RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 IL16Q14005 1332 aa11.03□□□□□ -0.64
U2AF1-212ENST00000496462 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
U2AF1-212ENST00000496462 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
U2AF1-212ENST00000496462 MARCH10Q8NA82 808 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-212ENST00000496462 CCNL1Q9UK58 526 aaPredicted RBP11.03□□□□□ -0.64
U2AF1-212ENST00000496462 SNRPA1P09661 255 aaKnown RBP11.02□□□□□ -0.64
U2AF1-212ENST00000496462 SLC52A2Q9HAB3 445 aa11.02□□□□□ -0.64
U2AF1-212ENST00000496462 EIF2S2P20042 333 aaKnown RBP11.02□□□□□ -0.65
U2AF1-212ENST00000496462 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
U2AF1-212ENST00000496462 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.65
U2AF1-212ENST00000496462 MCM10Q7L590 875 aa11.02□□□□□ -0.65
U2AF1-212ENST00000496462 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.65
U2AF1-212ENST00000496462 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
U2AF1-212ENST00000496462 SOS1Q07889 1333 aaPredicted RBP11.02□□□□□ -0.65
U2AF1-212ENST00000496462 ZNF428Q96B54 188 aa11.01□□□□□ -0.65
U2AF1-212ENST00000496462 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.01□□□□□ -0.65
U2AF1-212ENST00000496462 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
U2AF1-212ENST00000496462 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
U2AF1-212ENST00000496462 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
U2AF1-212ENST00000496462 ZPR1O75312 459 aa11□□□□□ -0.65
U2AF1-212ENST00000496462 KCNQ2O43526 872 aa11□□□□□ -0.65
U2AF1-212ENST00000496462 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
U2AF1-212ENST00000496462 PTF1AQ7RTS3 328 aa11□□□□□ -0.65
U2AF1-212ENST00000496462 NFAT5O94916 1531 aa11□□□□□ -0.65
U2AF1-212ENST00000496462 HDGFL1Q5TGJ6 251 aa11□□□□□ -0.65
U2AF1-212ENST00000496462 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
U2AF1-212ENST00000496462 KDRP35968 1356 aa10.99□□□□□ -0.65
U2AF1-212ENST00000496462 RTCBQ9Y3I0 505 aaKnown RBP10.99□□□□□ -0.65
U2AF1-212ENST00000496462 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
U2AF1-212ENST00000496462 MYOM1P52179 1685 aa10.99□□□□□ -0.65
U2AF1-212ENST00000496462 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
U2AF1-212ENST00000496462 TFCP2L1Q9NZI6 479 aa10.99□□□□□ -0.65
U2AF1-212ENST00000496462 ZBED9Q6R2W3 1325 aa10.98□□□□□ -0.65
U2AF1-212ENST00000496462 NRAPQ86VF7 1730 aa10.98□□□□□ -0.65
U2AF1-212ENST00000496462 WWC1Q8IX03 1113 aa10.98□□□□□ -0.65
U2AF1-212ENST00000496462 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
U2AF1-212ENST00000496462 POLD1P28340 1107 aa10.98□□□□□ -0.65
U2AF1-212ENST00000496462 HSP90AB3PQ58FF7 597 aa10.98□□□□□ -0.65
U2AF1-212ENST00000496462 CYP27B1O15528 508 aa10.97□□□□□ -0.65
U2AF1-212ENST00000496462 RFC4P35249 363 aa10.97□□□□□ -0.65
U2AF1-212ENST00000496462 NKX1-1Q15270 411 aaPredicted RBP10.97□□□□□ -0.65
U2AF1-212ENST00000496462 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
U2AF1-212ENST00000496462 DCTN1Q14203 1278 aa10.97□□□□□ -0.65
U2AF1-212ENST00000496462 TWISTNBQ3B726 338 aaPredicted RBP10.97□□□□□ -0.65
U2AF1-212ENST00000496462 ZNF790Q6PG37 636 aa10.97□□□□□ -0.65
U2AF1-212ENST00000496462 HOXB7P09629 217 aa10.97□□□□□ -0.65
U2AF1-212ENST00000496462 SENP3-EIF4A1A0A087X0R7 540 aa10.96□□□□□ -0.65
U2AF1-212ENST00000496462 ELL2O00472 640 aaPredicted RBP10.96□□□□□ -0.65
U2AF1-212ENST00000496462 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.65
U2AF1-212ENST00000496462 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.65
U2AF1-212ENST00000496462 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.66
U2AF1-212ENST00000496462 API5Q9BZZ5 524 aaKnown RBP10.96□□□□□ -0.66
U2AF1-212ENST00000496462 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 LOC102724428A0A0B4J2F2 783 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 SIK1P57059 783 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 HYPKQ9NX55 129 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 DBF4Q9UBU7 674 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-212ENST00000496462 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 TRAPPC3LQ5T215 181 aa10.95□□□□□ -0.66
U2AF1-212ENST00000496462 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 LGR6Q9HBX8 967 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 KIF16BQ96L93 1317 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 ANKRD26Q9UPS8 1709 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 PALLDQ8WX93 1383 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 KCNQ4P56696 695 aa10.94□□□□□ -0.66
U2AF1-212ENST00000496462 FRAT1Q92837 279 aaPredicted RBP10.94□□□□□ -0.66
U2AF1-212ENST00000496462 THUMPD2Q9BTF0 503 aaKnown RBP10.94□□□□□ -0.66
U2AF1-212ENST00000496462 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
U2AF1-212ENST00000496462 TXNRD1Q16881 649 aa10.93□□□□□ -0.66
U2AF1-212ENST00000496462 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
U2AF1-212ENST00000496462 CCDC87Q9NVE4 849 aa10.93□□□□□ -0.66
U2AF1-212ENST00000496462 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
U2AF1-212ENST00000496462 IL17REQ8NFR9 667 aa10.93□□□□□ -0.66
U2AF1-212ENST00000496462 PIGBQ92521 554 aa10.93□□□□□ -0.66
U2AF1-212ENST00000496462 GNPATO15228 680 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 PLEKHF1Q96S99 279 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 EXOSC9Q06265 439 aaKnown RBP10.92□□□□□ -0.66
U2AF1-212ENST00000496462 RGPD5Q99666 1765 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 FAM208AQ9UK61 1670 aaKnown RBP10.92□□□□□ -0.66
U2AF1-212ENST00000496462 PLSCR1O15162 318 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 AIMP1Q12904 312 aaKnown RBP10.92□□□□□ -0.66
U2AF1-212ENST00000496462 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
U2AF1-212ENST00000496462 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
U2AF1-212ENST00000496462 ADRA2BP18089 450 aa10.91□□□□□ -0.66
U2AF1-212ENST00000496462 MAP2P11137 1827 aaKnown RBP10.91□□□□□ -0.66
U2AF1-212ENST00000496462 MEGF6O75095 1541 aa10.91□□□□□ -0.66
U2AF1-212ENST00000496462 THSD7AQ9UPZ6 1657 aa10.91□□□□□ -0.66
U2AF1-212ENST00000496462 CHL1O00533 1208 aa10.91□□□□□ -0.66
U2AF1-212ENST00000496462 MYL6BP14649 208 aa10.9□□□□□ -0.66
U2AF1-212ENST00000496462 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
U2AF1-212ENST00000496462 ZBTB7AO95365 584 aa10.9□□□□□ -0.66
U2AF1-212ENST00000496462 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
U2AF1-212ENST00000496462 ASAP1Q9ULH1 1129 aa10.9□□□□□ -0.66
U2AF1-212ENST00000496462 PHF14O94880 888 aa10.9□□□□□ -0.67
U2AF1-212ENST00000496462 LTN1O94822 1766 aa10.9□□□□□ -0.67
U2AF1-212ENST00000496462 DISP2A7MBM2 1401 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms