RNA–Protein interactions for RNA: ENST00000497057.1

PHLDA3-204, Transcript of pleckstrin homology like domain family A member 3, humanhuman

TSL 2

Gene PHLDA3, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-204ENST00000497057 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
PHLDA3-204ENST00000497057 MRC1P22897 1456 aa20.88■□□□□ 0.93
PHLDA3-204ENST00000497057 FAM196AQ6ZSG2 479 aa20.87■□□□□ 0.93
PHLDA3-204ENST00000497057 CFAP44Q96MT7 982 aa20.87■□□□□ 0.93
PHLDA3-204ENST00000497057 BTBD11A6QL63 1104 aa20.86■□□□□ 0.93
PHLDA3-204ENST00000497057 PRIM1P49642 420 aaKnown RBP20.86■□□□□ 0.93
PHLDA3-204ENST00000497057 TSPYL4Q9UJ04 414 aa20.86■□□□□ 0.93
PHLDA3-204ENST00000497057 BCL9O00512 1426 aa20.86■□□□□ 0.93
PHLDA3-204ENST00000497057 CDCA7LQ96GN5 454 aa20.85■□□□□ 0.93
PHLDA3-204ENST00000497057 ITGB4P16144 1822 aa20.84■□□□□ 0.93
PHLDA3-204ENST00000497057 SLFN5Q08AF3 891 aa20.84■□□□□ 0.93
PHLDA3-204ENST00000497057 BABAM1Q9NWV8 329 aa20.84■□□□□ 0.93
PHLDA3-204ENST00000497057 SIPA1L3O60292 1781 aaPredicted RBP20.84■□□□□ 0.93
PHLDA3-204ENST00000497057 MIS18AQ9NYP9 233 aa20.83■□□□□ 0.93
PHLDA3-204ENST00000497057 CHL1O00533 1208 aa20.82■□□□□ 0.92
PHLDA3-204ENST00000497057 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
PHLDA3-204ENST00000497057 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
PHLDA3-204ENST00000497057 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
PHLDA3-204ENST00000497057 SPINK5Q9NQ38 1064 aaPredicted RBP20.82■□□□□ 0.92
PHLDA3-204ENST00000497057 MBIPQ9NS73 344 aa20.82■□□□□ 0.92
PHLDA3-204ENST00000497057 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
PHLDA3-204ENST00000497057 NHSQ6T4R5 1651 aa20.81■□□□□ 0.92
PHLDA3-204ENST00000497057 PIGBQ92521 554 aa20.81■□□□□ 0.92
PHLDA3-204ENST00000497057 KCNQ2O43526 872 aa20.8■□□□□ 0.92
PHLDA3-204ENST00000497057 SBF2Q86WG5 1849 aa20.79■□□□□ 0.92
PHLDA3-204ENST00000497057 SLC39A6Q13433 755 aa20.79■□□□□ 0.92
PHLDA3-204ENST00000497057 KDM3BQ7LBC6 1761 aa20.78■□□□□ 0.92
PHLDA3-204ENST00000497057 ZNF790Q6PG37 636 aa20.78■□□□□ 0.92
PHLDA3-204ENST00000497057 DUSP27Q5VZP5 1158 aa20.77■□□□□ 0.92
PHLDA3-204ENST00000497057 BCL11BQ9C0K0 894 aaPredicted RBP20.77■□□□□ 0.92
PHLDA3-204ENST00000497057 TRIM37O94972 964 aa20.76■□□□□ 0.91
PHLDA3-204ENST00000497057 TRMT2AQ8IZ69 625 aaKnown RBP20.75■□□□□ 0.91
PHLDA3-204ENST00000497057 SMARCC1Q92922 1105 aaPredicted RBP20.75■□□□□ 0.91
PHLDA3-204ENST00000497057 ATG3Q9NT62 314 aa20.75■□□□□ 0.91
PHLDA3-204ENST00000497057 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
PHLDA3-204ENST00000497057 PAPPAQ13219 1627 aa20.75■□□□□ 0.91
PHLDA3-204ENST00000497057 BTAF1O14981 1849 aa20.74■□□□□ 0.91
PHLDA3-204ENST00000497057 KCNQ3O43525 872 aa20.74■□□□□ 0.91
PHLDA3-204ENST00000497057 EXOSC9Q06265 439 aaKnown RBP20.74■□□□□ 0.91
PHLDA3-204ENST00000497057 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
PHLDA3-204ENST00000497057 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
PHLDA3-204ENST00000497057 PTCD1O75127 700 aaKnown RBP20.72■□□□□ 0.91
PHLDA3-204ENST00000497057 CENPBP07199 599 aaPredicted RBP20.72■□□□□ 0.91
PHLDA3-204ENST00000497057 PTF1AQ7RTS3 328 aa20.72■□□□□ 0.91
PHLDA3-204ENST00000497057 RBM42Q9BTD8 480 aaKnown RBP20.72■□□□□ 0.91
PHLDA3-204ENST00000497057 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
PHLDA3-204ENST00000497057 ZNF496Q96IT1 587 aaPredicted RBP20.71■□□□□ 0.91
PHLDA3-204ENST00000497057 UBR2Q8IWV8 1755 aa20.7■□□□□ 0.9
PHLDA3-204ENST00000497057 ELL2O00472 640 aaPredicted RBP20.7■□□□□ 0.9
PHLDA3-204ENST00000497057 TWISTNBQ3B726 338 aaPredicted RBP20.7■□□□□ 0.9
PHLDA3-204ENST00000497057 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
PHLDA3-204ENST00000497057 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
PHLDA3-204ENST00000497057 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
PHLDA3-204ENST00000497057 EP400Q96L91 3159 aa20.69■□□□□ 0.9
PHLDA3-204ENST00000497057 HEG1Q9ULI3 1381 aa20.69■□□□□ 0.9
PHLDA3-204ENST00000497057 SNRPA1P09661 255 aaKnown RBP20.68■□□□□ 0.9
PHLDA3-204ENST00000497057 SF3B2Q13435 895 aaKnown RBP20.68■□□□□ 0.9
PHLDA3-204ENST00000497057 APBA3O96018 575 aa20.67■□□□□ 0.9
PHLDA3-204ENST00000497057 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
PHLDA3-204ENST00000497057 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
PHLDA3-204ENST00000497057 SOS1Q07889 1333 aaPredicted RBP20.67■□□□□ 0.9
PHLDA3-204ENST00000497057 GIGYF1O75420 1035 aaPredicted RBP20.66■□□□□ 0.9
PHLDA3-204ENST00000497057 HOXB7P09629 217 aa20.66■□□□□ 0.9
PHLDA3-204ENST00000497057 VSIG10Q8N0Z9 540 aa20.66■□□□□ 0.9
PHLDA3-204ENST00000497057 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
PHLDA3-204ENST00000497057 LOC102724428A0A0B4J2F2 783 aa20.65■□□□□ 0.9
PHLDA3-204ENST00000497057 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
PHLDA3-204ENST00000497057 SIK1P57059 783 aa20.65■□□□□ 0.9
PHLDA3-204ENST00000497057 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
PHLDA3-204ENST00000497057 TNS1Q9HBL0 1735 aaKnown RBP20.64■□□□□ 0.9
PHLDA3-204ENST00000497057 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
PHLDA3-204ENST00000497057 VAMP4O75379 141 aa20.63■□□□□ 0.89
PHLDA3-204ENST00000497057 HDGFL1Q5TGJ6 251 aa20.63■□□□□ 0.89
PHLDA3-204ENST00000497057 ZNF428Q96B54 188 aa20.63■□□□□ 0.89
PHLDA3-204ENST00000497057 CCNL1Q9UK58 526 aaPredicted RBP20.63■□□□□ 0.89
PHLDA3-204ENST00000497057 C5P01031 1676 aa20.62■□□□□ 0.89
PHLDA3-204ENST00000497057 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
PHLDA3-204ENST00000497057 LY75O60449 1722 aa20.61■□□□□ 0.89
PHLDA3-204ENST00000497057 PRAMEF22A3QJZ6 481 aa20.61■□□□□ 0.89
PHLDA3-204ENST00000497057 STARD3NLO95772 234 aa20.61■□□□□ 0.89
PHLDA3-204ENST00000497057 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
PHLDA3-204ENST00000497057 DNAJC10Q8IXB1 793 aa20.61■□□□□ 0.89
PHLDA3-204ENST00000497057 NECTIN2Q92692 538 aa20.61■□□□□ 0.89
PHLDA3-204ENST00000497057 PLSCR1O15162 318 aa20.6■□□□□ 0.89
PHLDA3-204ENST00000497057 BAG6P46379 1132 aa20.6■□□□□ 0.89
PHLDA3-204ENST00000497057 CCDC125Q86Z20 511 aa20.6■□□□□ 0.89
PHLDA3-204ENST00000497057 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
PHLDA3-204ENST00000497057 RCAN3Q9UKA8 241 aa20.6■□□□□ 0.89
PHLDA3-204ENST00000497057 ZNF831Q5JPB2 1677 aa20.59■□□□□ 0.89
PHLDA3-204ENST00000497057 HMGB2P26583 209 aaKnown RBP20.59■□□□□ 0.89
PHLDA3-204ENST00000497057 SLC27A3Q5K4L6 730 aa20.59■□□□□ 0.89
PHLDA3-204ENST00000497057 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
PHLDA3-204ENST00000497057 USP16Q9Y5T5 823 aa20.59■□□□□ 0.89
PHLDA3-204ENST00000497057 TJP1Q07157 1748 aa20.58■□□□□ 0.89
PHLDA3-204ENST00000497057 SMC4Q9NTJ3 1288 aa20.58■□□□□ 0.89
PHLDA3-204ENST00000497057 RGPD3A6NKT7 1758 aaPredicted RBP20.57■□□□□ 0.88
PHLDA3-204ENST00000497057 RGPD4Q7Z3J3 1758 aa20.57■□□□□ 0.88
PHLDA3-204ENST00000497057 TCERG1O14776 1098 aaKnown RBP20.57■□□□□ 0.88
PHLDA3-204ENST00000497057 ITPK1Q13572 414 aa20.57■□□□□ 0.88
PHLDA3-204ENST00000497057 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms