RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
CBX4-204ENST00000495122 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
CBX4-204ENST00000495122 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
CBX4-204ENST00000495122 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
CBX4-204ENST00000495122 EMILIN1Q9Y6C2 1016 aa21.04■□□□□ 0.96
CBX4-204ENST00000495122 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
CBX4-204ENST00000495122 CHD4Q14839 1912 aa21.03■□□□□ 0.96
CBX4-204ENST00000495122 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
CBX4-204ENST00000495122 B4GALNT3Q6L9W6 998 aa21.01■□□□□ 0.95
CBX4-204ENST00000495122 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
CBX4-204ENST00000495122 LRRC4BQ9NT99 713 aa21.01■□□□□ 0.95
CBX4-204ENST00000495122 PPP1R1BQ9UD71 204 aaPredicted RBP21.01■□□□□ 0.95
CBX4-204ENST00000495122 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
CBX4-204ENST00000495122 ZBTB7AO95365 584 aa21■□□□□ 0.95
CBX4-204ENST00000495122 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
CBX4-204ENST00000495122 PPM1GO15355 546 aaPredicted RBP20.99■□□□□ 0.95
CBX4-204ENST00000495122 TATP17735 454 aaPredicted RBP20.99■□□□□ 0.95
CBX4-204ENST00000495122 PRIM1P49642 420 aaKnown RBP20.99■□□□□ 0.95
CBX4-204ENST00000495122 AAMPQ13685 434 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 PDE3AQ14432 1141 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 ZNF827Q17R98 1081 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 TSHZ2Q9NRE2 1034 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 PCDH11XQ9BZA7 1347 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 PCDH11YQ9BZA8 1340 aa20.99■□□□□ 0.95
CBX4-204ENST00000495122 PRKAR2BP31323 418 aa20.98■□□□□ 0.95
CBX4-204ENST00000495122 PTGER2P43116 358 aa20.98■□□□□ 0.95
CBX4-204ENST00000495122 NFE2L2Q16236 605 aa20.98■□□□□ 0.95
CBX4-204ENST00000495122 SLC27A3Q5K4L6 730 aa20.98■□□□□ 0.95
CBX4-204ENST00000495122 EXOC6Q8TAG9 804 aa20.98■□□□□ 0.95
CBX4-204ENST00000495122 SYTL4Q96C24 671 aaPredicted RBP20.98■□□□□ 0.95
CBX4-204ENST00000495122 TRIM35Q9UPQ4 493 aa20.98■□□□□ 0.95
CBX4-204ENST00000495122 RIPK4P57078 832 aa20.97■□□□□ 0.95
CBX4-204ENST00000495122 C4BP0C0L5 1744 aa20.96■□□□□ 0.95
CBX4-204ENST00000495122 AKT1S1Q96B36 256 aa20.95■□□□□ 0.94
CBX4-204ENST00000495122 ZNF428Q96B54 188 aa20.95■□□□□ 0.94
CBX4-204ENST00000495122 MTFR1LQ9H019 292 aa20.95■□□□□ 0.94
CBX4-204ENST00000495122 SGIP1Q9BQI5 828 aa20.94■□□□□ 0.94
CBX4-204ENST00000495122 ATF5Q9Y2D1 282 aaPredicted RBP20.94■□□□□ 0.94
CBX4-204ENST00000495122 MS4A1P11836 297 aa20.93■□□□□ 0.94
CBX4-204ENST00000495122 CRBNQ96SW2 442 aa20.93■□□□□ 0.94
CBX4-204ENST00000495122 CYP27B1O15528 508 aa20.92■□□□□ 0.94
CBX4-204ENST00000495122 RARSP54136 660 aaKnown RBP20.92■□□□□ 0.94
CBX4-204ENST00000495122 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
CBX4-204ENST00000495122 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
CBX4-204ENST00000495122 ZNF831Q5JPB2 1677 aa20.92■□□□□ 0.94
CBX4-204ENST00000495122 SCN11AQ9UI33 1791 aa20.92■□□□□ 0.94
CBX4-204ENST00000495122 PLIN1O60240 522 aa20.91■□□□□ 0.94
CBX4-204ENST00000495122 EYA1Q99502 592 aa20.91■□□□□ 0.94
CBX4-204ENST00000495122 COL5A3P25940 1745 aaPredicted RBP20.9■□□□□ 0.94
CBX4-204ENST00000495122 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
CBX4-204ENST00000495122 PNPLA7Q6ZV29 1317 aa20.9■□□□□ 0.94
CBX4-204ENST00000495122 KCNQ4P56696 695 aa20.9■□□□□ 0.94
CBX4-204ENST00000495122 KDRP35968 1356 aa20.88■□□□□ 0.93
CBX4-204ENST00000495122 GNAI1P63096 354 aa20.88■□□□□ 0.93
CBX4-204ENST00000495122 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
CBX4-204ENST00000495122 CCNL1Q9UK58 526 aaPredicted RBP20.88■□□□□ 0.93
CBX4-204ENST00000495122 PALLDQ8WX93 1383 aa20.87■□□□□ 0.93
CBX4-204ENST00000495122 HMOX1P09601 288 aa20.87■□□□□ 0.93
CBX4-204ENST00000495122 DLG5Q8TDM6 1919 aa20.86■□□□□ 0.93
CBX4-204ENST00000495122 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
CBX4-204ENST00000495122 BCAR3O75815 825 aa20.86■□□□□ 0.93
CBX4-204ENST00000495122 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
CBX4-204ENST00000495122 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
CBX4-204ENST00000495122 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
CBX4-204ENST00000495122 CANXP27824 592 aaKnown RBP20.85■□□□□ 0.93
CBX4-204ENST00000495122 ALDH1L2Q3SY69 923 aa20.85■□□□□ 0.93
CBX4-204ENST00000495122 SLC16A10Q8TF71 515 aa20.85■□□□□ 0.93
CBX4-204ENST00000495122 FHDC1Q9C0D6 1143 aaPredicted RBP20.85■□□□□ 0.93
CBX4-204ENST00000495122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.85■□□□□ 0.93
CBX4-204ENST00000495122 BRPF1P55201 1214 aaPredicted RBP20.84■□□□□ 0.93
CBX4-204ENST00000495122 C20orf194Q5TEA3 1177 aa20.84■□□□□ 0.93
CBX4-204ENST00000495122 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
CBX4-204ENST00000495122 TFCP2L1Q9NZI6 479 aa20.84■□□□□ 0.93
CBX4-204ENST00000495122 MPRIPQ6WCQ1 1025 aa20.83■□□□□ 0.93
CBX4-204ENST00000495122 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
CBX4-204ENST00000495122 ARXQ96QS3 562 aa20.83■□□□□ 0.93
CBX4-204ENST00000495122 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
CBX4-204ENST00000495122 SYT17Q9BSW7 474 aa20.82■□□□□ 0.92
CBX4-204ENST00000495122 CICQ96RK0 1608 aaPredicted RBP20.82■□□□□ 0.92
CBX4-204ENST00000495122 KIF16BQ96L93 1317 aa20.81■□□□□ 0.92
CBX4-204ENST00000495122 EXOSC9Q06265 439 aaKnown RBP20.81■□□□□ 0.92
CBX4-204ENST00000495122 SULT6B1Q6IMI4 303 aa20.81■□□□□ 0.92
CBX4-204ENST00000495122 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
CBX4-204ENST00000495122 MYH14Q7Z406 1995 aaKnown RBP20.8■□□□□ 0.92
CBX4-204ENST00000495122 DCAF8L1A6NGE4 600 aa20.8■□□□□ 0.92
CBX4-204ENST00000495122 PHKG2P15735 406 aa20.8■□□□□ 0.92
CBX4-204ENST00000495122 CFAP44Q96MT7 982 aa20.8■□□□□ 0.92
CBX4-204ENST00000495122 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
CBX4-204ENST00000495122 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
CBX4-204ENST00000495122 ZKSCAN2Q63HK3 967 aa20.79■□□□□ 0.92
CBX4-204ENST00000495122 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
CBX4-204ENST00000495122 PIGBQ92521 554 aa20.79■□□□□ 0.92
CBX4-204ENST00000495122 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
CBX4-204ENST00000495122 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
CBX4-204ENST00000495122 TJP1Q07157 1748 aa20.78■□□□□ 0.92
CBX4-204ENST00000495122 IPO8O15397 1037 aaKnown RBP20.78■□□□□ 0.92
CBX4-204ENST00000495122 TSR2Q969E8 191 aaKnown RBP20.78■□□□□ 0.92
CBX4-204ENST00000495122 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.92
CBX4-204ENST00000495122 GAS2L2Q8NHY3 880 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms