RNA–Protein interactions for RNA: ENST00000495188.2

RNF146-208, Transcript of ring finger protein 146, human

TSL 2

Gene RNF146, Length 593 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF146-208	ENST00000495188	USP17L17	D6RBQ6	530 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	USP17L19	D6RCP7	530 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	USP17L20	D6RJB6	530 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	USP17L24	Q0WX57	530 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	SLC27A3	Q5K4L6	730 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	SIX5	Q8N196	739 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	DNMT3L	Q9UJW3	386 aa		11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	RBM19	Q9Y4C8	960 aa	Known RBP	11.37	□□□□□ -0.59
RNF146-208	ENST00000495188	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.36	□□□□□ -0.59
RNF146-208	ENST00000495188	CENPC	Q03188	943 aa		11.36	□□□□□ -0.59
RNF146-208	ENST00000495188	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.36	□□□□□ -0.59
RNF146-208	ENST00000495188	CDCA8	Q53HL2	280 aa		11.36	□□□□□ -0.59
RNF146-208	ENST00000495188	PBXIP1	Q96AQ6	731 aa		11.36	□□□□□ -0.59
RNF146-208	ENST00000495188	HRH3	Q9Y5N1	445 aa		11.36	□□□□□ -0.59
RNF146-208	ENST00000495188	BACH1	O14867	736 aa		11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	PTK7	Q13308	1070 aa		11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	TLR1	Q15399	786 aa		11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	CRTC2	Q53ET0	693 aa	Predicted RBP	11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	ZNF358	Q9NW07	568 aa		11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	SERTAD1	Q9UHV2	236 aa		11.35	□□□□□ -0.59
RNF146-208	ENST00000495188	SOBP	A7XYQ1	873 aa		11.34	□□□□□ -0.59
RNF146-208	ENST00000495188	LYSMD3	Q7Z3D4	306 aa		11.34	□□□□□ -0.59
RNF146-208	ENST00000495188	ARID3A	Q99856	593 aa		11.34	□□□□□ -0.59
RNF146-208	ENST00000495188	GRIP2	Q9C0E4	1043 aa		11.34	□□□□□ -0.59
RNF146-208	ENST00000495188	GTF2E1	P29083	439 aa	Predicted RBP	11.33	□□□□□ -0.6
RNF146-208	ENST00000495188	SRPK2	P78362	688 aa	Known RBP	11.33	□□□□□ -0.6
RNF146-208	ENST00000495188	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.33	□□□□□ -0.6
RNF146-208	ENST00000495188	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.33	□□□□□ -0.6
RNF146-208	ENST00000495188	DKK1	O94907	266 aa		11.32	□□□□□ -0.6
RNF146-208	ENST00000495188	SMTN	P53814	917 aa		11.32	□□□□□ -0.6
RNF146-208	ENST00000495188	ANKMY2	Q8IV38	441 aa		11.32	□□□□□ -0.6
RNF146-208	ENST00000495188	SLC4A9	Q96Q91	983 aa		11.32	□□□□□ -0.6
RNF146-208	ENST00000495188	SEC13	P55735	322 aa		11.31	□□□□□ -0.6
RNF146-208	ENST00000495188	DPYD	Q12882	1025 aa		11.31	□□□□□ -0.6
RNF146-208	ENST00000495188	PRICKLE2	Q7Z3G6	844 aa		11.31	□□□□□ -0.6
RNF146-208	ENST00000495188		M0R2N6	131 aa		11.3	□□□□□ -0.6
RNF146-208	ENST00000495188	TMEM214	Q6NUQ4	689 aa	Known RBP	11.3	□□□□□ -0.6
RNF146-208	ENST00000495188		A6NJY4	79 aa		11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	SFI1	A8K8P3	1242 aa		11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	SPATA31C2	B4DYI2	1134 aa		11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	PPP1R15A	O75807	674 aa	Predicted RBP	11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	ATG7	O95352	703 aa		11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	MTFR1	Q15390	333 aa		11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	NOVA2	Q9UNW9	492 aa	Known RBP	11.29	□□□□□ -0.6
RNF146-208	ENST00000495188	ELOA	Q14241	798 aa	Known RBP	11.28	□□□□□ -0.6
RNF146-208	ENST00000495188	GNAS	Q5JWF2	1037 aa		11.28	□□□□□ -0.6
RNF146-208	ENST00000495188	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.28	□□□□□ -0.6
RNF146-208	ENST00000495188	TAS1R3	Q7RTX0	852 aa		11.27	□□□□□ -0.61
RNF146-208	ENST00000495188	NBPF15	Q8N660	670 aa		11.27	□□□□□ -0.61
RNF146-208	ENST00000495188	FAM200A	Q8TCP9	573 aa		11.27	□□□□□ -0.61
RNF146-208	ENST00000495188	ARX	Q96QS3	562 aa		11.27	□□□□□ -0.61
RNF146-208	ENST00000495188	CDK2AP1	O14519	115 aa		11.26	□□□□□ -0.61
RNF146-208	ENST00000495188	RHOQ	P17081	205 aa		11.26	□□□□□ -0.61
RNF146-208	ENST00000495188	POU4F2	Q12837	409 aa		11.26	□□□□□ -0.61
RNF146-208	ENST00000495188	NBPF10	Q6P3W6	841 aa	Known RBP	11.26	□□□□□ -0.61
RNF146-208	ENST00000495188	RHBDD1	Q8TEB9	315 aa		11.26	□□□□□ -0.61
RNF146-208	ENST00000495188	EPHA4	P54764	986 aa		11.25	□□□□□ -0.61
RNF146-208	ENST00000495188	PTS	Q03393	145 aa		11.25	□□□□□ -0.61
RNF146-208	ENST00000495188	WDR44	Q5JSH3	913 aa		11.25	□□□□□ -0.61
RNF146-208	ENST00000495188	TNS4	Q8IZW8	715 aa		11.25	□□□□□ -0.61
RNF146-208	ENST00000495188	TSEN2	Q8NCE0	465 aa	Known RBP	11.25	□□□□□ -0.61
RNF146-208	ENST00000495188	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.25	□□□□□ -0.61
RNF146-208	ENST00000495188	ZMIZ1	Q9ULJ6	1067 aa		11.24	□□□□□ -0.61
RNF146-208	ENST00000495188	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.24	□□□□□ -0.61
RNF146-208	ENST00000495188	C4orf17	Q53FE4	359 aa		11.23	□□□□□ -0.61
RNF146-208	ENST00000495188	NIFK	Q9BYG3	293 aa	Known RBP	11.23	□□□□□ -0.61
RNF146-208	ENST00000495188	SLC35F4	A4IF30	521 aa		11.22	□□□□□ -0.61
RNF146-208	ENST00000495188	FOXK2	Q01167	660 aa		11.22	□□□□□ -0.61
RNF146-208	ENST00000495188	SLC9A9	Q8IVB4	645 aa		11.22	□□□□□ -0.61
RNF146-208	ENST00000495188	HINFP	Q9BQA5	517 aa		11.22	□□□□□ -0.61
RNF146-208	ENST00000495188	TIMMDC1	Q9NPL8	285 aa		11.22	□□□□□ -0.61
RNF146-208	ENST00000495188	ACIN1	Q9UKV3	1341 aa	Known RBP	11.22	□□□□□ -0.61
RNF146-208	ENST00000495188	PHKA2	P46019	1235 aa		11.21	□□□□□ -0.61
RNF146-208	ENST00000495188	STK32A	Q8WU08	396 aa		11.21	□□□□□ -0.61
RNF146-208	ENST00000495188	CABP1	Q9NZU7	370 aa		11.21	□□□□□ -0.61
RNF146-208	ENST00000495188	NXF1	Q9UBU9	619 aa	Known RBP	11.21	□□□□□ -0.61
RNF146-208	ENST00000495188	USP3	Q9Y6I4	520 aa		11.21	□□□□□ -0.61
RNF146-208	ENST00000495188	SENP3-EIF4A1	A0A087X0R7	540 aa		11.2	□□□□□ -0.62
RNF146-208	ENST00000495188	PLA2G4A	P47712	749 aa		11.2	□□□□□ -0.62
RNF146-208	ENST00000495188	CCDC155	Q8N6L0	562 aa		11.2	□□□□□ -0.62
RNF146-208	ENST00000495188	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.2	□□□□□ -0.62
RNF146-208	ENST00000495188	NPAS3	Q8IXF0	933 aa		11.19	□□□□□ -0.62
RNF146-208	ENST00000495188	DYRK1B	Q9Y463	629 aa		11.19	□□□□□ -0.62
RNF146-208	ENST00000495188	SWI5	Q1ZZU3	235 aa		11.18	□□□□□ -0.62
RNF146-208	ENST00000495188	TBCEL	Q5QJ74	424 aa		11.18	□□□□□ -0.62
RNF146-208	ENST00000495188	ZNF295-AS1	Q8N0V1	137 aa		11.18	□□□□□ -0.62
RNF146-208	ENST00000495188	CHMP3	Q9Y3E7	222 aa		11.18	□□□□□ -0.62
RNF146-208	ENST00000495188		A0A1B0GTH6	734 aa		11.17	□□□□□ -0.62
RNF146-208	ENST00000495188	PPFIA3	O75145	1194 aa		11.17	□□□□□ -0.62
RNF146-208	ENST00000495188	PSMA6	P60900	246 aa	Known RBP	11.17	□□□□□ -0.62
RNF146-208	ENST00000495188	TMEM164	Q5U3C3	297 aa		11.17	□□□□□ -0.62
RNF146-208	ENST00000495188	GAS2L2	Q8NHY3	880 aa		11.17	□□□□□ -0.62
RNF146-208	ENST00000495188	TERT	O14746	1132 aa	Known RBP	11.16	□□□□□ -0.62
RNF146-208	ENST00000495188	CSB-PGBD3	P0DP91	1061 aa		11.16	□□□□□ -0.62
RNF146-208	ENST00000495188	TEAD4	Q15561	434 aa		11.16	□□□□□ -0.62
RNF146-208	ENST00000495188	GAS2L1	Q99501	681 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF146-208	ENST00000495188	ATAD2	Q6PL18	1390 aa		11.16	□□□□□ -0.62
RNF146-208	ENST00000495188	PPP1R12B	O60237	982 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF146-208	ENST00000495188	LGR5	O75473	907 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms