RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SLC16A10Q8TF71 515 aa10.66□□□□□ -0.7
SRRM1-220ENST00000496882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.78e-8■■■□□ 14.7
SRRM1-220ENST00000496882 CASZ1Q86V15 1759 aa10.66□□□□□ -0.7
SRRM1-220ENST00000496882 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
SRRM1-220ENST00000496882 KIF7Q2M1P5 1343 aa10.65□□□□□ -0.7
SRRM1-220ENST00000496882 CYP27B1O15528 508 aa10.65□□□□□ -0.7
SRRM1-220ENST00000496882 POLD1P28340 1107 aa10.65□□□□□ -0.7
SRRM1-220ENST00000496882 NUBP1P53384 320 aa10.65□□□□□ -0.7
SRRM1-220ENST00000496882 RNF25Q96BH1 459 aaPredicted RBP10.65□□□□□ -0.7
SRRM1-220ENST00000496882 PDGFDQ9GZP0 370 aaPredicted RBP10.65□□□□□ -0.7
SRRM1-220ENST00000496882 NCAPD2Q15021 1401 aa10.65□□□□□ -0.7
SRRM1-220ENST00000496882 PAPPAQ13219 1627 aa10.65□□□□□ -0.7
SRRM1-220ENST00000496882 PALLDQ8WX93 1383 aa10.65□□□□□ -0.71
SRRM1-220ENST00000496882 PLEKHG2Q9H7P9 1386 aa10.65□□□□□ -0.71
SRRM1-220ENST00000496882 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
SRRM1-220ENST00000496882 HSP90AB1P08238 724 aaKnown RBP10.64□□□□□ -0.71
SRRM1-220ENST00000496882 NBR1Q14596 966 aa10.64□□□□□ -0.71
SRRM1-220ENST00000496882 PLEKHO1Q53GL0 409 aaPredicted RBP10.64□□□□□ -0.71
SRRM1-220ENST00000496882 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
SRRM1-220ENST00000496882 TMOD3Q9NYL9 352 aa10.64□□□□□ -0.71
SRRM1-220ENST00000496882 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
SRRM1-220ENST00000496882 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
SRRM1-220ENST00000496882 PTGER2P43116 358 aa10.63□□□□□ -0.71
SRRM1-220ENST00000496882 KCNQ4P56696 695 aa10.63□□□□□ -0.71
SRRM1-220ENST00000496882 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
SRRM1-220ENST00000496882 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
SRRM1-220ENST00000496882 PHKG2P15735 406 aa10.62□□□□□ -0.71
SRRM1-220ENST00000496882 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
SRRM1-220ENST00000496882 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
SRRM1-220ENST00000496882 FLAD1Q8NFF5 587 aa10.62□□□□□ -0.71
SRRM1-220ENST00000496882 AK7Q96M32 723 aa10.62□□□□□ -0.71
SRRM1-220ENST00000496882 ARXQ96QS3 562 aa10.62□□□□□ -0.71
SRRM1-220ENST00000496882 LY75O60449 1722 aa10.61□□□□□ -0.71
SRRM1-220ENST00000496882 PNPLA7Q6ZV29 1317 aa10.61□□□□□ -0.71
SRRM1-220ENST00000496882 ZNF530Q6P9A1 599 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-220ENST00000496882 FHDC1Q9C0D6 1143 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-220ENST00000496882 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
SRRM1-220ENST00000496882 PIGBQ92521 554 aa10.6□□□□□ -0.71
SRRM1-220ENST00000496882 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
SRRM1-220ENST00000496882 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
SRRM1-220ENST00000496882 QSER1Q2KHR3 1735 aa10.59□□□□□ -0.71
SRRM1-220ENST00000496882 ERVV-2B6SEH9 535 aa10.59□□□□□ -0.71
SRRM1-220ENST00000496882 CABP4P57796 275 aa10.59□□□□□ -0.71
SRRM1-220ENST00000496882 CNGB1Q14028 1251 aaPredicted RBP10.59□□□□□ -0.71
SRRM1-220ENST00000496882 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
SRRM1-220ENST00000496882 SYT17Q9BSW7 474 aa10.59□□□□□ -0.71
SRRM1-220ENST00000496882 LOC102724428A0A0B4J2F2 783 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 YY1P25490 414 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 ATP6V1AP38606 617 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 MTHFSP49914 203 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 SIK1P57059 783 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 SGIP1Q9BQI5 828 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 TOGARAM1Q9Y4F4 1720 aa10.58□□□□□ -0.72
SRRM1-220ENST00000496882 C5P01031 1676 aa10.57□□□□□ -0.72
SRRM1-220ENST00000496882 ITGB4P16144 1822 aa10.57□□□□□ -0.72
SRRM1-220ENST00000496882 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
SRRM1-220ENST00000496882 IL13P35225 146 aa10.57□□□□□ -0.72
SRRM1-220ENST00000496882 COL23A1Q86Y22 540 aaPredicted RBP10.57□□□□□ -0.72
SRRM1-220ENST00000496882 AEBP1Q8IUX7 1158 aa10.57□□□□□ -0.72
SRRM1-220ENST00000496882 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
SRRM1-220ENST00000496882 STK25O00506 426 aa10.56□□□□□ -0.72
SRRM1-220ENST00000496882 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
SRRM1-220ENST00000496882 PHF14O94880 888 aa10.56□□□□□ -0.72
SRRM1-220ENST00000496882 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
SRRM1-220ENST00000496882 RBM42Q9BTD8 480 aaKnown RBP10.56□□□□□ -0.72
SRRM1-220ENST00000496882 ASAP1Q9ULH1 1129 aa10.56□□□□□ -0.72
SRRM1-220ENST00000496882 CLEC11AQ9Y240 323 aa10.56□□□□□ -0.72
SRRM1-220ENST00000496882 NPC1L1Q9UHC9 1359 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 SSFA2P28290 1259 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 GPR162Q16538 588 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 MSL1Q68DK7 614 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
SRRM1-220ENST00000496882 CFAP53Q96M91 514 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
SRRM1-220ENST00000496882 KDRP35968 1356 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 TUBGCP6Q96RT7 1819 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.54□□□□□ -0.72
SRRM1-220ENST00000496882 GNPATO15228 680 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 HMOX1P09601 288 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 AKAP4Q5JQC9 854 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 LINC00116Q8NCU8 138 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
SRRM1-220ENST00000496882 U2SURPO15042 1029 aaKnown RBP10.53□□□□□ -0.72
SRRM1-220ENST00000496882 GTPBP6O43824 516 aaPredicted RBP10.53□□□□□ -0.72
SRRM1-220ENST00000496882 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
SRRM1-220ENST00000496882 TAF1LQ8IZX4 1826 aa10.53□□□□□ -0.72
SRRM1-220ENST00000496882 KDM6AO15550 1401 aaPredicted RBP10.52□□□□□ -0.73
SRRM1-220ENST00000496882 CHRM1P11229 460 aaPredicted RBP10.52□□□□□ -0.73
SRRM1-220ENST00000496882 ITPK1Q13572 414 aa10.52□□□□□ -0.73
SRRM1-220ENST00000496882 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
SRRM1-220ENST00000496882 PTCD1O75127 700 aaKnown RBP10.51□□□□□ -0.73
SRRM1-220ENST00000496882 TRAPPC3LQ5T215 181 aa10.51□□□□□ -0.73
SRRM1-220ENST00000496882 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
SRRM1-220ENST00000496882 RC3H1Q5TC82 1133 aaKnown RBP10.5□□□□□ -0.73
SRRM1-220ENST00000496882 GAS2L2Q8NHY3 880 aa10.5□□□□□ -0.73
SRRM1-220ENST00000496882 SLC52A2Q9HAB3 445 aa10.5□□□□□ -0.73
SRRM1-220ENST00000496882 CD2APQ9Y5K6 639 aa10.5□□□□□ -0.73
SRRM1-220ENST00000496882 CNTNAP4Q9C0A0 1308 aa10.5□□□□□ -0.73
SRRM1-220ENST00000496882 RNMTO43148 476 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms