RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 IFNL2Q8IZJ0 200 aa20.86■□□□□ 0.93
HLA-A-208ENST00000496081 SCN11AQ9UI33 1791 aa20.86■□□□□ 0.93
HLA-A-208ENST00000496081 PARP4Q9UKK3 1724 aaKnown RBP20.85■□□□□ 0.93
HLA-A-208ENST00000496081 ABCC4O15439 1325 aa20.85■□□□□ 0.93
HLA-A-208ENST00000496081 API5Q9BZZ5 524 aaKnown RBP20.85■□□□□ 0.93
HLA-A-208ENST00000496081 COL14A1Q05707 1796 aaKnown RBP20.85■□□□□ 0.93
HLA-A-208ENST00000496081 KDM6AO15550 1401 aaPredicted RBP20.85■□□□□ 0.93
HLA-A-208ENST00000496081 CYP27B1O15528 508 aa20.85■□□□□ 0.93
HLA-A-208ENST00000496081 SLC4A2P04920 1241 aa20.85■□□□□ 0.93
HLA-A-208ENST00000496081 EIF4A1P60842 406 aaKnown RBP20.85■□□□□ 0.93
HLA-A-208ENST00000496081 PCDHB15Q9Y5E8 787 aa20.85■□□□□ 0.93
HLA-A-208ENST00000496081 KCNQ3O43525 872 aa20.84■□□□□ 0.93
HLA-A-208ENST00000496081 BTG4Q9NY30 223 aa20.84■□□□□ 0.93
HLA-A-208ENST00000496081 IGHDP01880 384 aa20.83■□□□□ 0.93
HLA-A-208ENST00000496081 CCDC30Q5VVM6 783 aa20.82■□□□□ 0.92
HLA-A-208ENST00000496081 ILDR1Q86SU0 546 aaPredicted RBP20.82■□□□□ 0.92
HLA-A-208ENST00000496081 PTPRCP08575 1304 aa20.81■□□□□ 0.92
HLA-A-208ENST00000496081 RGS12O14924 1447 aa20.81■□□□□ 0.92
HLA-A-208ENST00000496081 IL2RBP14784 551 aa20.81■□□□□ 0.92
HLA-A-208ENST00000496081 ZBTB40Q9NUA8 1239 aa20.81■□□□□ 0.92
HLA-A-208ENST00000496081 ZCRB1Q8TBF4 217 aaKnown RBP20.8■□□□□ 0.92
HLA-A-208ENST00000496081 DCAF5Q96JK2 942 aa20.8■□□□□ 0.92
HLA-A-208ENST00000496081 STK31Q9BXU1 1019 aa20.8■□□□□ 0.92
HLA-A-208ENST00000496081 SLC52A2Q9HAB3 445 aa20.8■□□□□ 0.92
HLA-A-208ENST00000496081 JCADQ9P266 1359 aa20.8■□□□□ 0.92
HLA-A-208ENST00000496081 G2E3Q7L622 706 aa20.8■□□□□ 0.92
HLA-A-208ENST00000496081 CACNA1FO60840 1977 aa20.79■□□□□ 0.92
HLA-A-208ENST00000496081 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
HLA-A-208ENST00000496081 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
HLA-A-208ENST00000496081 HSP90AB1P08238 724 aaKnown RBP20.79■□□□□ 0.92
HLA-A-208ENST00000496081 HOXB7P09629 217 aa20.79■□□□□ 0.92
HLA-A-208ENST00000496081 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
HLA-A-208ENST00000496081 NECTIN2Q92692 538 aa20.79■□□□□ 0.92
HLA-A-208ENST00000496081 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
HLA-A-208ENST00000496081 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
HLA-A-208ENST00000496081 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
HLA-A-208ENST00000496081 MRC1P22897 1456 aa20.78■□□□□ 0.92
HLA-A-208ENST00000496081 HEG1Q9ULI3 1381 aa20.77■□□□□ 0.92
HLA-A-208ENST00000496081 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
HLA-A-208ENST00000496081 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
HLA-A-208ENST00000496081 INTS3Q68E01 1043 aaKnown RBP20.76■□□□□ 0.91
HLA-A-208ENST00000496081 SKAP1Q86WV1 359 aa20.76■□□□□ 0.91
HLA-A-208ENST00000496081 SHANK3Q9BYB0 1731 aa20.76■□□□□ 0.91
HLA-A-208ENST00000496081 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
HLA-A-208ENST00000496081 CHMP4BQ9H444 224 aaKnown RBP20.75■□□□□ 0.91
HLA-A-208ENST00000496081 ADAMTS2O95450 1211 aa20.74■□□□□ 0.91
HLA-A-208ENST00000496081 RWDD1Q9H446 243 aaPredicted RBP20.74■□□□□ 0.91
HLA-A-208ENST00000496081 PLCH1Q4KWH8 1693 aa20.74■□□□□ 0.91
HLA-A-208ENST00000496081 GIGYF1O75420 1035 aaPredicted RBP20.74■□□□□ 0.91
HLA-A-208ENST00000496081 EIF2S2P20042 333 aaKnown RBP20.74■□□□□ 0.91
HLA-A-208ENST00000496081 FLIIQ13045 1269 aa20.74■□□□□ 0.91
HLA-A-208ENST00000496081 ZNF790Q6PG37 636 aa20.74■□□□□ 0.91
HLA-A-208ENST00000496081 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
HLA-A-208ENST00000496081 CHMP4AQ9BY43 222 aa20.73■□□□□ 0.91
HLA-A-208ENST00000496081 NKX1-1Q15270 411 aaPredicted RBP20.72■□□□□ 0.91
HLA-A-208ENST00000496081 CABP4P57796 275 aa20.71■□□□□ 0.91
HLA-A-208ENST00000496081 HDAC1Q13547 482 aaPredicted RBP20.71■□□□□ 0.91
HLA-A-208ENST00000496081 DDX54Q8TDD1 881 aaKnown RBP20.71■□□□□ 0.91
HLA-A-208ENST00000496081 F6X3S4 739 aa20.7■□□□□ 0.9
HLA-A-208ENST00000496081 FKBP5Q13451 457 aaPredicted RBP20.7■□□□□ 0.9
HLA-A-208ENST00000496081 CHPF2Q9P2E5 772 aa20.7■□□□□ 0.9
HLA-A-208ENST00000496081 DISP2A7MBM2 1401 aa20.7■□□□□ 0.9
HLA-A-208ENST00000496081 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
HLA-A-208ENST00000496081 PHAXQ9H814 394 aaKnown RBP20.69■□□□□ 0.9
HLA-A-208ENST00000496081 NRAPQ86VF7 1730 aa20.69■□□□□ 0.9
HLA-A-208ENST00000496081 SPATA31A6Q5VVP1 1343 aa20.69■□□□□ 0.9
HLA-A-208ENST00000496081 ERVV-2B6SEH9 535 aa20.68■□□□□ 0.9
HLA-A-208ENST00000496081 SLC4A10Q6U841 1118 aa20.67■□□□□ 0.9
HLA-A-208ENST00000496081 C1orf115Q9H7X2 142 aa20.67■□□□□ 0.9
HLA-A-208ENST00000496081 LRP6O75581 1613 aa20.67■□□□□ 0.9
HLA-A-208ENST00000496081 CCT4P50991 539 aaKnown RBP20.67■□□□□ 0.9
HLA-A-208ENST00000496081 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-208ENST00000496081 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
HLA-A-208ENST00000496081 TTC5Q8N0Z6 440 aa20.66■□□□□ 0.9
HLA-A-208ENST00000496081 C5P01031 1676 aa20.66■□□□□ 0.9
HLA-A-208ENST00000496081 WNK3Q9BYP7 1800 aa20.66■□□□□ 0.9
HLA-A-208ENST00000496081 ANXA1P04083 346 aa20.64■□□□□ 0.9
HLA-A-208ENST00000496081 RBM19Q9Y4C8 960 aaKnown RBP20.64■□□□□ 0.9
HLA-A-208ENST00000496081 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.9
HLA-A-208ENST00000496081 SLIT2O94813 1529 aa20.64■□□□□ 0.89
HLA-A-208ENST00000496081 MEX3CQ5U5Q3 659 aaKnown RBP20.64■□□□□ 0.89
HLA-A-208ENST00000496081 SPATA31A1Q5TZJ5 1347 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 TOGARAM1Q9Y4F4 1720 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 RGS3P49796 1198 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 MEIS3Q99687 375 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 PDZRN3Q9UPQ7 1066 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 N4BP2Q86UW6 1770 aaPredicted RBP20.63■□□□□ 0.89
HLA-A-208ENST00000496081 PXDNLA1KZ92 1463 aa20.63■□□□□ 0.89
HLA-A-208ENST00000496081 PROSER3Q2NL68 480 aa20.62■□□□□ 0.89
HLA-A-208ENST00000496081 SIRT2Q8IXJ6 389 aa20.62■□□□□ 0.89
HLA-A-208ENST00000496081 SMC5Q8IY18 1101 aa20.62■□□□□ 0.89
HLA-A-208ENST00000496081 C8orf37Q96NL8 207 aa20.62■□□□□ 0.89
HLA-A-208ENST00000496081 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
HLA-A-208ENST00000496081 GLI3P10071 1580 aa20.61■□□□□ 0.89
HLA-A-208ENST00000496081 PDIA6Q15084 440 aa20.61■□□□□ 0.89
HLA-A-208ENST00000496081 THRAP3Q9Y2W1 955 aaKnown RBP20.61■□□□□ 0.89
HLA-A-208ENST00000496081 PAPPAQ13219 1627 aa20.61■□□□□ 0.89
HLA-A-208ENST00000496081 UBR2Q8IWV8 1755 aa20.6■□□□□ 0.89
HLA-A-208ENST00000496081 EXOC5O00471 708 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms