RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
HOXA9-206ENST00000497089 ABCC11Q96J66 1382 aa9.38□□□□□ -0.91
HOXA9-206ENST00000497089 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 NECTIN2Q92692 538 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 SPATA31A6Q5VVP1 1343 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 PPP4CP60510 307 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
HOXA9-206ENST00000497089 DIXDC1Q155Q3 683 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 RNF166Q96A37 237 aaPredicted RBP9.37□□□□□ -0.91
HOXA9-206ENST00000497089 SIRT1Q96EB6 747 aa9.37□□□□□ -0.91
HOXA9-206ENST00000497089 C14orf93Q9H972 538 aaKnown RBP9.37□□□□□ -0.91
HOXA9-206ENST00000497089 RGS17Q9UGC6 210 aaPredicted RBP9.37□□□□□ -0.91
HOXA9-206ENST00000497089 DIEXFQ68CQ4 756 aaKnown RBP9.36□□□□□ -0.91
HOXA9-206ENST00000497089 C1orf167Q5SNV9 1468 aa9.35□□□□□ -0.91
HOXA9-206ENST00000497089 YTHDC2Q9H6S0 1430 aaKnown RBP9.35□□□□□ -0.91
HOXA9-206ENST00000497089 WBP1LQ9NX94 342 aa9.35□□□□□ -0.91
HOXA9-206ENST00000497089 LRP6O75581 1613 aa9.33□□□□□ -0.92
HOXA9-206ENST00000497089 CFHP08603 1231 aa9.33□□□□□ -0.92
HOXA9-206ENST00000497089 GCGRP47871 477 aa9.33□□□□□ -0.92
HOXA9-206ENST00000497089 TMEM132EQ6IEE7 984 aa9.33□□□□□ -0.92
HOXA9-206ENST00000497089 LRRC59Q96AG4 307 aaKnown RBP9.33□□□□□ -0.92
HOXA9-206ENST00000497089 SOS2Q07890 1332 aaPredicted RBP9.32□□□□□ -0.92
HOXA9-206ENST00000497089 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 PTPN5P54829 565 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 WAPLQ7Z5K2 1190 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 TBC1D2Q9BYX2 928 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 DLC1Q96QB1 1528 aa9.32□□□□□ -0.92
HOXA9-206ENST00000497089 FMN2Q9NZ56 1722 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 DHX57Q6P158 1386 aaKnown RBP9.31□□□□□ -0.92
HOXA9-206ENST00000497089 PLEKHH1Q9ULM0 1364 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 FLIIQ13045 1269 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 NYAP1Q6ZVC0 841 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 PRR14Q9BWN1 585 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 STK26Q9P289 416 aa9.31□□□□□ -0.92
HOXA9-206ENST00000497089 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
HOXA9-206ENST00000497089 APLP1P51693 650 aa9.3□□□□□ -0.92
HOXA9-206ENST00000497089 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
HOXA9-206ENST00000497089 MYSM1Q5VVJ2 828 aa9.3□□□□□ -0.92
HOXA9-206ENST00000497089 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
HOXA9-206ENST00000497089 KDM4AO75164 1064 aa9.29□□□□□ -0.92
HOXA9-206ENST00000497089 HCSTQ9UBK5 93 aa9.29□□□□□ -0.92
HOXA9-206ENST00000497089 ADGRB2O60241 1585 aa9.29□□□□□ -0.92
HOXA9-206ENST00000497089 COL22A1Q8NFW1 1626 aaPredicted RBP9.28□□□□□ -0.92
HOXA9-206ENST00000497089 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
HOXA9-206ENST00000497089 DCAF11Q8TEB1 546 aa9.28□□□□□ -0.92
HOXA9-206ENST00000497089 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
HOXA9-206ENST00000497089 PXDNQ92626 1479 aa9.28□□□□□ -0.92
HOXA9-206ENST00000497089 KIF1AQ12756 1690 aa9.28□□□□□ -0.92
HOXA9-206ENST00000497089 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
HOXA9-206ENST00000497089 KIAA1210Q9ULL0 1709 aa9.27□□□□□ -0.92
HOXA9-206ENST00000497089 ACTN4O43707 911 aaKnown RBP9.27□□□□□ -0.93
HOXA9-206ENST00000497089 USP46P62068 366 aa9.27□□□□□ -0.93
HOXA9-206ENST00000497089 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
HOXA9-206ENST00000497089 ZNF772Q68DY9 489 aaPredicted RBP9.27□□□□□ -0.93
HOXA9-206ENST00000497089 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
HOXA9-206ENST00000497089 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
HOXA9-206ENST00000497089 FUT2Q10981 343 aa9.26□□□□□ -0.93
HOXA9-206ENST00000497089 PRAM1Q96QH2 718 aa9.26□□□□□ -0.93
HOXA9-206ENST00000497089 ZMYND15Q9H091 742 aa9.26□□□□□ -0.93
HOXA9-206ENST00000497089 ANKARQ7Z5J8 1434 aa9.26□□□□□ -0.93
HOXA9-206ENST00000497089 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
HOXA9-206ENST00000497089 RGPD8O14715 1765 aaPredicted RBP9.25□□□□□ -0.93
HOXA9-206ENST00000497089 USP32Q8NFA0 1604 aa9.25□□□□□ -0.93
HOXA9-206ENST00000497089 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
HOXA9-206ENST00000497089 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
HOXA9-206ENST00000497089 FOXO3O43524 673 aa9.24□□□□□ -0.93
HOXA9-206ENST00000497089 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
HOXA9-206ENST00000497089 MEX3CQ5U5Q3 659 aaKnown RBP9.24□□□□□ -0.93
HOXA9-206ENST00000497089 NUTM2AQ8IVF1 878 aaPredicted RBP9.24□□□□□ -0.93
HOXA9-206ENST00000497089 CDK12Q9NYV4 1490 aaPredicted RBP9.24□□□□□ -0.93
HOXA9-206ENST00000497089 ARHGEF28Q8N1W1 1705 aaKnown RBP9.24□□□□□ -0.93
HOXA9-206ENST00000497089 HOXA2O43364 376 aa9.24□□□□□ -0.93
HOXA9-206ENST00000497089 GRIPAP1Q4V328 841 aa9.24□□□□□ -0.93
HOXA9-206ENST00000497089 POGKQ9P215 609 aa9.24□□□□□ -0.93
HOXA9-206ENST00000497089 AFF2P51816 1311 aa9.24□□□□□ -0.93
HOXA9-206ENST00000497089 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
HOXA9-206ENST00000497089 TRAK1Q9UPV9 953 aa9.23□□□□□ -0.93
HOXA9-206ENST00000497089 PCDHB3Q9Y5E6 796 aa9.23□□□□□ -0.93
HOXA9-206ENST00000497089 SPATA31A3Q5VYP0 1347 aa9.23□□□□□ -0.93
HOXA9-206ENST00000497089 EIF3AQ14152 1382 aaKnown RBP9.23□□□□□ -0.93
HOXA9-206ENST00000497089 MARF1Q9Y4F3 1742 aaKnown RBP9.23□□□□□ -0.93
HOXA9-206ENST00000497089 TULP4Q9NRJ4 1543 aa9.22□□□□□ -0.93
HOXA9-206ENST00000497089 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
HOXA9-206ENST00000497089 MORN1Q5T089 497 aa9.22□□□□□ -0.93
HOXA9-206ENST00000497089 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
HOXA9-206ENST00000497089 SBNO1A3KN83 1393 aa9.21□□□□□ -0.94
HOXA9-206ENST00000497089 WASLO00401 505 aaPredicted RBP9.21□□□□□ -0.94
HOXA9-206ENST00000497089 SPTLC1O15269 473 aa9.21□□□□□ -0.94
HOXA9-206ENST00000497089 SAFB2Q14151 953 aaKnown RBP eCLIP9.21□□□□□ -0.94
HOXA9-206ENST00000497089 PUS10Q3MIT2 529 aaKnown RBP9.21□□□□□ -0.94
HOXA9-206ENST00000497089 LIMD1Q9UGP4 676 aa9.21□□□□□ -0.94
HOXA9-206ENST00000497089 TNS3Q68CZ2 1445 aa9.2□□□□□ -0.94
HOXA9-206ENST00000497089 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
HOXA9-206ENST00000497089 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms