RNA–Protein interactions for RNA: ENST00000496183.5

RBM39-241, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-241ENST00000496183 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
RBM39-241ENST00000496183 SV2AQ7L0J3 742 aa9.65□□□□□ -0.86
RBM39-241ENST00000496183 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.86
RBM39-241ENST00000496183 UCN2Q96RP3 112 aa9.65□□□□□ -0.86
RBM39-241ENST00000496183 TIMMDC1Q9NPL8 285 aa9.65□□□□□ -0.86
RBM39-241ENST00000496183 NANOS1Q8WY41 292 aaKnown RBP9.64□□□□□ -0.87
RBM39-241ENST00000496183 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
RBM39-241ENST00000496183 SCNN1DP51172 638 aa9.63□□□□□ -0.87
RBM39-241ENST00000496183 RIPOR1Q6ZS17 1223 aa9.63□□□□□ -0.87
RBM39-241ENST00000496183 GAS2L1Q99501 681 aaPredicted RBP9.63□□□□□ -0.87
RBM39-241ENST00000496183 PCDHGA11Q9Y5H2 935 aa9.63□□□□□ -0.87
RBM39-241ENST00000496183 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
RBM39-241ENST00000496183 SENP3-EIF4A1A0A087X0R7 540 aa9.62□□□□□ -0.87
RBM39-241ENST00000496183 A0A1B0GTH6 734 aa9.62□□□□□ -0.87
RBM39-241ENST00000496183 SMTNP53814 917 aa9.62□□□□□ -0.87
RBM39-241ENST00000496183 PPARGC1BQ86YN6 1023 aaKnown RBP9.62□□□□□ -0.87
RBM39-241ENST00000496183 FHDC1Q9C0D6 1143 aaPredicted RBP9.62□□□□□ -0.87
RBM39-241ENST00000496183 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
RBM39-241ENST00000496183 TFIP11Q9UBB9 837 aaKnown RBP9.62□□□□□ -0.87
RBM39-241ENST00000496183 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
RBM39-241ENST00000496183 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
RBM39-241ENST00000496183 CSB-PGBD3P0DP91 1061 aa9.61□□□□□ -0.87
RBM39-241ENST00000496183 GMPRP36959 345 aa9.61□□□□□ -0.87
RBM39-241ENST00000496183 PGBD3Q8N328 593 aa9.61□□□□□ -0.87
RBM39-241ENST00000496183 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
RBM39-241ENST00000496183 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
RBM39-241ENST00000496183 PPP1R12CQ9BZL4 782 aa9.61□□□□□ -0.87
RBM39-241ENST00000496183 SERTAD1Q9UHV2 236 aa9.61□□□□□ -0.87
RBM39-241ENST00000496183 ZNF777Q9ULD5 760 aaPredicted RBP9.61□□□□□ -0.87
RBM39-241ENST00000496183 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
RBM39-241ENST00000496183 ERBB4Q15303 1308 aa9.6□□□□□ -0.87
RBM39-241ENST00000496183 F11P03951 625 aa9.6□□□□□ -0.87
RBM39-241ENST00000496183 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
RBM39-241ENST00000496183 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
RBM39-241ENST00000496183 SLC4A9Q96Q91 983 aa9.6□□□□□ -0.87
RBM39-241ENST00000496183 A6NJY4 79 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 TMEM229AB2RXF0 380 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 VWA5B2Q8N398 1253 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 TPCN2Q8NHX9 752 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 CHMP3Q9Y3E7 222 aa9.59□□□□□ -0.87
RBM39-241ENST00000496183 FAM181BA6NEQ2 426 aa9.58□□□□□ -0.88
RBM39-241ENST00000496183 PHKA2P46019 1235 aa9.58□□□□□ -0.88
RBM39-241ENST00000496183 LBRQ14739 615 aaKnown RBP9.58□□□□□ -0.88
RBM39-241ENST00000496183 C4orf17Q53FE4 359 aa9.58□□□□□ -0.88
RBM39-241ENST00000496183 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
RBM39-241ENST00000496183 CDK2AP1O14519 115 aa9.57□□□□□ -0.88
RBM39-241ENST00000496183 STAU1O95793 577 aaKnown RBP9.57□□□□□ -0.88
RBM39-241ENST00000496183 RASA1P20936 1047 aa9.57□□□□□ -0.88
RBM39-241ENST00000496183 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
RBM39-241ENST00000496183 MTFR1Q15390 333 aa9.57□□□□□ -0.88
RBM39-241ENST00000496183 C1orf216Q8TAB5 229 aa9.57□□□□□ -0.88
RBM39-241ENST00000496183 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
RBM39-241ENST00000496183 PLA2G4AP47712 749 aa9.56□□□□□ -0.88
RBM39-241ENST00000496183 EFHC2Q5JST6 749 aa9.56□□□□□ -0.88
RBM39-241ENST00000496183 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
RBM39-241ENST00000496183 NUCKS1Q9H1E3 243 aaKnown RBP9.56□□□□□ -0.88
RBM39-241ENST00000496183 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
RBM39-241ENST00000496183 CABP1Q9NZU7 370 aa9.56□□□□□ -0.88
RBM39-241ENST00000496183 M0R2N6 131 aa9.55□□□□□ -0.88
RBM39-241ENST00000496183 TATP17735 454 aaPredicted RBP9.55□□□□□ -0.88
RBM39-241ENST00000496183 CLDN10P78369 228 aa9.55□□□□□ -0.88
RBM39-241ENST00000496183 SIX5Q8N196 739 aa9.55□□□□□ -0.88
RBM39-241ENST00000496183 ZNF837Q96EG3 531 aaPredicted RBP9.55□□□□□ -0.88
RBM39-241ENST00000496183 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
RBM39-241ENST00000496183 AIDAQ96BJ3 306 aa9.54□□□□□ -0.88
RBM39-241ENST00000496183 CCDC97Q96F63 343 aaPredicted RBP9.54□□□□□ -0.88
RBM39-241ENST00000496183 COL25A1Q9BXS0 654 aaPredicted RBP9.54□□□□□ -0.88
RBM39-241ENST00000496183 GPAMQ9HCL2 828 aa9.54□□□□□ -0.88
RBM39-241ENST00000496183 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
RBM39-241ENST00000496183 C14orf37Q86TY3 774 aa9.53□□□□□ -0.88
RBM39-241ENST00000496183 SCHIP1Q9P0W5 487 aaPredicted RBP9.53□□□□□ -0.88
RBM39-241ENST00000496183 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
RBM39-241ENST00000496183 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
RBM39-241ENST00000496183 SEC13P55735 322 aa9.52□□□□□ -0.89
RBM39-241ENST00000496183 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
RBM39-241ENST00000496183 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
RBM39-241ENST00000496183 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
RBM39-241ENST00000496183 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
RBM39-241ENST00000496183 MSX1P28360 303 aa9.51□□□□□ -0.89
RBM39-241ENST00000496183 FIGNL1Q6PIW4 674 aa9.51□□□□□ -0.89
RBM39-241ENST00000496183 CNTNAP3BQ96NU0 1288 aa9.51□□□□□ -0.89
RBM39-241ENST00000496183 CNTNAP3Q9BZ76 1288 aa9.51□□□□□ -0.89
RBM39-241ENST00000496183 ZDHHC3Q9NYG2 299 aa9.51□□□□□ -0.89
RBM39-241ENST00000496183 DBN1Q16643 649 aa9.5□□□□□ -0.89
RBM39-241ENST00000496183 SLC9A9Q8IVB4 645 aa9.5□□□□□ -0.89
RBM39-241ENST00000496183 GTPBP3Q969Y2 492 aaKnown RBP9.5□□□□□ -0.89
RBM39-241ENST00000496183 CUEDC1Q9NWM3 386 aaPredicted RBP9.5□□□□□ -0.89
RBM39-241ENST00000496183 SERPINA10Q9UK55 444 aa9.5□□□□□ -0.89
RBM39-241ENST00000496183 ZNF232Q9UNY5 417 aa9.5□□□□□ -0.89
RBM39-241ENST00000496183 IQSEC3Q9UPP2 1182 aaPredicted RBP9.5□□□□□ -0.89
RBM39-241ENST00000496183 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
RBM39-241ENST00000496183 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
RBM39-241ENST00000496183 USP17L15C9J2P7 530 aa9.49□□□□□ -0.89
RBM39-241ENST00000496183 USP17L10C9JJH3 530 aa9.49□□□□□ -0.89
RBM39-241ENST00000496183 USP17L13C9JLJ4 530 aa9.49□□□□□ -0.89
RBM39-241ENST00000496183 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms