RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 SLC15A2Q16348 729 aa19.17■□□□□ 0.66
PTPRE-211ENST00000495530 C1orf141Q5JVX7 400 aa19.17■□□□□ 0.66
PTPRE-211ENST00000495530 RTF1Q92541 710 aaKnown RBP19.17■□□□□ 0.66
PTPRE-211ENST00000495530 GNAT3A8MTJ3 354 aa19.16■□□□□ 0.66
PTPRE-211ENST00000495530 EXOC5O00471 708 aa19.16■□□□□ 0.66
PTPRE-211ENST00000495530 AKAP4Q5JQC9 854 aa19.16■□□□□ 0.66
PTPRE-211ENST00000495530 ZNF530Q6P9A1 599 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-211ENST00000495530 PROM2Q8N271 834 aa19.16■□□□□ 0.66
PTPRE-211ENST00000495530 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
PTPRE-211ENST00000495530 WWC1Q8IX03 1113 aa19.15■□□□□ 0.66
PTPRE-211ENST00000495530 IFNL2Q8IZJ0 200 aa19.15■□□□□ 0.66
PTPRE-211ENST00000495530 LRRC37A3O60309 1634 aa19.14■□□□□ 0.66
PTPRE-211ENST00000495530 WDR63Q8IWG1 891 aa19.14■□□□□ 0.65
PTPRE-211ENST00000495530 MEGF6O75095 1541 aa19.14■□□□□ 0.65
PTPRE-211ENST00000495530 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
PTPRE-211ENST00000495530 TRIM35Q9UPQ4 493 aa19.13■□□□□ 0.65
PTPRE-211ENST00000495530 PCDH11XQ9BZA7 1347 aa19.13■□□□□ 0.65
PTPRE-211ENST00000495530 PCDH11YQ9BZA8 1340 aa19.13■□□□□ 0.65
PTPRE-211ENST00000495530 DDB1Q16531 1140 aa19.12■□□□□ 0.65
PTPRE-211ENST00000495530 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
PTPRE-211ENST00000495530 PHKG2P15735 406 aa19.1■□□□□ 0.65
PTPRE-211ENST00000495530 TXNRD1Q16881 649 aa19.1■□□□□ 0.65
PTPRE-211ENST00000495530 ZNF521Q96K83 1311 aa19.09■□□□□ 0.65
PTPRE-211ENST00000495530 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
PTPRE-211ENST00000495530 DDX54Q8TDD1 881 aaKnown RBP19.09■□□□□ 0.65
PTPRE-211ENST00000495530 BCL9O00512 1426 aa19.08■□□□□ 0.65
PTPRE-211ENST00000495530 IL16Q14005 1332 aa19.08■□□□□ 0.65
PTPRE-211ENST00000495530 CYP27B1O15528 508 aa19.08■□□□□ 0.64
PTPRE-211ENST00000495530 PTF1AQ7RTS3 328 aa19.08■□□□□ 0.64
PTPRE-211ENST00000495530 DCAF5Q96JK2 942 aa19.08■□□□□ 0.64
PTPRE-211ENST00000495530 WNK3Q9BYP7 1800 aa19.08■□□□□ 0.64
PTPRE-211ENST00000495530 NKX1-1Q15270 411 aaPredicted RBP19.07■□□□□ 0.64
PTPRE-211ENST00000495530 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
PTPRE-211ENST00000495530 E9PSI1 815 aa19.06■□□□□ 0.64
PTPRE-211ENST00000495530 MPRIPQ6WCQ1 1025 aa19.06■□□□□ 0.64
PTPRE-211ENST00000495530 MCM10Q7L590 875 aa19.06■□□□□ 0.64
PTPRE-211ENST00000495530 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
PTPRE-211ENST00000495530 RNMTO43148 476 aaKnown RBP19.05■□□□□ 0.64
PTPRE-211ENST00000495530 GRIN3BO60391 1043 aa19.05■□□□□ 0.64
PTPRE-211ENST00000495530 IL17REQ8NFR9 667 aa19.05■□□□□ 0.64
PTPRE-211ENST00000495530 COL24A1Q17RW2 1714 aa19.05■□□□□ 0.64
PTPRE-211ENST00000495530 GNAI1P63096 354 aa19.04■□□□□ 0.64
PTPRE-211ENST00000495530 TEFQ10587 303 aa19.04■□□□□ 0.64
PTPRE-211ENST00000495530 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
PTPRE-211ENST00000495530 PKD1L3Q7Z443 1732 aa19.04■□□□□ 0.64
PTPRE-211ENST00000495530 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
PTPRE-211ENST00000495530 TNS2Q63HR2 1409 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 CENPBP07199 599 aaPredicted RBP19.03■□□□□ 0.64
PTPRE-211ENST00000495530 KLHL34Q8N239 644 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 CFAP44Q96MT7 982 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 IFT57Q9NWB7 429 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 BABAM1Q9NWV8 329 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
PTPRE-211ENST00000495530 ERVV-2B6SEH9 535 aa19.02■□□□□ 0.64
PTPRE-211ENST00000495530 SLFN5Q08AF3 891 aa19.02■□□□□ 0.64
PTPRE-211ENST00000495530 TAF7Q15545 349 aaPredicted RBP19.02■□□□□ 0.64
PTPRE-211ENST00000495530 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
PTPRE-211ENST00000495530 QSER1Q2KHR3 1735 aa19.02■□□□□ 0.63
PTPRE-211ENST00000495530 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.63
PTPRE-211ENST00000495530 THUMPD2Q9BTF0 503 aaKnown RBP19.01■□□□□ 0.63
PTPRE-211ENST00000495530 POLD1P28340 1107 aa19■□□□□ 0.63
PTPRE-211ENST00000495530 CABP4P57796 275 aa19■□□□□ 0.63
PTPRE-211ENST00000495530 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
PTPRE-211ENST00000495530 CDCA7LQ96GN5 454 aa19■□□□□ 0.63
PTPRE-211ENST00000495530 LAS1LQ9Y4W2 734 aaKnown RBP19■□□□□ 0.63
PTPRE-211ENST00000495530 ZNF853P0CG23 659 aa18.99■□□□□ 0.63
PTPRE-211ENST00000495530 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
PTPRE-211ENST00000495530 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
PTPRE-211ENST00000495530 SLC52A2Q9HAB3 445 aa18.99■□□□□ 0.63
PTPRE-211ENST00000495530 CHL1O00533 1208 aa18.98■□□□□ 0.63
PTPRE-211ENST00000495530 SLC16A10Q8TF71 515 aa18.98■□□□□ 0.63
PTPRE-211ENST00000495530 APLP1P51693 650 aa18.97■□□□□ 0.63
PTPRE-211ENST00000495530 NFATC2IPQ8NCF5 419 aa18.97■□□□□ 0.63
PTPRE-211ENST00000495530 NHSQ6T4R5 1651 aa18.97■□□□□ 0.63
PTPRE-211ENST00000495530 BTBD11A6QL63 1104 aa18.96■□□□□ 0.63
PTPRE-211ENST00000495530 CAPN15O75808 1086 aa18.96■□□□□ 0.63
PTPRE-211ENST00000495530 YBX3P16989 372 aaKnown RBP eCLIP18.96■□□□□ 0.63
PTPRE-211ENST00000495530 SPINK5Q9NQ38 1064 aaPredicted RBP18.96■□□□□ 0.63
PTPRE-211ENST00000495530 TSPYL4Q9UJ04 414 aa18.96■□□□□ 0.63
PTPRE-211ENST00000495530 KDM6AO15550 1401 aaPredicted RBP18.95■□□□□ 0.62
PTPRE-211ENST00000495530 DUSP27Q5VZP5 1158 aa18.95■□□□□ 0.62
PTPRE-211ENST00000495530 NLGN2Q8NFZ4 835 aa18.95■□□□□ 0.62
PTPRE-211ENST00000495530 MBIPQ9NS73 344 aa18.94■□□□□ 0.62
PTPRE-211ENST00000495530 TMOD3Q9NYL9 352 aa18.94■□□□□ 0.62
PTPRE-211ENST00000495530 ADCY9O60503 1353 aa18.93■□□□□ 0.62
PTPRE-211ENST00000495530 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
PTPRE-211ENST00000495530 PRELPP51888 382 aa18.93■□□□□ 0.62
PTPRE-211ENST00000495530 ADAMTS7Q9UKP4 1686 aa18.92■□□□□ 0.62
PTPRE-211ENST00000495530 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
PTPRE-211ENST00000495530 FANCIQ9NVI1 1328 aa18.92■□□□□ 0.62
PTPRE-211ENST00000495530 SCN11AQ9UI33 1791 aa18.91■□□□□ 0.62
PTPRE-211ENST00000495530 BTAF1O14981 1849 aa18.91■□□□□ 0.62
PTPRE-211ENST00000495530 CT47B1P0C2W7 299 aaPredicted RBP18.91■□□□□ 0.62
PTPRE-211ENST00000495530 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
PTPRE-211ENST00000495530 COL13A1Q5TAT6 717 aaPredicted RBP18.91■□□□□ 0.62
PTPRE-211ENST00000495530 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
PTPRE-211ENST00000495530 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
PTPRE-211ENST00000495530 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
PTPRE-211ENST00000495530 DNAJC5GQ8N7S2 189 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms