RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.24
TRIM59-207ENST00000496222 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
TRIM59-207ENST00000496222 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
TRIM59-207ENST00000496222 MRC1P22897 1456 aa16.57■□□□□ 0.24
TRIM59-207ENST00000496222 CABP4P57796 275 aa16.57■□□□□ 0.24
TRIM59-207ENST00000496222 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
TRIM59-207ENST00000496222 COL23A1Q86Y22 540 aaPredicted RBP16.57■□□□□ 0.24
TRIM59-207ENST00000496222 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
TRIM59-207ENST00000496222 SLC16A10Q8TF71 515 aa16.57■□□□□ 0.24
TRIM59-207ENST00000496222 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
TRIM59-207ENST00000496222 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
TRIM59-207ENST00000496222 RNMTO43148 476 aaKnown RBP16.56■□□□□ 0.24
TRIM59-207ENST00000496222 MSH5O43196 834 aa16.56■□□□□ 0.24
TRIM59-207ENST00000496222 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
TRIM59-207ENST00000496222 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
TRIM59-207ENST00000496222 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
TRIM59-207ENST00000496222 ADRA2BP18089 450 aa16.54■□□□□ 0.24
TRIM59-207ENST00000496222 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
TRIM59-207ENST00000496222 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
TRIM59-207ENST00000496222 HMGB2P26583 209 aaKnown RBP16.53■□□□□ 0.24
TRIM59-207ENST00000496222 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
TRIM59-207ENST00000496222 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
TRIM59-207ENST00000496222 NUDCQ9Y266 331 aa16.53■□□□□ 0.24
TRIM59-207ENST00000496222 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.24
TRIM59-207ENST00000496222 FCHSD2O94868 740 aa16.52■□□□□ 0.24
TRIM59-207ENST00000496222 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
TRIM59-207ENST00000496222 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
TRIM59-207ENST00000496222 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
TRIM59-207ENST00000496222 GOLGB1Q14789 3259 aaKnown RBP16.51■□□□□ 0.23
TRIM59-207ENST00000496222 U2AF1L5P0DN76 240 aaPredicted RBP16.51■□□□□ 0.23
TRIM59-207ENST00000496222 U2AF1Q01081 240 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRIM59-207ENST00000496222 RALBP1Q15311 655 aa16.51■□□□□ 0.23
TRIM59-207ENST00000496222 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
TRIM59-207ENST00000496222 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
TRIM59-207ENST00000496222 UTRNP46939 3433 aa16.51■□□□□ 0.23
TRIM59-207ENST00000496222 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
TRIM59-207ENST00000496222 AK7Q96M32 723 aa16.5■□□□□ 0.23
TRIM59-207ENST00000496222 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
TRIM59-207ENST00000496222 SIPA1L3O60292 1781 aaPredicted RBP16.5■□□□□ 0.23
TRIM59-207ENST00000496222 TJP1Q07157 1748 aa16.5■□□□□ 0.23
TRIM59-207ENST00000496222 CEMIPQ8WUJ3 1361 aa16.5■□□□□ 0.23
TRIM59-207ENST00000496222 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
TRIM59-207ENST00000496222 GNAT3A8MTJ3 354 aa16.49■□□□□ 0.23
TRIM59-207ENST00000496222 PTCD1O75127 700 aaKnown RBP16.49■□□□□ 0.23
TRIM59-207ENST00000496222 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
TRIM59-207ENST00000496222 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
TRIM59-207ENST00000496222 FLAD1Q8NFF5 587 aa16.49■□□□□ 0.23
TRIM59-207ENST00000496222 ARXQ96QS3 562 aa16.49■□□□□ 0.23
TRIM59-207ENST00000496222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
TRIM59-207ENST00000496222 SSFA2P28290 1259 aa16.48■□□□□ 0.23
TRIM59-207ENST00000496222 FHDC1Q9C0D6 1143 aaPredicted RBP16.48■□□□□ 0.23
TRIM59-207ENST00000496222 UBR2Q8IWV8 1755 aa16.48■□□□□ 0.23
TRIM59-207ENST00000496222 CNTNAP4Q9C0A0 1308 aa16.47■□□□□ 0.23
TRIM59-207ENST00000496222 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
TRIM59-207ENST00000496222 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
TRIM59-207ENST00000496222 GNPATO15228 680 aa16.46■□□□□ 0.23
TRIM59-207ENST00000496222 PHF14O94880 888 aa16.45■□□□□ 0.22
TRIM59-207ENST00000496222 MSL1Q68DK7 614 aa16.45■□□□□ 0.22
TRIM59-207ENST00000496222 RPS6KA4O75676 772 aa16.44■□□□□ 0.22
TRIM59-207ENST00000496222 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
TRIM59-207ENST00000496222 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
TRIM59-207ENST00000496222 POLD1P28340 1107 aa16.43■□□□□ 0.22
TRIM59-207ENST00000496222 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
TRIM59-207ENST00000496222 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
TRIM59-207ENST00000496222 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
TRIM59-207ENST00000496222 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
TRIM59-207ENST00000496222 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
TRIM59-207ENST00000496222 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
TRIM59-207ENST00000496222 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
TRIM59-207ENST00000496222 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
TRIM59-207ENST00000496222 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
TRIM59-207ENST00000496222 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
TRIM59-207ENST00000496222 TEFQ10587 303 aa16.41■□□□□ 0.22
TRIM59-207ENST00000496222 TRAPPC3LQ5T215 181 aa16.41■□□□□ 0.22
TRIM59-207ENST00000496222 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
TRIM59-207ENST00000496222 MCM10Q7L590 875 aa16.41■□□□□ 0.22
TRIM59-207ENST00000496222 KCNQ3O43525 872 aa16.4■□□□□ 0.22
TRIM59-207ENST00000496222 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
TRIM59-207ENST00000496222 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
TRIM59-207ENST00000496222 NLGN2Q8NFZ4 835 aa16.38■□□□□ 0.21
TRIM59-207ENST00000496222 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
TRIM59-207ENST00000496222 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
TRIM59-207ENST00000496222 GYS1P13807 737 aa16.37■□□□□ 0.21
TRIM59-207ENST00000496222 NFE2L2Q16236 605 aa16.37■□□□□ 0.21
TRIM59-207ENST00000496222 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
TRIM59-207ENST00000496222 BTBD11A6QL63 1104 aa16.36■□□□□ 0.21
TRIM59-207ENST00000496222 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
TRIM59-207ENST00000496222 RTF1Q92541 710 aaKnown RBP16.36■□□□□ 0.21
TRIM59-207ENST00000496222 ZBTB1Q9Y2K1 713 aa16.36■□□□□ 0.21
TRIM59-207ENST00000496222 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
TRIM59-207ENST00000496222 RFC4P35249 363 aa16.35■□□□□ 0.21
TRIM59-207ENST00000496222 SRP68Q9UHB9 627 aaKnown RBP16.35■□□□□ 0.21
TRIM59-207ENST00000496222 USP42Q9H9J4 1324 aaKnown RBP16.35■□□□□ 0.21
TRIM59-207ENST00000496222 MMP10P09238 476 aa16.34■□□□□ 0.21
TRIM59-207ENST00000496222 NLGN1Q8N2Q7 840 aa16.34■□□□□ 0.21
TRIM59-207ENST00000496222 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
TRIM59-207ENST00000496222 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
TRIM59-207ENST00000496222 CD2APQ9Y5K6 639 aa16.34■□□□□ 0.21
TRIM59-207ENST00000496222 TAF7Q15545 349 aaPredicted RBP16.33■□□□□ 0.2
TRIM59-207ENST00000496222 THUMPD2Q9BTF0 503 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms