RNA–Protein interactions for RNA: ENST00000496675.1

PCNX2-216, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-216ENST00000496675 CTCFP49711 727 aaPredicted RBP24.7■■□□□ 1.54
PCNX2-216ENST00000496675 NBPF6Q5VWK0 638 aa24.7■■□□□ 1.54
PCNX2-216ENST00000496675 USHBP1Q8N6Y0 703 aa24.7■■□□□ 1.54
PCNX2-216ENST00000496675 TMC1Q8TDI8 760 aa24.7■■□□□ 1.54
PCNX2-216ENST00000496675 AIDAQ96BJ3 306 aa24.7■■□□□ 1.54
PCNX2-216ENST00000496675 NBPF4Q96M43 638 aa24.7■■□□□ 1.54
PCNX2-216ENST00000496675 PARP3Q9Y6F1 533 aa24.7■■□□□ 1.54
PCNX2-216ENST00000496675 MAP3K19Q56UN5 1328 aa24.69■■□□□ 1.54
PCNX2-216ENST00000496675 ZC3H4Q9UPT8 1303 aaKnown RBP24.69■■□□□ 1.54
PCNX2-216ENST00000496675 MLLT1Q03111 559 aaPredicted RBP24.69■■□□□ 1.54
PCNX2-216ENST00000496675 TRAPPC3LQ5T215 181 aa24.69■■□□□ 1.54
PCNX2-216ENST00000496675 PIGBQ92521 554 aa24.69■■□□□ 1.54
PCNX2-216ENST00000496675 GLTPD2A6NH11 291 aa24.68■■□□□ 1.54
PCNX2-216ENST00000496675 SBF1O95248 1867 aa24.68■■□□□ 1.54
PCNX2-216ENST00000496675 EDC4Q6P2E9 1401 aaKnown RBP24.68■■□□□ 1.54
PCNX2-216ENST00000496675 CD163L1Q9NR16 1453 aa24.67■■□□□ 1.54
PCNX2-216ENST00000496675 ABHD8Q96I13 439 aa24.67■■□□□ 1.54
PCNX2-216ENST00000496675 CREBZFQ9NS37 354 aa24.67■■□□□ 1.54
PCNX2-216ENST00000496675 ITGB4P16144 1822 aa24.66■■□□□ 1.54
PCNX2-216ENST00000496675 ATP6V1AP38606 617 aa24.66■■□□□ 1.54
PCNX2-216ENST00000496675 C4AP0C0L4 1744 aa24.65■■□□□ 1.54
PCNX2-216ENST00000496675 RTCBQ9Y3I0 505 aaKnown RBP24.65■■□□□ 1.54
PCNX2-216ENST00000496675 CYP27B1O15528 508 aa24.64■■□□□ 1.54
PCNX2-216ENST00000496675 ITPK1Q13572 414 aa24.64■■□□□ 1.54
PCNX2-216ENST00000496675 MAP2P11137 1827 aaKnown RBP24.63■■□□□ 1.53
PCNX2-216ENST00000496675 COG3Q96JB2 828 aa24.62■■□□□ 1.53
PCNX2-216ENST00000496675 SLC12A5Q9H2X9 1139 aa24.62■■□□□ 1.53
PCNX2-216ENST00000496675 TERF2IPQ9NYB0 399 aa24.62■■□□□ 1.53
PCNX2-216ENST00000496675 FBLN1P23142 703 aa24.61■■□□□ 1.53
PCNX2-216ENST00000496675 LBX1P52954 281 aa24.61■■□□□ 1.53
PCNX2-216ENST00000496675 GYS1P13807 737 aa24.6■■□□□ 1.53
PCNX2-216ENST00000496675 ARHGEF1Q92888 912 aaKnown RBP24.6■■□□□ 1.53
PCNX2-216ENST00000496675 LMNB1P20700 586 aa24.59■■□□□ 1.53
PCNX2-216ENST00000496675 RFC4P35249 363 aa24.59■■□□□ 1.53
PCNX2-216ENST00000496675 RASSF7Q02833 373 aa24.59■■□□□ 1.53
PCNX2-216ENST00000496675 SMG6Q86US8 1419 aaKnown RBP24.59■■□□□ 1.53
PCNX2-216ENST00000496675 ADRA2BP18089 450 aa24.58■■□□□ 1.53
PCNX2-216ENST00000496675 ASAP1Q9ULH1 1129 aa24.58■■□□□ 1.53
PCNX2-216ENST00000496675 CNTNAP1P78357 1384 aa24.57■■□□□ 1.52
PCNX2-216ENST00000496675 CHRNA5P30532 468 aa24.57■■□□□ 1.52
PCNX2-216ENST00000496675 TMOD3Q9NYL9 352 aa24.57■■□□□ 1.52
PCNX2-216ENST00000496675 CCDC85CA6NKD9 419 aa24.56■■□□□ 1.52
PCNX2-216ENST00000496675 RTL1A6NKG5 1358 aa24.55■■□□□ 1.52
PCNX2-216ENST00000496675 RGS19P49795 217 aa24.55■■□□□ 1.52
PCNX2-216ENST00000496675 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
PCNX2-216ENST00000496675 KDM6AO15550 1401 aaPredicted RBP24.54■■□□□ 1.52
PCNX2-216ENST00000496675 POTECB2RU33 542 aa24.54■■□□□ 1.52
PCNX2-216ENST00000496675 CHADLQ6NUI6 762 aa24.54■■□□□ 1.52
PCNX2-216ENST00000496675 NKX1-1Q15270 411 aaPredicted RBP24.53■■□□□ 1.52
PCNX2-216ENST00000496675 DPY19L2Q6NUT2 758 aa24.53■■□□□ 1.52
PCNX2-216ENST00000496675 WBP1LQ9NX94 342 aa24.53■■□□□ 1.52
PCNX2-216ENST00000496675 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
PCNX2-216ENST00000496675 RRS1Q15050 365 aaKnown RBP24.52■■□□□ 1.52
PCNX2-216ENST00000496675 VEGFBP49765 207 aa24.51■■□□□ 1.51
PCNX2-216ENST00000496675 RC3H1Q5TC82 1133 aaKnown RBP24.5■■□□□ 1.51
PCNX2-216ENST00000496675 RPS6KA4O75676 772 aa24.49■■□□□ 1.51
PCNX2-216ENST00000496675 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
PCNX2-216ENST00000496675 SPG7Q9UQ90 795 aa24.48■■□□□ 1.51
PCNX2-216ENST00000496675 HSPA8P11142 646 aaKnown RBP24.47■■□□□ 1.51
PCNX2-216ENST00000496675 DDR1Q08345 913 aa24.45■■□□□ 1.5
PCNX2-216ENST00000496675 RBM42Q9BTD8 480 aaKnown RBP24.45■■□□□ 1.5
PCNX2-216ENST00000496675 TIAM2Q8IVF5 1701 aa24.44■■□□□ 1.5
PCNX2-216ENST00000496675 CNTNAP4Q9C0A0 1308 aa24.44■■□□□ 1.5
PCNX2-216ENST00000496675 HSP90AB2PQ58FF8 381 aa24.44■■□□□ 1.5
PCNX2-216ENST00000496675 L3MBTL2Q969R5 705 aa24.44■■□□□ 1.5
PCNX2-216ENST00000496675 CCDC88AQ3V6T2 1871 aa24.43■■□□□ 1.5
PCNX2-216ENST00000496675 FKBP8Q14318 412 aa24.43■■□□□ 1.5
PCNX2-216ENST00000496675 INSRP06213 1382 aa24.42■■□□□ 1.5
PCNX2-216ENST00000496675 TMEM88BA6NKF7 163 aa24.42■■□□□ 1.5
PCNX2-216ENST00000496675 POTEIP0CG38 1075 aa24.41■■□□□ 1.5
PCNX2-216ENST00000496675 POTEJP0CG39 1038 aa24.41■■□□□ 1.5
PCNX2-216ENST00000496675 SLC4A9Q96Q91 983 aa24.41■■□□□ 1.5
PCNX2-216ENST00000496675 SRP68Q9UHB9 627 aaKnown RBP24.41■■□□□ 1.5
PCNX2-216ENST00000496675 KDRP35968 1356 aa24.41■■□□□ 1.5
PCNX2-216ENST00000496675 MAP2K1Q02750 393 aaPredicted RBP24.4■■□□□ 1.5
PCNX2-216ENST00000496675 CFAP44Q96MT7 982 aa24.4■■□□□ 1.5
PCNX2-216ENST00000496675 PASKQ96RG2 1323 aa24.39■■□□□ 1.5
PCNX2-216ENST00000496675 TTLL6Q8N841 843 aa24.39■■□□□ 1.49
PCNX2-216ENST00000496675 VIRMAQ69YN4 1812 aaKnown RBP24.39■■□□□ 1.49
PCNX2-216ENST00000496675 POLRMTO00411 1230 aaKnown RBP24.38■■□□□ 1.49
PCNX2-216ENST00000496675 TNRC18O15417 2968 aaPredicted RBP24.38■■□□□ 1.49
PCNX2-216ENST00000496675 PDE4DIPQ5VU43 2346 aa24.37■■□□□ 1.49
PCNX2-216ENST00000496675 NFKBIEO00221 500 aa24.37■■□□□ 1.49
PCNX2-216ENST00000496675 IFNL2Q8IZJ0 200 aa24.37■■□□□ 1.49
PCNX2-216ENST00000496675 USP42Q9H9J4 1324 aaKnown RBP24.36■■□□□ 1.49
PCNX2-216ENST00000496675 ERFEQ4G0M1 354 aa24.36■■□□□ 1.49
PCNX2-216ENST00000496675 PUS7Q96PZ0 661 aaKnown RBP24.36■■□□□ 1.49
PCNX2-216ENST00000496675 FLT4P35916 1363 aa24.36■■□□□ 1.49
PCNX2-216ENST00000496675 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
PCNX2-216ENST00000496675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.35■■□□□ 1.49
PCNX2-216ENST00000496675 ZNF831Q5JPB2 1677 aa24.34■■□□□ 1.49
PCNX2-216ENST00000496675 PHKG2P15735 406 aa24.34■■□□□ 1.49
PCNX2-216ENST00000496675 TM4SF1P30408 202 aa24.34■■□□□ 1.49
PCNX2-216ENST00000496675 LDHDQ86WU2 507 aa24.34■■□□□ 1.49
PCNX2-216ENST00000496675 COL5A3P25940 1745 aaPredicted RBP24.34■■□□□ 1.49
PCNX2-216ENST00000496675 GGNBP2Q9H3C7 697 aa24.33■■□□□ 1.49
PCNX2-216ENST00000496675 MYH14Q7Z406 1995 aaKnown RBP24.33■■□□□ 1.48
PCNX2-216ENST00000496675 DDNO94850 711 aaPredicted RBP24.32■■□□□ 1.48
PCNX2-216ENST00000496675 BEGAINQ9BUH8 593 aa24.31■■□□□ 1.48
PCNX2-216ENST00000496675 WDR33Q9C0J8 1336 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms