RNA–Protein interactions for RNA: ENST00000496962.1

GGCX-210, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 684 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-210ENST00000496962 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
GGCX-210ENST00000496962 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
GGCX-210ENST00000496962 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
GGCX-210ENST00000496962 BTBD11A6QL63 1104 aa17.03■□□□□ 0.32
GGCX-210ENST00000496962 PIGBQ92521 554 aa17.03■□□□□ 0.32
GGCX-210ENST00000496962 SMARCC1Q92922 1105 aaPredicted RBP17.03■□□□□ 0.32
GGCX-210ENST00000496962 E9PSI1 815 aa17.02■□□□□ 0.32
GGCX-210ENST00000496962 CHL1O00533 1208 aa17.02■□□□□ 0.32
GGCX-210ENST00000496962 HMGB2P26583 209 aaKnown RBP17.02■□□□□ 0.32
GGCX-210ENST00000496962 CCDC125Q86Z20 511 aa17.02■□□□□ 0.32
GGCX-210ENST00000496962 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
GGCX-210ENST00000496962 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
GGCX-210ENST00000496962 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
GGCX-210ENST00000496962 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
GGCX-210ENST00000496962 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
GGCX-210ENST00000496962 KCNQ2O43526 872 aa17■□□□□ 0.31
GGCX-210ENST00000496962 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
GGCX-210ENST00000496962 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
GGCX-210ENST00000496962 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
GGCX-210ENST00000496962 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
GGCX-210ENST00000496962 SBF2Q86WG5 1849 aa16.99■□□□□ 0.31
GGCX-210ENST00000496962 TRIM37O94972 964 aa16.99■□□□□ 0.31
GGCX-210ENST00000496962 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
GGCX-210ENST00000496962 LAS1LQ9Y4W2 734 aaKnown RBP16.99■□□□□ 0.31
GGCX-210ENST00000496962 NHSQ6T4R5 1651 aa16.99■□□□□ 0.31
GGCX-210ENST00000496962 ITGB4P16144 1822 aa16.98■□□□□ 0.31
GGCX-210ENST00000496962 SF3B2Q13435 895 aaKnown RBP16.98■□□□□ 0.31
GGCX-210ENST00000496962 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
GGCX-210ENST00000496962 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
GGCX-210ENST00000496962 SLFN5Q08AF3 891 aa16.97■□□□□ 0.31
GGCX-210ENST00000496962 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
GGCX-210ENST00000496962 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
GGCX-210ENST00000496962 PLSCR1O15162 318 aa16.96■□□□□ 0.31
GGCX-210ENST00000496962 FMNL2Q96PY5 1086 aa16.96■□□□□ 0.31
GGCX-210ENST00000496962 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
GGCX-210ENST00000496962 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.3
GGCX-210ENST00000496962 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
GGCX-210ENST00000496962 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
GGCX-210ENST00000496962 ASAP1Q9ULH1 1129 aa16.95■□□□□ 0.3
GGCX-210ENST00000496962 EP400Q96L91 3159 aa16.95■□□□□ 0.3
GGCX-210ENST00000496962 APBA3O96018 575 aa16.94■□□□□ 0.3
GGCX-210ENST00000496962 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
GGCX-210ENST00000496962 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
GGCX-210ENST00000496962 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
GGCX-210ENST00000496962 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
GGCX-210ENST00000496962 PALLDQ8WX93 1383 aa16.93■□□□□ 0.3
GGCX-210ENST00000496962 HOXB7P09629 217 aa16.93■□□□□ 0.3
GGCX-210ENST00000496962 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
GGCX-210ENST00000496962 BTAF1O14981 1849 aa16.92■□□□□ 0.3
GGCX-210ENST00000496962 BAG6P46379 1132 aa16.92■□□□□ 0.3
GGCX-210ENST00000496962 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
GGCX-210ENST00000496962 LOC102724428A0A0B4J2F2 783 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 PTCD1O75127 700 aaKnown RBP16.91■□□□□ 0.3
GGCX-210ENST00000496962 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
GGCX-210ENST00000496962 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
GGCX-210ENST00000496962 SIK1P57059 783 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 SLC27A3Q5K4L6 730 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 DUSP27Q5VZP5 1158 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
GGCX-210ENST00000496962 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
GGCX-210ENST00000496962 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
GGCX-210ENST00000496962 PAPPAQ13219 1627 aa16.91■□□□□ 0.3
GGCX-210ENST00000496962 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
GGCX-210ENST00000496962 KDM3BQ7LBC6 1761 aa16.9■□□□□ 0.3
GGCX-210ENST00000496962 KCNQ3O43525 872 aa16.9■□□□□ 0.3
GGCX-210ENST00000496962 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.29
GGCX-210ENST00000496962 ZNF428Q96B54 188 aa16.89■□□□□ 0.29
GGCX-210ENST00000496962 KCPQ6ZWJ8 1503 aa16.88■□□□□ 0.29
GGCX-210ENST00000496962 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
GGCX-210ENST00000496962 STARD3NLO95772 234 aa16.87■□□□□ 0.29
GGCX-210ENST00000496962 ATP6V1AP38606 617 aa16.87■□□□□ 0.29
GGCX-210ENST00000496962 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
GGCX-210ENST00000496962 ILDR2Q71H61 639 aa16.87■□□□□ 0.29
GGCX-210ENST00000496962 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
GGCX-210ENST00000496962 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
GGCX-210ENST00000496962 ZNF831Q5JPB2 1677 aa16.87■□□□□ 0.29
GGCX-210ENST00000496962 TWISTNBQ3B726 338 aaPredicted RBP16.86■□□□□ 0.29
GGCX-210ENST00000496962 TNS1Q9HBL0 1735 aaKnown RBP16.86■□□□□ 0.29
GGCX-210ENST00000496962 RGPD3A6NKT7 1758 aaPredicted RBP16.86■□□□□ 0.29
GGCX-210ENST00000496962 RGPD4Q7Z3J3 1758 aa16.86■□□□□ 0.29
GGCX-210ENST00000496962 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
GGCX-210ENST00000496962 C8orf58Q8NAV2 365 aa16.85■□□□□ 0.29
GGCX-210ENST00000496962 CAMKK2Q96RR4 588 aa16.85■□□□□ 0.29
GGCX-210ENST00000496962 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
GGCX-210ENST00000496962 LY75O60449 1722 aa16.84■□□□□ 0.29
GGCX-210ENST00000496962 VAMP4O75379 141 aa16.83■□□□□ 0.28
GGCX-210ENST00000496962 RC3H1Q5TC82 1133 aaKnown RBP16.83■□□□□ 0.28
GGCX-210ENST00000496962 CCDC30Q5VVM6 783 aa16.83■□□□□ 0.28
GGCX-210ENST00000496962 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
GGCX-210ENST00000496962 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
GGCX-210ENST00000496962 CICQ96RK0 1608 aaPredicted RBP16.82■□□□□ 0.28
GGCX-210ENST00000496962 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
GGCX-210ENST00000496962 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
GGCX-210ENST00000496962 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
GGCX-210ENST00000496962 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
GGCX-210ENST00000496962 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
GGCX-210ENST00000496962 ADRA2BP18089 450 aa16.81■□□□□ 0.28
GGCX-210ENST00000496962 KRT24Q2M2I5 525 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms