497091 SLC15A2Q16348 729 aa25.13■■□□□ 1.61
PBX3-211ENST00000497091 ANO8Q9HCE9 1232 aaPredicted RBP25.13■■□□□ 1.61
PBX3-211ENST00000497091 ITGB4P16144 1822 aa25.13■■□□□ 1.61
PBX3-211ENST00000497091 CEMIPQ8WUJ3 1361 aa25.13■■□□□ 1.61
PBX3-211ENST00000497091 SLC39A6Q13433 755 aa25.12■■□□□ 1.61
PBX3-211ENST00000497091 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
PBX3-211ENST00000497091 RRP7AQ9Y3A4 280 aaKnown RBP25.11■■□□□ 1.61
PBX3-211ENST00000497091 RREB1Q92766 1687 aa25.1■■□□□ 1.61
PBX3-211ENST00000497091 BTBD11A6QL63 1104 aa25.09■■□□□ 1.61
PBX3-211ENST00000497091 LMOD3Q0VAK6 560 aa25.09■■□□□ 1.61
PBX3-211ENST00000497091 TAF7Q15545 349 aaPredicted RBP25.09■■□□□ 1.61
PBX3-211ENST00000497091 TTC5Q8N0Z6 440 aa25.09■■□□□ 1.61
PBX3-211ENST00000497091 AKT1S1Q96B36 256 aa25.08■■□□□ 1.61
PBX3-211ENST00000497091 SLC4A9Q96Q91 983 aa25.08■■□□□ 1.61
PBX3-211ENST00000497091 SCN11AQ9UI33 1791 aa25.08■■□□□ 1.6
PBX3-211ENST00000497091 APAF1O14727 1248 aa25.07■■□□□ 1.6
PBX3-211ENST00000497091 ITPK1Q13572 414 aa25.07■■□□□ 1.6
PBX3-211ENST00000497091 MRC1P22897 1456 aa25.07■■□□□ 1.6
PBX3-211ENST00000497091 ZNF827Q17R98 1081 aa25.06■■□□□ 1.6
PBX3-211ENST00000497091 ZNF790Q6PG37 636 aa25.06■■□□□ 1.6
PBX3-211ENST00000497091 THUMPD2Q9BTF0 503 aaKnown RBP25.06■■□□□ 1.6
PBX3-211ENST00000497091 TFCP2L1Q9NZI6 479 aa25.06■■□□□ 1.6
PBX3-211ENST00000497091 NUP188Q5SRE5 1749 aa25.06■■□□□ 1.6
PBX3-211ENST00000497091 ADAMTS7Q9UKP4 1686 aa25.05■■□□□ 1.6
PBX3-211ENST00000497091 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
PBX3-211ENST00000497091 LINC00116Q8NCU8 138 aa25.04■■□□□ 1.6
PBX3-211ENST00000497091 LY75O60449 1722 aa25.03■■□□□ 1.6
PBX3-211ENST00000497091 CCER2I3L3R5 266 aa25.02■■□□□ 1.6
PBX3-211ENST00000497091 AK7Q96M32 723 aa25.02■■□□□ 1.6
PBX3-211ENST00000497091 MIS18AQ9NYP9 233 aa25.02■■□□□ 1.6
PBX3-211ENST00000497091 TRIM35Q9UPQ4 493 aa25.02■■□□□ 1.6
PBX3-211ENST00000497091 KCNQ3O43525 872 aa25.01■■□□□ 1.59
PBX3-211ENST00000497091 VSIG10Q8N0Z9 540 aa25.01■■□□□ 1.59
PBX3-211ENST00000497091 ZNF496Q96IT1 587 aaPredicted RBP25.01■■□□□ 1.59
PBX3-211ENST00000497091 FMNL2Q96PY5 1086 aa25■■□□□ 1.59
PBX3-211ENST00000497091 RC3H1Q5TC82 1133 aaKnown RBP24.99■■□□□ 1.59
PBX3-211ENST00000497091 DNAJC10Q8IXB1 793 aa24.98■■□□□ 1.59
PBX3-211ENST00000497091 MIER1Q8N108 512 aa24.98■■□□□ 1.59
PBX3-211ENST00000497091 PDGFDQ9GZP0 370 aaPredicted RBP24.98■■□□□ 1.59
PBX3-211ENST00000497091 FLAD1Q8NFF5 587 aa24.97■■□□□ 1.59
PBX3-211ENST00000497091 TEX13AQ9BXU3 409 aaPredicted RBP24.97■■□□□ 1.59
PBX3-211ENST00000497091 MSH5O43196 834 aa24.96■■□□□ 1.59
PBX3-211ENST00000497091 PNPLA7Q6ZV29 1317 aa24.95■■□□□ 1.58
PBX3-211ENST00000497091 PAPPAQ13219 1627 aa24.95■■□□□ 1.58
PBX3-211ENST00000497091 GNPATO15228 680 aa24.95■■□□□ 1.58
PBX3-211ENST00000497091 STARD3NLO95772 234 aa24.95■■□□□ 1.58
PBX3-211ENST00000497091 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
PBX3-211ENST00000497091 HEG1Q9ULI3 1381 aa24.94■■□□□ 1.58
PBX3-211ENST00000497091 SENP3-EIF4A1A0A087X0R7 540 aa24.94■■□□□ 1.58
PBX3-211ENST00000497091 CYP19A1P11511 503 aaPredicted RBP24.94■■□□□ 1.58
PBX3-211ENST00000497091 CRKLP46109 303 aaKnown RBP24.94■■□□□ 1.58
PBX3-211ENST00000497091 COL23A1Q86Y22 540 aaPredicted RBP24.94■■□□□ 1.58
PBX3-211ENST00000497091 TSPYL4Q9UJ04 414 aa24.94■■□□□ 1.58
PBX3-211ENST00000497091 RTCBQ9Y3I0 505 aaKnown RBP24.94■■□□□ 1.58
PBX3-211ENST00000497091 CNTNAP4Q9C0A0 1308 aa24.93■■□□□ 1.58
PBX3-211ENST00000497091 CALD1Q05682 793 aaKnown RBP24.93■■□□□ 1.58
PBX3-211ENST00000497091 LAS1LQ9Y4W2 734 aaKnown RBP24.93■■□□□ 1.58
PBX3-211ENST00000497091 KCPQ6ZWJ8 1503 aa24.92■■□□□ 1.58
PBX3-211ENST00000497091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.92■■□□□ 1.58
PBX3-211ENST00000497091 RPS6KA4O75676 772 aa24.92■■□□□ 1.58
PBX3-211ENST00000497091 PHF14O94880 888 aa24.92■■□□□ 1.58
PBX3-211ENST00000497091 SNRPA1P09661 255 aaKnown RBP24.92■■□□□ 1.58
PBX3-211ENST00000497091 SSFA2P28290 1259 aa24.92■■□□□ 1.58
PBX3-211ENST00000497091 SLC16A10Q8TF71 515 aa24.92■■□□□ 1.58
PBX3-211ENST00000497091 ZBTB7AO95365 584 aa24.91■■□□□ 1.58
PBX3-211ENST00000497091 NCBP3Q53F19 620 aaKnown RBP24.91■■□□□ 1.58
PBX3-211ENST00000497091 INTS5Q6P9B9 1019 aaKnown RBP24.91■■□□□ 1.58
PBX3-211ENST00000497091 SMIM5Q71RC9 77 aa24.91■■□□□ 1.58
PBX3-211ENST00000497091 CCDC87Q9NVE4 849 aa24.91■■□□□ 1.58
PBX3-211ENST00000497091 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
PBX3-211ENST00000497091 CHL1O00533 1208 aa24.9■■□□□ 1.58
PBX3-211ENST00000497091 CCDC27Q2M243 656 aa24.9■■□□□ 1.58
PBX3-211ENST00000497091 TRAPPC3LQ5T215 181 aa24.9■■□□□ 1.58
PBX3-211ENST00000497091 AMIGO3Q86WK7 504 aa24.9■■□□□ 1.58
PBX3-211ENST00000497091 SPON1Q9HCB6 807 aa24.9■■□□□ 1.58
PBX3-211ENST00000497091 VIRMAQ69YN4 1812 aaKnown RBP24.9■■□□□ 1.58
PBX3-211ENST00000497091 C5P01031 1676 aa24.89■■□□□ 1.58
PBX3-211ENST00000497091 EIF4A1P60842 406 aaKnown RBP24.89■■□□□ 1.58
PBX3-211ENST00000497091 ATF5Q9Y2D1 282 aaPredicted RBP24.89■■□□□ 1.58
PBX3-211ENST00000497091 SALL2Q9Y467 1007 aaPredicted RBP24.89■■□□□ 1.58
PBX3-211ENST00000497091 C4BP0C0L5 1744 aa24.89■■□□□ 1.57
PBX3-211ENST00000497091 SIPA1L3O60292 1781 aaPredicted RBP24.88■■□□□ 1.57
PBX3-211ENST00000497091 CFAP44Q96MT7 982 aa24.88■■□□□ 1.57
PBX3-211ENST00000497091 MTFR1LQ9H019 292 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms