RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
SHROOM1-206ENST00000495680 KDRP35968 1356 aa16.62■□□□□ 0.25
SHROOM1-206ENST00000495680 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
SHROOM1-206ENST00000495680 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
SHROOM1-206ENST00000495680 KDM6AO15550 1401 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-206ENST00000495680 HMGB2P26583 209 aaKnown RBP16.59■□□□□ 0.25
SHROOM1-206ENST00000495680 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
SHROOM1-206ENST00000495680 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHROOM1-206ENST00000495680 ADCY9O60503 1353 aa16.58■□□□□ 0.24
SHROOM1-206ENST00000495680 COL5A3P25940 1745 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-206ENST00000495680 MMP10P09238 476 aa16.57■□□□□ 0.24
SHROOM1-206ENST00000495680 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
SHROOM1-206ENST00000495680 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
SHROOM1-206ENST00000495680 RBM42Q9BTD8 480 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-206ENST00000495680 MYH14Q7Z406 1995 aaKnown RBP16.55■□□□□ 0.24
SHROOM1-206ENST00000495680 PLEKHG2Q9H7P9 1386 aa16.55■□□□□ 0.24
SHROOM1-206ENST00000495680 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
SHROOM1-206ENST00000495680 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
SHROOM1-206ENST00000495680 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
SHROOM1-206ENST00000495680 ZNF831Q5JPB2 1677 aa16.55■□□□□ 0.24
SHROOM1-206ENST00000495680 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
SHROOM1-206ENST00000495680 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
SHROOM1-206ENST00000495680 CICQ96RK0 1608 aaPredicted RBP16.54■□□□□ 0.24
SHROOM1-206ENST00000495680 KIF13BQ9NQT8 1826 aa16.54■□□□□ 0.24
SHROOM1-206ENST00000495680 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
SHROOM1-206ENST00000495680 TRAPPC3LQ5T215 181 aa16.53■□□□□ 0.24
SHROOM1-206ENST00000495680 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
SHROOM1-206ENST00000495680 RTCBQ9Y3I0 505 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-206ENST00000495680 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
SHROOM1-206ENST00000495680 HSP90AB1P08238 724 aaKnown RBP16.52■□□□□ 0.24
SHROOM1-206ENST00000495680 CABP4P57796 275 aa16.52■□□□□ 0.24
SHROOM1-206ENST00000495680 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
SHROOM1-206ENST00000495680 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
SHROOM1-206ENST00000495680 MTHFSP49914 203 aa16.51■□□□□ 0.23
SHROOM1-206ENST00000495680 SULT6B1Q6IMI4 303 aa16.51■□□□□ 0.23
SHROOM1-206ENST00000495680 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
SHROOM1-206ENST00000495680 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
SHROOM1-206ENST00000495680 A0A0G2JLW4 131 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 RPS6KA4O75676 772 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 GYS1P13807 737 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 IL13P35225 146 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 TJP1Q07157 1748 aa16.5■□□□□ 0.23
SHROOM1-206ENST00000495680 CEP350Q5VT06 3117 aa16.49■□□□□ 0.23
SHROOM1-206ENST00000495680 ADRA2BP18089 450 aa16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 NLGN1Q8N2Q7 840 aa16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 SCN11AQ9UI33 1791 aa16.48■□□□□ 0.23
SHROOM1-206ENST00000495680 DPEP1P16444 411 aa16.47■□□□□ 0.23
SHROOM1-206ENST00000495680 RFC4P35249 363 aa16.47■□□□□ 0.23
SHROOM1-206ENST00000495680 KNSTRNQ9Y448 316 aa16.47■□□□□ 0.23
SHROOM1-206ENST00000495680 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-206ENST00000495680 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
SHROOM1-206ENST00000495680 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
SHROOM1-206ENST00000495680 KIF3CO14782 793 aa16.45■□□□□ 0.22
SHROOM1-206ENST00000495680 TGFB2P61812 414 aa16.45■□□□□ 0.22
SHROOM1-206ENST00000495680 DDR1Q08345 913 aa16.45■□□□□ 0.22
SHROOM1-206ENST00000495680 FKBP8Q14318 412 aa16.45■□□□□ 0.22
SHROOM1-206ENST00000495680 ADAMTS7Q9UKP4 1686 aa16.45■□□□□ 0.22
SHROOM1-206ENST00000495680 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SHROOM1-206ENST00000495680 KCNA3P22001 575 aa16.44■□□□□ 0.22
SHROOM1-206ENST00000495680 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-206ENST00000495680 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
SHROOM1-206ENST00000495680 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
SHROOM1-206ENST00000495680 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-206ENST00000495680 HMOX1P09601 288 aa16.43■□□□□ 0.22
SHROOM1-206ENST00000495680 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
SHROOM1-206ENST00000495680 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
SHROOM1-206ENST00000495680 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-206ENST00000495680 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
SHROOM1-206ENST00000495680 ARHGAP27Q6ZUM4 889 aa16.42■□□□□ 0.22
SHROOM1-206ENST00000495680 FCHSD2O94868 740 aa16.41■□□□□ 0.22
SHROOM1-206ENST00000495680 HSPA6P17066 643 aa16.41■□□□□ 0.22
SHROOM1-206ENST00000495680 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
SHROOM1-206ENST00000495680 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
SHROOM1-206ENST00000495680 MRC1P22897 1456 aa16.41■□□□□ 0.22
SHROOM1-206ENST00000495680 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
SHROOM1-206ENST00000495680 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
SHROOM1-206ENST00000495680 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-206ENST00000495680 CHRNA5P30532 468 aa16.39■□□□□ 0.21
SHROOM1-206ENST00000495680 MTHFSDQ2M296 383 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-206ENST00000495680 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-206ENST00000495680 ARFGEF1Q9Y6D6 1849 aa16.39■□□□□ 0.21
SHROOM1-206ENST00000495680 USPL1Q5W0Q7 1092 aa16.38■□□□□ 0.21
SHROOM1-206ENST00000495680 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-206ENST00000495680 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-206ENST00000495680 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
SHROOM1-206ENST00000495680 TM4SF1P30408 202 aa16.37■□□□□ 0.21
SHROOM1-206ENST00000495680 NMRK2Q9NPI5 230 aa16.37■□□□□ 0.21
SHROOM1-206ENST00000495680 PIM2Q9P1W9 311 aa16.36■□□□□ 0.21
SHROOM1-206ENST00000495680 ZBTB1Q9Y2K1 713 aa16.36■□□□□ 0.21
SHROOM1-206ENST00000495680 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-206ENST00000495680 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
SHROOM1-206ENST00000495680 C9orf131Q5VYM1 1079 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms