RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 POLD1P28340 1107 aa15.94■□□□□ 0.14
THBS3-208ENST00000496332 ITPK1Q13572 414 aa15.94■□□□□ 0.14
THBS3-208ENST00000496332 NFATC2IPQ8NCF5 419 aa15.94■□□□□ 0.14
THBS3-208ENST00000496332 SYT17Q9BSW7 474 aa15.94■□□□□ 0.14
THBS3-208ENST00000496332 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
THBS3-208ENST00000496332 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
THBS3-208ENST00000496332 PPP2R1AP30153 589 aa15.93■□□□□ 0.14
THBS3-208ENST00000496332 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
THBS3-208ENST00000496332 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
THBS3-208ENST00000496332 TAF1LQ8IZX4 1826 aa15.92■□□□□ 0.14
THBS3-208ENST00000496332 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
THBS3-208ENST00000496332 PHF14O94880 888 aa15.92■□□□□ 0.14
THBS3-208ENST00000496332 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
THBS3-208ENST00000496332 AMIGO3Q86WK7 504 aa15.92■□□□□ 0.14
THBS3-208ENST00000496332 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
THBS3-208ENST00000496332 MSL1Q68DK7 614 aa15.91■□□□□ 0.14
THBS3-208ENST00000496332 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
THBS3-208ENST00000496332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
THBS3-208ENST00000496332 GNPATO15228 680 aa15.89■□□□□ 0.13
THBS3-208ENST00000496332 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
THBS3-208ENST00000496332 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
THBS3-208ENST00000496332 SSFA2P28290 1259 aa15.89■□□□□ 0.13
THBS3-208ENST00000496332 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
THBS3-208ENST00000496332 SLC52A2Q9HAB3 445 aa15.89■□□□□ 0.13
THBS3-208ENST00000496332 MAP3K5Q99683 1374 aa15.88■□□□□ 0.13
THBS3-208ENST00000496332 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
THBS3-208ENST00000496332 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
THBS3-208ENST00000496332 RC3H1Q5TC82 1133 aaKnown RBP15.86■□□□□ 0.13
THBS3-208ENST00000496332 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
THBS3-208ENST00000496332 SCN11AQ9UI33 1791 aa15.85■□□□□ 0.13
THBS3-208ENST00000496332 UBR3Q6ZT12 1888 aa15.85■□□□□ 0.13
THBS3-208ENST00000496332 U2AF1L5P0DN76 240 aaPredicted RBP15.85■□□□□ 0.13
THBS3-208ENST00000496332 PRKAR2BP31323 418 aa15.85■□□□□ 0.13
THBS3-208ENST00000496332 U2AF1Q01081 240 aaKnown RBP eCLIP15.85■□□□□ 0.13
THBS3-208ENST00000496332 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
THBS3-208ENST00000496332 RSPH6AQ9H0K4 717 aa15.85■□□□□ 0.13
THBS3-208ENST00000496332 RTCBQ9Y3I0 505 aaKnown RBP15.85■□□□□ 0.13
THBS3-208ENST00000496332 ZNF831Q5JPB2 1677 aa15.84■□□□□ 0.13
THBS3-208ENST00000496332 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
THBS3-208ENST00000496332 SLC39A6Q13433 755 aa15.84■□□□□ 0.13
THBS3-208ENST00000496332 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
THBS3-208ENST00000496332 CNTNAP4Q9C0A0 1308 aa15.84■□□□□ 0.13
THBS3-208ENST00000496332 MRC1P22897 1456 aa15.84■□□□□ 0.13
THBS3-208ENST00000496332 UTRNP46939 3433 aa15.83■□□□□ 0.13
THBS3-208ENST00000496332 IL17REQ8NFR9 667 aa15.83■□□□□ 0.12
THBS3-208ENST00000496332 NLGN2Q8NFZ4 835 aa15.83■□□□□ 0.12
THBS3-208ENST00000496332 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
THBS3-208ENST00000496332 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
THBS3-208ENST00000496332 FCHSD2O94868 740 aa15.81■□□□□ 0.12
THBS3-208ENST00000496332 ADRA2BP18089 450 aa15.81■□□□□ 0.12
THBS3-208ENST00000496332 YY1P25490 414 aa15.81■□□□□ 0.12
THBS3-208ENST00000496332 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
THBS3-208ENST00000496332 TEFQ10587 303 aa15.81■□□□□ 0.12
THBS3-208ENST00000496332 DDX10Q13206 875 aaKnown RBP15.81■□□□□ 0.12
THBS3-208ENST00000496332 ADAMTS7Q9UKP4 1686 aa15.81■□□□□ 0.12
THBS3-208ENST00000496332 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
THBS3-208ENST00000496332 RFC4P35249 363 aa15.8■□□□□ 0.12
THBS3-208ENST00000496332 GPR162Q16538 588 aa15.8■□□□□ 0.12
THBS3-208ENST00000496332 DNAJC10Q8IXB1 793 aa15.8■□□□□ 0.12
THBS3-208ENST00000496332 INTS5Q6P9B9 1019 aaKnown RBP15.79■□□□□ 0.12
THBS3-208ENST00000496332 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
THBS3-208ENST00000496332 CD2APQ9Y5K6 639 aa15.79■□□□□ 0.12
THBS3-208ENST00000496332 TTC5Q8N0Z6 440 aa15.78■□□□□ 0.12
THBS3-208ENST00000496332 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
THBS3-208ENST00000496332 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
THBS3-208ENST00000496332 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
THBS3-208ENST00000496332 TJP1Q07157 1748 aa15.77■□□□□ 0.12
THBS3-208ENST00000496332 MMP10P09238 476 aa15.77■□□□□ 0.12
THBS3-208ENST00000496332 CYP19A1P11511 503 aaPredicted RBP15.77■□□□□ 0.12
THBS3-208ENST00000496332 RALBP1Q15311 655 aa15.77■□□□□ 0.12
THBS3-208ENST00000496332 VSIG10Q8N0Z9 540 aa15.77■□□□□ 0.12
THBS3-208ENST00000496332 CCDC87Q9NVE4 849 aa15.77■□□□□ 0.12
THBS3-208ENST00000496332 CEMIPQ8WUJ3 1361 aa15.76■□□□□ 0.11
THBS3-208ENST00000496332 GYS1P13807 737 aa15.76■□□□□ 0.11
THBS3-208ENST00000496332 ZNF790Q6PG37 636 aa15.76■□□□□ 0.11
THBS3-208ENST00000496332 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
THBS3-208ENST00000496332 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
THBS3-208ENST00000496332 VIRMAQ69YN4 1812 aaKnown RBP15.75■□□□□ 0.11
THBS3-208ENST00000496332 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
THBS3-208ENST00000496332 MCM10Q7L590 875 aa15.75■□□□□ 0.11
THBS3-208ENST00000496332 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
THBS3-208ENST00000496332 BTBD11A6QL63 1104 aa15.74■□□□□ 0.11
THBS3-208ENST00000496332 ZNF496Q96IT1 587 aaPredicted RBP15.74■□□□□ 0.11
THBS3-208ENST00000496332 USP42Q9H9J4 1324 aaKnown RBP15.73■□□□□ 0.11
THBS3-208ENST00000496332 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
THBS3-208ENST00000496332 STARD3NLO95772 234 aa15.73■□□□□ 0.11
THBS3-208ENST00000496332 NEFMP07197 916 aa15.73■□□□□ 0.11
THBS3-208ENST00000496332 ZBTB1Q9Y2K1 713 aa15.73■□□□□ 0.11
THBS3-208ENST00000496332 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
THBS3-208ENST00000496332 KCNQ3O43525 872 aa15.72■□□□□ 0.11
THBS3-208ENST00000496332 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
THBS3-208ENST00000496332 DCTN1Q14203 1278 aa15.72■□□□□ 0.11
THBS3-208ENST00000496332 FKBP8Q14318 412 aa15.72■□□□□ 0.11
THBS3-208ENST00000496332 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
THBS3-208ENST00000496332 PLEKHF1Q96S99 279 aa15.72■□□□□ 0.11
THBS3-208ENST00000496332 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
THBS3-208ENST00000496332 ZPR1O75312 459 aa15.71■□□□□ 0.11
THBS3-208ENST00000496332 CANXP27824 592 aaKnown RBP15.71■□□□□ 0.11
THBS3-208ENST00000496332 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
THBS3-208ENST00000496332 PARP3Q9Y6F1 533 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms