RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
NCKAP1-208ENST00000495619 CCDC155Q8N6L0 562 aa10.63□□□□□ -0.71
NCKAP1-208ENST00000495619 IRF7Q92985 503 aa10.63□□□□□ -0.71
NCKAP1-208ENST00000495619 SMTNP53814 917 aa10.62□□□□□ -0.71
NCKAP1-208ENST00000495619 POU4F2Q12837 409 aa10.62□□□□□ -0.71
NCKAP1-208ENST00000495619 CCDC102BQ68D86 513 aa10.62□□□□□ -0.71
NCKAP1-208ENST00000495619 NBPF10Q6P3W6 841 aaKnown RBP10.62□□□□□ -0.71
NCKAP1-208ENST00000495619 NBPF15Q8N660 670 aa10.62□□□□□ -0.71
NCKAP1-208ENST00000495619 SERTAD1Q9UHV2 236 aa10.62□□□□□ -0.71
NCKAP1-208ENST00000495619 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 H3BM21 787 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 PPFIA3O75145 1194 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 RHOQP17081 205 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 TPCN2Q8NHX9 752 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 TIMMDC1Q9NPL8 285 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 HRH3Q9Y5N1 445 aa10.61□□□□□ -0.71
NCKAP1-208ENST00000495619 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
NCKAP1-208ENST00000495619 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
NCKAP1-208ENST00000495619 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
NCKAP1-208ENST00000495619 A6NJY4 79 aa10.59□□□□□ -0.71
NCKAP1-208ENST00000495619 TMEM229AB2RXF0 380 aa10.59□□□□□ -0.71
NCKAP1-208ENST00000495619 STAU1O95793 577 aaKnown RBP10.59□□□□□ -0.71
NCKAP1-208ENST00000495619 NIFKQ9BYG3 293 aaKnown RBP10.59□□□□□ -0.71
NCKAP1-208ENST00000495619 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
NCKAP1-208ENST00000495619 DYRK1BQ9Y463 629 aa10.59□□□□□ -0.71
NCKAP1-208ENST00000495619 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 RFX1P22670 979 aa10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 VEGFBP49765 207 aa10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 CLDN10P78369 228 aa10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 ZNF594Q96JF6 807 aaPredicted RBP10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 ZNF358Q9NW07 568 aa10.58□□□□□ -0.72
NCKAP1-208ENST00000495619 ZBTB7BO15156 539 aaPredicted RBP10.57□□□□□ -0.72
NCKAP1-208ENST00000495619 ITGA6P23229 1130 aa10.57□□□□□ -0.72
NCKAP1-208ENST00000495619 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
NCKAP1-208ENST00000495619 SIX5Q8N196 739 aa10.57□□□□□ -0.72
NCKAP1-208ENST00000495619 GMCL1Q96IK5 515 aa10.57□□□□□ -0.72
NCKAP1-208ENST00000495619 A0A1B0GTH6 734 aa10.56□□□□□ -0.72
NCKAP1-208ENST00000495619 H7C1W4 665 aa10.56□□□□□ -0.72
NCKAP1-208ENST00000495619 SEC13P55735 322 aa10.56□□□□□ -0.72
NCKAP1-208ENST00000495619 GAS2L1Q99501 681 aaPredicted RBP10.56□□□□□ -0.72
NCKAP1-208ENST00000495619 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 FAM196BA6NMK8 535 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 M0R2N6 131 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 MTFR1Q15390 333 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 FOXR1Q6PIV2 292 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 RIPOR1Q6ZS17 1223 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
NCKAP1-208ENST00000495619 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 F11P03951 625 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 PHKA2P46019 1235 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 C4orf17Q53FE4 359 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 SV2AQ7L0J3 742 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
NCKAP1-208ENST00000495619 CDC14CA4D256 554 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L15C9J2P7 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L13C9JLJ4 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L12C9JPN9 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L11C9JVI0 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L21D6R901 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L18D6R9N7 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L22D6RA61 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L17D6RBQ6 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L19D6RCP7 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L20D6RJB6 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 USP17L24Q0WX57 530 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 CABP1Q9NZU7 370 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 SCHIP1Q9P0W5 487 aaPredicted RBP10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
NCKAP1-208ENST00000495619 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
NCKAP1-208ENST00000495619 C1orf216Q8TAB5 229 aa10.52□□□□□ -0.73
NCKAP1-208ENST00000495619 NANOS1Q8WY41 292 aaKnown RBP10.52□□□□□ -0.73
NCKAP1-208ENST00000495619 AIDAQ96BJ3 306 aa10.52□□□□□ -0.73
NCKAP1-208ENST00000495619 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
NCKAP1-208ENST00000495619 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
NCKAP1-208ENST00000495619 PTK7Q13308 1070 aa10.51□□□□□ -0.73
NCKAP1-208ENST00000495619 ANKMY2Q8IV38 441 aa10.51□□□□□ -0.73
NCKAP1-208ENST00000495619 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
NCKAP1-208ENST00000495619 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
NCKAP1-208ENST00000495619 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 DPYDQ12882 1025 aa10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 CRTC2Q53ET0 693 aaPredicted RBP10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 VWA5B2Q8N398 1253 aa10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
NCKAP1-208ENST00000495619 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
NCKAP1-208ENST00000495619 LBRQ14739 615 aaKnown RBP10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 EFHC2Q5JST6 749 aa10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 SLC9A9Q8IVB4 645 aa10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 GAS2L2Q8NHY3 880 aa10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 ZNF232Q9UNY5 417 aa10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 IQSEC3Q9UPP2 1182 aaPredicted RBP10.48□□□□□ -0.73
NCKAP1-208ENST00000495619 MSX1P28360 303 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms