RNA–Protein interactions for RNA: ENST00000495354.1

ARF4-208, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 495 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-208ENST00000495354 ADRA2BP18089 450 aa16.71■□□□□ 0.27
ARF4-208ENST00000495354 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
ARF4-208ENST00000495354 RTCBQ9Y3I0 505 aaKnown RBP16.71■□□□□ 0.27
ARF4-208ENST00000495354 CICQ96RK0 1608 aaPredicted RBP16.7■□□□□ 0.26
ARF4-208ENST00000495354 ITPK1Q13572 414 aa16.7■□□□□ 0.26
ARF4-208ENST00000495354 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
ARF4-208ENST00000495354 PLEKHO1Q53GL0 409 aaPredicted RBP16.7■□□□□ 0.26
ARF4-208ENST00000495354 DCAF5Q96JK2 942 aa16.7■□□□□ 0.26
ARF4-208ENST00000495354 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
ARF4-208ENST00000495354 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
ARF4-208ENST00000495354 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
ARF4-208ENST00000495354 GOLGB1Q14789 3259 aaKnown RBP16.69■□□□□ 0.26
ARF4-208ENST00000495354 CNTNAP4Q9C0A0 1308 aa16.69■□□□□ 0.26
ARF4-208ENST00000495354 MMP10P09238 476 aa16.68■□□□□ 0.26
ARF4-208ENST00000495354 TNNT2P45379 298 aaPredicted RBP16.68■□□□□ 0.26
ARF4-208ENST00000495354 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
ARF4-208ENST00000495354 TGFB2P61812 414 aa16.67■□□□□ 0.26
ARF4-208ENST00000495354 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
ARF4-208ENST00000495354 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
ARF4-208ENST00000495354 CCDC87Q9NVE4 849 aa16.67■□□□□ 0.26
ARF4-208ENST00000495354 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
ARF4-208ENST00000495354 CABP4P57796 275 aa16.66■□□□□ 0.26
ARF4-208ENST00000495354 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
ARF4-208ENST00000495354 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
ARF4-208ENST00000495354 C10orf71Q711Q0 1435 aa16.66■□□□□ 0.26
ARF4-208ENST00000495354 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
ARF4-208ENST00000495354 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
ARF4-208ENST00000495354 RFC4P35249 363 aa16.65■□□□□ 0.26
ARF4-208ENST00000495354 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
ARF4-208ENST00000495354 ZNF526Q8TF50 670 aaPredicted RBP16.65■□□□□ 0.26
ARF4-208ENST00000495354 HSPA6P17066 643 aa16.64■□□□□ 0.25
ARF4-208ENST00000495354 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
ARF4-208ENST00000495354 C4AP0C0L4 1744 aa16.63■□□□□ 0.25
ARF4-208ENST00000495354 RPS6KA4O75676 772 aa16.63■□□□□ 0.25
ARF4-208ENST00000495354 PANK3Q9H999 370 aa16.63■□□□□ 0.25
ARF4-208ENST00000495354 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
ARF4-208ENST00000495354 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
ARF4-208ENST00000495354 MTHFSP49914 203 aa16.62■□□□□ 0.25
ARF4-208ENST00000495354 MORC1Q86VD1 984 aa16.62■□□□□ 0.25
ARF4-208ENST00000495354 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
ARF4-208ENST00000495354 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
ARF4-208ENST00000495354 KIAA1551Q9HCM1 1747 aa16.6■□□□□ 0.25
ARF4-208ENST00000495354 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
ARF4-208ENST00000495354 GYS1P13807 737 aa16.6■□□□□ 0.25
ARF4-208ENST00000495354 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
ARF4-208ENST00000495354 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
ARF4-208ENST00000495354 KNSTRNQ9Y448 316 aa16.6■□□□□ 0.25
ARF4-208ENST00000495354 N4BP2Q86UW6 1770 aaPredicted RBP16.59■□□□□ 0.25
ARF4-208ENST00000495354 KIF3CO14782 793 aa16.57■□□□□ 0.24
ARF4-208ENST00000495354 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
ARF4-208ENST00000495354 FCHSD2O94868 740 aa16.57■□□□□ 0.24
ARF4-208ENST00000495354 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
ARF4-208ENST00000495354 SULT6B1Q6IMI4 303 aa16.57■□□□□ 0.24
ARF4-208ENST00000495354 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
ARF4-208ENST00000495354 A0A0G2JLW4 131 aa16.56■□□□□ 0.24
ARF4-208ENST00000495354 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
ARF4-208ENST00000495354 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
ARF4-208ENST00000495354 ARHGAP27Q6ZUM4 889 aa16.56■□□□□ 0.24
ARF4-208ENST00000495354 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
ARF4-208ENST00000495354 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
ARF4-208ENST00000495354 DPEP1P16444 411 aa16.55■□□□□ 0.24
ARF4-208ENST00000495354 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
ARF4-208ENST00000495354 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
ARF4-208ENST00000495354 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
ARF4-208ENST00000495354 TJP1Q07157 1748 aa16.55■□□□□ 0.24
ARF4-208ENST00000495354 MYH14Q7Z406 1995 aaKnown RBP16.55■□□□□ 0.24
ARF4-208ENST00000495354 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
ARF4-208ENST00000495354 TOMM70O94826 608 aa16.54■□□□□ 0.24
ARF4-208ENST00000495354 APLP1P51693 650 aa16.54■□□□□ 0.24
ARF4-208ENST00000495354 IL13P35225 146 aa16.53■□□□□ 0.24
ARF4-208ENST00000495354 MRC1P22897 1456 aa16.53■□□□□ 0.24
ARF4-208ENST00000495354 ZPR1O75312 459 aa16.52■□□□□ 0.24
ARF4-208ENST00000495354 DALRD3Q5D0E6 543 aaKnown RBP16.52■□□□□ 0.24
ARF4-208ENST00000495354 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
ARF4-208ENST00000495354 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
ARF4-208ENST00000495354 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
ARF4-208ENST00000495354 FKBP8Q14318 412 aa16.5■□□□□ 0.23
ARF4-208ENST00000495354 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
ARF4-208ENST00000495354 C9orf131Q5VYM1 1079 aa16.49■□□□□ 0.23
ARF4-208ENST00000495354 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
ARF4-208ENST00000495354 POLRMTO00411 1230 aaKnown RBP16.48■□□□□ 0.23
ARF4-208ENST00000495354 KCNA3P22001 575 aa16.48■□□□□ 0.23
ARF4-208ENST00000495354 DDR1Q08345 913 aa16.48■□□□□ 0.23
ARF4-208ENST00000495354 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
ARF4-208ENST00000495354 VSIG10Q8N0Z9 540 aa16.48■□□□□ 0.23
ARF4-208ENST00000495354 RBM46Q8TBY0 533 aaKnown RBP16.48■□□□□ 0.23
ARF4-208ENST00000495354 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
ARF4-208ENST00000495354 COL15A1P39059 1388 aa16.48■□□□□ 0.23
ARF4-208ENST00000495354 ZC3H4Q9UPT8 1303 aaKnown RBP16.47■□□□□ 0.23
ARF4-208ENST00000495354 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
ARF4-208ENST00000495354 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
ARF4-208ENST00000495354 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
ARF4-208ENST00000495354 DNAJC10Q8IXB1 793 aa16.47■□□□□ 0.23
ARF4-208ENST00000495354 USPL1Q5W0Q7 1092 aa16.46■□□□□ 0.23
ARF4-208ENST00000495354 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
ARF4-208ENST00000495354 RNF181Q9P0P0 153 aa16.46■□□□□ 0.23
ARF4-208ENST00000495354 NARFQ9UHQ1 456 aa16.46■□□□□ 0.23
ARF4-208ENST00000495354 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
ARF4-208ENST00000495354 KCPQ6ZWJ8 1503 aa16.45■□□□□ 0.22
ARF4-208ENST00000495354 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms