RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 CIZ1Q9ULV3 898 aaPredicted RBP18.49■□□□□ 0.55
UBXN11-216ENST00000496466 SLC4A10Q6U841 1118 aa18.48■□□□□ 0.55
UBXN11-216ENST00000496466 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
UBXN11-216ENST00000496466 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
UBXN11-216ENST00000496466 K7ELQ4 463 aaPredicted RBP18.47■□□□□ 0.55
UBXN11-216ENST00000496466 APBB1O00213 710 aa18.47■□□□□ 0.55
UBXN11-216ENST00000496466 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
UBXN11-216ENST00000496466 C1orf167Q5SNV9 1468 aa18.47■□□□□ 0.55
UBXN11-216ENST00000496466 TRAK2O60296 914 aa18.46■□□□□ 0.55
UBXN11-216ENST00000496466 HMMRO75330 724 aa18.46■□□□□ 0.55
UBXN11-216ENST00000496466 RGPD2P0DJD1 1756 aa18.46■□□□□ 0.55
UBXN11-216ENST00000496466 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
UBXN11-216ENST00000496466 SLIT3O75094 1523 aa18.45■□□□□ 0.54
UBXN11-216ENST00000496466 SDSP20132 328 aa18.45■□□□□ 0.54
UBXN11-216ENST00000496466 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
UBXN11-216ENST00000496466 CCDC30Q5VVM6 783 aa18.45■□□□□ 0.54
UBXN11-216ENST00000496466 BABAM1Q9NWV8 329 aa18.45■□□□□ 0.54
UBXN11-216ENST00000496466 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
UBXN11-216ENST00000496466 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
UBXN11-216ENST00000496466 DDX11L8A8MPP1 907 aa18.44■□□□□ 0.54
UBXN11-216ENST00000496466 TNPO1Q92973 898 aaKnown RBP18.44■□□□□ 0.54
UBXN11-216ENST00000496466 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
UBXN11-216ENST00000496466 FLIIQ13045 1269 aa18.44■□□□□ 0.54
UBXN11-216ENST00000496466 RAB3GAP1Q15042 981 aa18.44■□□□□ 0.54
UBXN11-216ENST00000496466 TRPM3Q9HCF6 1732 aaPredicted RBP18.43■□□□□ 0.54
UBXN11-216ENST00000496466 ANKRD24Q8TF21 1146 aa18.43■□□□□ 0.54
UBXN11-216ENST00000496466 AXIN2Q9Y2T1 843 aa18.43■□□□□ 0.54
UBXN11-216ENST00000496466 GNAI2P04899 355 aa18.43■□□□□ 0.54
UBXN11-216ENST00000496466 GZF1Q9H116 711 aaPredicted RBP18.43■□□□□ 0.54
UBXN11-216ENST00000496466 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
UBXN11-216ENST00000496466 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
UBXN11-216ENST00000496466 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
UBXN11-216ENST00000496466 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
UBXN11-216ENST00000496466 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
UBXN11-216ENST00000496466 RABEP1Q15276 862 aa18.41■□□□□ 0.54
UBXN11-216ENST00000496466 DDX17Q92841 729 aaKnown RBP18.41■□□□□ 0.54
UBXN11-216ENST00000496466 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
UBXN11-216ENST00000496466 FSD2A1L4K1 749 aa18.41■□□□□ 0.54
UBXN11-216ENST00000496466 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-216ENST00000496466 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
UBXN11-216ENST00000496466 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
UBXN11-216ENST00000496466 OSBPL3Q9H4L5 887 aa18.4■□□□□ 0.54
UBXN11-216ENST00000496466 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
UBXN11-216ENST00000496466 ATF3P18847 181 aa18.4■□□□□ 0.54
UBXN11-216ENST00000496466 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 KCNQ3O43525 872 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 KIF1AQ12756 1690 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 GNAI3P08754 354 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 PDE1AP54750 535 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 ZC3H6P61129 1189 aaKnown RBP18.39■□□□□ 0.53
UBXN11-216ENST00000496466 GBP4Q96PP9 640 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 MST1RQ04912 1400 aa18.39■□□□□ 0.53
UBXN11-216ENST00000496466 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
UBXN11-216ENST00000496466 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
UBXN11-216ENST00000496466 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
UBXN11-216ENST00000496466 PXDNQ92626 1479 aa18.38■□□□□ 0.53
UBXN11-216ENST00000496466 EXOC6BQ9Y2D4 811 aa18.38■□□□□ 0.53
UBXN11-216ENST00000496466 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
UBXN11-216ENST00000496466 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
UBXN11-216ENST00000496466 HSPA2P54652 639 aa18.37■□□□□ 0.53
UBXN11-216ENST00000496466 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
UBXN11-216ENST00000496466 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
UBXN11-216ENST00000496466 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
UBXN11-216ENST00000496466 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
UBXN11-216ENST00000496466 TEFQ10587 303 aa18.37■□□□□ 0.53
UBXN11-216ENST00000496466 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
UBXN11-216ENST00000496466 XRCC6P12956 609 aaKnown RBP eCLIP18.36■□□□□ 0.53
UBXN11-216ENST00000496466 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
UBXN11-216ENST00000496466 LMO7Q8WWI1 1683 aa18.36■□□□□ 0.53
UBXN11-216ENST00000496466 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
UBXN11-216ENST00000496466 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
UBXN11-216ENST00000496466 C1orf141Q5JVX7 400 aa18.35■□□□□ 0.53
UBXN11-216ENST00000496466 ERC2O15083 957 aa18.35■□□□□ 0.53
UBXN11-216ENST00000496466 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
UBXN11-216ENST00000496466 REC8O95072 547 aa18.35■□□□□ 0.53
UBXN11-216ENST00000496466 N4BP2Q86UW6 1770 aaPredicted RBP18.35■□□□□ 0.53
UBXN11-216ENST00000496466 SSFA2P28290 1259 aa18.34■□□□□ 0.53
UBXN11-216ENST00000496466 ARXQ96QS3 562 aa18.34■□□□□ 0.53
UBXN11-216ENST00000496466 LRRCC1Q9C099 1032 aa18.34■□□□□ 0.53
UBXN11-216ENST00000496466 ALS2Q96Q42 1657 aa18.34■□□□□ 0.53
UBXN11-216ENST00000496466 PXDNLA1KZ92 1463 aa18.34■□□□□ 0.53
UBXN11-216ENST00000496466 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.53
UBXN11-216ENST00000496466 RGPD5Q99666 1765 aa18.33■□□□□ 0.52
UBXN11-216ENST00000496466 PTMSP20962 102 aa18.33■□□□□ 0.52
UBXN11-216ENST00000496466 USP44Q9H0E7 712 aa18.33■□□□□ 0.52
UBXN11-216ENST00000496466 ERBB3P21860 1342 aa18.33■□□□□ 0.52
UBXN11-216ENST00000496466 IBTKQ9P2D0 1353 aaPredicted RBP18.33■□□□□ 0.52
UBXN11-216ENST00000496466 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
UBXN11-216ENST00000496466 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
UBXN11-216ENST00000496466 CABLES1Q8TDN4 633 aa18.32■□□□□ 0.52
UBXN11-216ENST00000496466 CHPF2Q9P2E5 772 aa18.32■□□□□ 0.52
UBXN11-216ENST00000496466 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
UBXN11-216ENST00000496466 CLEC17AQ6ZS10 378 aa18.32■□□□□ 0.52
UBXN11-216ENST00000496466 TUBGCP6Q96RT7 1819 aa18.31■□□□□ 0.52
UBXN11-216ENST00000496466 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
UBXN11-216ENST00000496466 HOXB7P09629 217 aa18.31■□□□□ 0.52
UBXN11-216ENST00000496466 SKOR2Q2VWA4 1001 aaPredicted RBP18.31■□□□□ 0.52
UBXN11-216ENST00000496466 DCCP43146 1447 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 674.9 ms