RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-211ENST00000495176 POLD1P28340 1107 aa24.36■■□□□ 1.49
CYTH3-211ENST00000495176 MSL1Q68DK7 614 aa24.36■■□□□ 1.49
CYTH3-211ENST00000495176 NFATC2IPQ8NCF5 419 aa24.36■■□□□ 1.49
CYTH3-211ENST00000495176 CFAP53Q96M91 514 aa24.36■■□□□ 1.49
CYTH3-211ENST00000495176 SGIP1Q9BQI5 828 aa24.36■■□□□ 1.49
CYTH3-211ENST00000495176 KDM6AO15550 1401 aaPredicted RBP24.35■■□□□ 1.49
CYTH3-211ENST00000495176 LINC00116Q8NCU8 138 aa24.35■■□□□ 1.49
CYTH3-211ENST00000495176 ITPK1Q13572 414 aa24.34■■□□□ 1.49
CYTH3-211ENST00000495176 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
CYTH3-211ENST00000495176 AKAP4Q5JQC9 854 aa24.34■■□□□ 1.49
CYTH3-211ENST00000495176 FLAD1Q8NFF5 587 aa24.34■■□□□ 1.49
CYTH3-211ENST00000495176 VIRMAQ69YN4 1812 aaKnown RBP24.33■■□□□ 1.49
CYTH3-211ENST00000495176 C4BP0C0L5 1744 aa24.33■■□□□ 1.49
CYTH3-211ENST00000495176 PPP2R1AP30153 589 aa24.33■■□□□ 1.49
CYTH3-211ENST00000495176 SCN11AQ9UI33 1791 aa24.32■■□□□ 1.48
CYTH3-211ENST00000495176 PTCD1O75127 700 aaKnown RBP24.32■■□□□ 1.48
CYTH3-211ENST00000495176 SYT17Q9BSW7 474 aa24.32■■□□□ 1.48
CYTH3-211ENST00000495176 LGR6Q9HBX8 967 aa24.32■■□□□ 1.48
CYTH3-211ENST00000495176 AMIGO3Q86WK7 504 aa24.31■■□□□ 1.48
CYTH3-211ENST00000495176 GNPATO15228 680 aa24.3■■□□□ 1.48
CYTH3-211ENST00000495176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.29■■□□□ 1.48
CYTH3-211ENST00000495176 UBR3Q6ZT12 1888 aa24.29■■□□□ 1.48
CYTH3-211ENST00000495176 COL24A1Q17RW2 1714 aa24.28■■□□□ 1.48
CYTH3-211ENST00000495176 SLC4A9Q96Q91 983 aa24.28■■□□□ 1.48
CYTH3-211ENST00000495176 NUDCQ9Y266 331 aa24.28■■□□□ 1.48
CYTH3-211ENST00000495176 COL3A1P02461 1466 aaPredicted RBP24.27■■□□□ 1.48
CYTH3-211ENST00000495176 RNMTO43148 476 aaKnown RBP24.27■■□□□ 1.48
CYTH3-211ENST00000495176 U2AF1L5P0DN76 240 aaPredicted RBP24.26■■□□□ 1.47
CYTH3-211ENST00000495176 U2AF1Q01081 240 aaKnown RBP eCLIP24.26■■□□□ 1.47
CYTH3-211ENST00000495176 SLC52A2Q9HAB3 445 aa24.25■■□□□ 1.47
CYTH3-211ENST00000495176 PRKAR2BP31323 418 aa24.24■■□□□ 1.47
CYTH3-211ENST00000495176 DDX10Q13206 875 aaKnown RBP24.24■■□□□ 1.47
CYTH3-211ENST00000495176 ZNF831Q5JPB2 1677 aa24.24■■□□□ 1.47
CYTH3-211ENST00000495176 SSFA2P28290 1259 aa24.23■■□□□ 1.47
CYTH3-211ENST00000495176 SLC39A6Q13433 755 aa24.23■■□□□ 1.47
CYTH3-211ENST00000495176 GAS2L2Q8NHY3 880 aa24.22■■□□□ 1.47
CYTH3-211ENST00000495176 RTCBQ9Y3I0 505 aaKnown RBP24.22■■□□□ 1.47
CYTH3-211ENST00000495176 PELP1Q8IZL8 1130 aaKnown RBP24.21■■□□□ 1.47
CYTH3-211ENST00000495176 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
CYTH3-211ENST00000495176 TRAPPC3LQ5T215 181 aa24.2■■□□□ 1.46
CYTH3-211ENST00000495176 RSPH6AQ9H0K4 717 aa24.2■■□□□ 1.46
CYTH3-211ENST00000495176 GNAT3A8MTJ3 354 aa24.19■■□□□ 1.46
CYTH3-211ENST00000495176 COL5A3P25940 1745 aaPredicted RBP24.18■■□□□ 1.46
CYTH3-211ENST00000495176 MAP3K5Q99683 1374 aa24.18■■□□□ 1.46
CYTH3-211ENST00000495176 NLGN2Q8NFZ4 835 aa24.17■■□□□ 1.46
CYTH3-211ENST00000495176 MYH14Q7Z406 1995 aaKnown RBP24.16■■□□□ 1.46
CYTH3-211ENST00000495176 TEFQ10587 303 aa24.16■■□□□ 1.46
CYTH3-211ENST00000495176 GPR162Q16538 588 aa24.16■■□□□ 1.46
CYTH3-211ENST00000495176 RC3H1Q5TC82 1133 aaKnown RBP24.16■■□□□ 1.46
CYTH3-211ENST00000495176 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
CYTH3-211ENST00000495176 YY1P25490 414 aa24.15■■□□□ 1.46
CYTH3-211ENST00000495176 RFC4P35249 363 aa24.15■■□□□ 1.46
CYTH3-211ENST00000495176 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
CYTH3-211ENST00000495176 DNAJC10Q8IXB1 793 aa24.15■■□□□ 1.46
CYTH3-211ENST00000495176 ARHGEF1Q92888 912 aaKnown RBP24.15■■□□□ 1.46
CYTH3-211ENST00000495176 CNTNAP4Q9C0A0 1308 aa24.14■■□□□ 1.46
CYTH3-211ENST00000495176 RPS6KA4O75676 772 aa24.14■■□□□ 1.45
CYTH3-211ENST00000495176 TTC5Q8N0Z6 440 aa24.14■■□□□ 1.45
CYTH3-211ENST00000495176 FCHSD2O94868 740 aa24.13■■□□□ 1.45
CYTH3-211ENST00000495176 CHD4Q14839 1912 aa24.12■■□□□ 1.45
CYTH3-211ENST00000495176 ADAMTS7Q9UKP4 1686 aa24.12■■□□□ 1.45
CYTH3-211ENST00000495176 MRC1P22897 1456 aa24.12■■□□□ 1.45
CYTH3-211ENST00000495176 ADRA2BP18089 450 aa24.11■■□□□ 1.45
CYTH3-211ENST00000495176 RTF1Q92541 710 aaKnown RBP24.1■■□□□ 1.45
CYTH3-211ENST00000495176 TJP1Q07157 1748 aa24.1■■□□□ 1.45
CYTH3-211ENST00000495176 NEFMP07197 916 aa24.09■■□□□ 1.45
CYTH3-211ENST00000495176 MMP10P09238 476 aa24.09■■□□□ 1.45
CYTH3-211ENST00000495176 INTS5Q6P9B9 1019 aaKnown RBP24.09■■□□□ 1.45
CYTH3-211ENST00000495176 MCM10Q7L590 875 aa24.09■■□□□ 1.45
CYTH3-211ENST00000495176 RALBP1Q15311 655 aa24.08■■□□□ 1.45
CYTH3-211ENST00000495176 CCDC87Q9NVE4 849 aa24.08■■□□□ 1.45
CYTH3-211ENST00000495176 SRP68Q9UHB9 627 aaKnown RBP24.08■■□□□ 1.45
CYTH3-211ENST00000495176 WWC3Q9ULE0 1092 aa24.08■■□□□ 1.45
CYTH3-211ENST00000495176 DCTN1Q14203 1278 aa24.07■■□□□ 1.44
CYTH3-211ENST00000495176 NLGN1Q8N2Q7 840 aa24.07■■□□□ 1.44
CYTH3-211ENST00000495176 CD2APQ9Y5K6 639 aa24.07■■□□□ 1.44
CYTH3-211ENST00000495176 CICQ96RK0 1608 aaPredicted RBP24.06■■□□□ 1.44
CYTH3-211ENST00000495176 BTBD11A6QL63 1104 aa24.06■■□□□ 1.44
CYTH3-211ENST00000495176 CYP19A1P11511 503 aaPredicted RBP24.06■■□□□ 1.44
CYTH3-211ENST00000495176 ZNF790Q6PG37 636 aa24.06■■□□□ 1.44
CYTH3-211ENST00000495176 GYS1P13807 737 aa24.05■■□□□ 1.44
CYTH3-211ENST00000495176 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
CYTH3-211ENST00000495176 SIPA1L3O60292 1781 aaPredicted RBP24.05■■□□□ 1.44
CYTH3-211ENST00000495176 UBR2Q8IWV8 1755 aa24.04■■□□□ 1.44
CYTH3-211ENST00000495176 KCNQ3O43525 872 aa24.04■■□□□ 1.44
CYTH3-211ENST00000495176 CANXP27824 592 aaKnown RBP24.04■■□□□ 1.44
CYTH3-211ENST00000495176 VSIG10Q8N0Z9 540 aa24.03■■□□□ 1.44
CYTH3-211ENST00000495176 ZBTB1Q9Y2K1 713 aa24.03■■□□□ 1.44
CYTH3-211ENST00000495176 UTRNP46939 3433 aa24.03■■□□□ 1.44
CYTH3-211ENST00000495176 C4AP0C0L4 1744 aa24.03■■□□□ 1.44
CYTH3-211ENST00000495176 KCPQ6ZWJ8 1503 aa24.02■■□□□ 1.44
CYTH3-211ENST00000495176 ZPR1O75312 459 aa24.02■■□□□ 1.44
CYTH3-211ENST00000495176 STARD3NLO95772 234 aa24.02■■□□□ 1.44
CYTH3-211ENST00000495176 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
CYTH3-211ENST00000495176 FKBP8Q14318 412 aa24.01■■□□□ 1.43
CYTH3-211ENST00000495176 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
CYTH3-211ENST00000495176 PNNQ9H307 717 aaKnown RBP24.01■■□□□ 1.43
CYTH3-211ENST00000495176 ZNF330Q9Y3S2 320 aaPredicted RBP24.01■■□□□ 1.43
CYTH3-211ENST00000495176 PARP3Q9Y6F1 533 aa24.01■■□□□ 1.43
CYTH3-211ENST00000495176 CEMIPQ8WUJ3 1361 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms