RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 PTPN5P54829 565 aa11.67□□□□□ -0.54
ITGAV-208ENST00000496854 VPS72Q15906 364 aa11.67□□□□□ -0.54
ITGAV-208ENST00000496854 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
ITGAV-208ENST00000496854 DEFB132Q7Z7B7 95 aa11.67□□□□□ -0.54
ITGAV-208ENST00000496854 ZFRQ96KR1 1074 aaKnown RBP11.67□□□□□ -0.54
ITGAV-208ENST00000496854 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
ITGAV-208ENST00000496854 FCHSD2O94868 740 aa11.66□□□□□ -0.54
ITGAV-208ENST00000496854 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
ITGAV-208ENST00000496854 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
ITGAV-208ENST00000496854 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
ITGAV-208ENST00000496854 TATDN2Q93075 761 aa11.66□□□□□ -0.54
ITGAV-208ENST00000496854 TRAK1Q9UPV9 953 aa11.66□□□□□ -0.54
ITGAV-208ENST00000496854 MINK1Q8N4C8 1332 aaPredicted RBP11.65□□□□□ -0.54
ITGAV-208ENST00000496854 ACIN1Q9UKV3 1341 aaKnown RBP11.65□□□□□ -0.54
ITGAV-208ENST00000496854 PSME1Q06323 249 aa11.65□□□□□ -0.54
ITGAV-208ENST00000496854 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
ITGAV-208ENST00000496854 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
ITGAV-208ENST00000496854 POGKQ9P215 609 aa11.65□□□□□ -0.54
ITGAV-208ENST00000496854 EIF3AQ14152 1382 aaKnown RBP11.65□□□□□ -0.55
ITGAV-208ENST00000496854 KIAA1210Q9ULL0 1709 aa11.64□□□□□ -0.55
ITGAV-208ENST00000496854 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
ITGAV-208ENST00000496854 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
ITGAV-208ENST00000496854 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
ITGAV-208ENST00000496854 TTC13Q8NBP0 860 aa11.63□□□□□ -0.55
ITGAV-208ENST00000496854 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
ITGAV-208ENST00000496854 GPRASP1Q5JY77 1395 aa11.62□□□□□ -0.55
ITGAV-208ENST00000496854 WASLO00401 505 aaPredicted RBP11.61□□□□□ -0.55
ITGAV-208ENST00000496854 BCAMP50895 628 aa11.61□□□□□ -0.55
ITGAV-208ENST00000496854 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
ITGAV-208ENST00000496854 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
ITGAV-208ENST00000496854 BTG4Q9NY30 223 aa11.61□□□□□ -0.55
ITGAV-208ENST00000496854 RREB1Q92766 1687 aa11.61□□□□□ -0.55
ITGAV-208ENST00000496854 QRICH2Q9H0J4 1663 aa11.6□□□□□ -0.55
ITGAV-208ENST00000496854 A0A0G2JS52 829 aa11.6□□□□□ -0.55
ITGAV-208ENST00000496854 SOWAHBA6NEL2 793 aa11.6□□□□□ -0.55
ITGAV-208ENST00000496854 MYT1Q01538 1121 aa11.6□□□□□ -0.55
ITGAV-208ENST00000496854 GPIHBP1Q8IV16 184 aa11.6□□□□□ -0.55
ITGAV-208ENST00000496854 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
ITGAV-208ENST00000496854 LRCH3Q96II8 777 aa11.59□□□□□ -0.55
ITGAV-208ENST00000496854 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
ITGAV-208ENST00000496854 DISP2A7MBM2 1401 aa11.59□□□□□ -0.55
ITGAV-208ENST00000496854 SPATA31A5Q5VU36 1347 aa11.59□□□□□ -0.55
ITGAV-208ENST00000496854 SPATA31A7Q8IWB4 1347 aa11.59□□□□□ -0.55
ITGAV-208ENST00000496854 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
ITGAV-208ENST00000496854 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
ITGAV-208ENST00000496854 HIC1Q14526 733 aa11.58□□□□□ -0.56
ITGAV-208ENST00000496854 FAM182BQ5T319 152 aa11.58□□□□□ -0.56
ITGAV-208ENST00000496854 WNK3Q9BYP7 1800 aa11.58□□□□□ -0.56
ITGAV-208ENST00000496854 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
ITGAV-208ENST00000496854 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
ITGAV-208ENST00000496854 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
ITGAV-208ENST00000496854 NGDNQ8NEJ9 315 aaKnown RBP11.56□□□□□ -0.56
ITGAV-208ENST00000496854 PRDM11Q9NQV5 511 aa11.56□□□□□ -0.56
ITGAV-208ENST00000496854 PARP4Q9UKK3 1724 aaKnown RBP11.56□□□□□ -0.56
ITGAV-208ENST00000496854 LRRC37A3O60309 1634 aa11.56□□□□□ -0.56
ITGAV-208ENST00000496854 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
ITGAV-208ENST00000496854 SSH2Q76I76 1423 aa11.55□□□□□ -0.56
ITGAV-208ENST00000496854 GNPATO15228 680 aa11.55□□□□□ -0.56
ITGAV-208ENST00000496854 BAG6P46379 1132 aa11.55□□□□□ -0.56
ITGAV-208ENST00000496854 CHRNA2Q15822 529 aa11.55□□□□□ -0.56
ITGAV-208ENST00000496854 PIK3C2AO00443 1686 aa11.55□□□□□ -0.56
ITGAV-208ENST00000496854 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
ITGAV-208ENST00000496854 NUDT16Q96DE0 195 aaKnown RBP11.54□□□□□ -0.56
ITGAV-208ENST00000496854 EYA1Q99502 592 aa11.54□□□□□ -0.56
ITGAV-208ENST00000496854 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
ITGAV-208ENST00000496854 SPATA31A1Q5TZJ5 1347 aa11.54□□□□□ -0.56
ITGAV-208ENST00000496854 TRPM1Q7Z4N2 1603 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 PEAK1Q9H792 1746 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 GPR37O15354 613 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 RNF40O75150 1001 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 SLIT3O75094 1523 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 USP19O94966 1318 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 ACEP12821 1306 aa11.53□□□□□ -0.56
ITGAV-208ENST00000496854 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.56
ITGAV-208ENST00000496854 COL5A2P05997 1499 aaPredicted RBP11.52□□□□□ -0.56
ITGAV-208ENST00000496854 FECHP22830 423 aa11.52□□□□□ -0.57
ITGAV-208ENST00000496854 HRCP23327 699 aa11.52□□□□□ -0.57
ITGAV-208ENST00000496854 STRN4Q9NRL3 753 aa11.52□□□□□ -0.57
ITGAV-208ENST00000496854 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
ITGAV-208ENST00000496854 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
ITGAV-208ENST00000496854 ZC3H6P61129 1189 aaKnown RBP11.51□□□□□ -0.57
ITGAV-208ENST00000496854 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
ITGAV-208ENST00000496854 CPDO75976 1380 aa11.51□□□□□ -0.57
ITGAV-208ENST00000496854 RGPD3A6NKT7 1758 aaPredicted RBP11.51□□□□□ -0.57
ITGAV-208ENST00000496854 RGPD4Q7Z3J3 1758 aa11.51□□□□□ -0.57
ITGAV-208ENST00000496854 COL18A1P39060 1754 aa11.5□□□□□ -0.57
ITGAV-208ENST00000496854 AKAP12Q02952 1782 aa11.5□□□□□ -0.57
ITGAV-208ENST00000496854 PPP4CP60510 307 aa11.5□□□□□ -0.57
ITGAV-208ENST00000496854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
ITGAV-208ENST00000496854 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
ITGAV-208ENST00000496854 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
ITGAV-208ENST00000496854 NBPF1Q3BBV0 1214 aa11.49□□□□□ -0.57
ITGAV-208ENST00000496854 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
ITGAV-208ENST00000496854 PLA2G2EQ9NZK7 142 aa11.49□□□□□ -0.57
ITGAV-208ENST00000496854 USP6P35125 1406 aa11.49□□□□□ -0.57
ITGAV-208ENST00000496854 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
ITGAV-208ENST00000496854 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
ITGAV-208ENST00000496854 OATP04181 439 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms