RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 EYA1Q99502 592 aa18.26■□□□□ 0.51
UBXN11-215ENST00000494942 DDX49Q9Y6V7 483 aaKnown RBP18.26■□□□□ 0.51
UBXN11-215ENST00000494942 F6X3S4 739 aa18.25■□□□□ 0.51
UBXN11-215ENST00000494942 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
UBXN11-215ENST00000494942 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
UBXN11-215ENST00000494942 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
UBXN11-215ENST00000494942 LRRC37A3O60309 1634 aa18.24■□□□□ 0.51
UBXN11-215ENST00000494942 SLC26A8Q96RN1 970 aa18.24■□□□□ 0.51
UBXN11-215ENST00000494942 TBX22Q9Y458 520 aa18.24■□□□□ 0.51
UBXN11-215ENST00000494942 SLIT1O75093 1534 aa18.23■□□□□ 0.51
UBXN11-215ENST00000494942 TRIM44Q96DX7 344 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-215ENST00000494942 LRRCC1Q9C099 1032 aa18.23■□□□□ 0.51
UBXN11-215ENST00000494942 BABAM1Q9NWV8 329 aa18.23■□□□□ 0.51
UBXN11-215ENST00000494942 FLIIQ13045 1269 aa18.22■□□□□ 0.51
UBXN11-215ENST00000494942 ARHGAP23Q9P227 1491 aa18.22■□□□□ 0.51
UBXN11-215ENST00000494942 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
UBXN11-215ENST00000494942 DIP2AQ14689 1571 aa18.22■□□□□ 0.51
UBXN11-215ENST00000494942 GNAT3A8MTJ3 354 aa18.22■□□□□ 0.51
UBXN11-215ENST00000494942 SALL3Q9BXA9 1300 aa18.22■□□□□ 0.51
UBXN11-215ENST00000494942 PIK3C2AO00443 1686 aa18.21■□□□□ 0.51
UBXN11-215ENST00000494942 FAM208AQ9UK61 1670 aaKnown RBP18.21■□□□□ 0.51
UBXN11-215ENST00000494942 MCM2P49736 904 aa18.21■□□□□ 0.51
UBXN11-215ENST00000494942 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
UBXN11-215ENST00000494942 ESPNB1AK53 854 aa18.21■□□□□ 0.51
UBXN11-215ENST00000494942 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
UBXN11-215ENST00000494942 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
UBXN11-215ENST00000494942 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
UBXN11-215ENST00000494942 AK9Q5TCS8 1911 aa18.2■□□□□ 0.5
UBXN11-215ENST00000494942 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
UBXN11-215ENST00000494942 CCDC173Q0VFZ6 552 aa18.2■□□□□ 0.5
UBXN11-215ENST00000494942 ANP32BQ92688 251 aaKnown RBP18.2■□□□□ 0.5
UBXN11-215ENST00000494942 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
UBXN11-215ENST00000494942 PXDNLA1KZ92 1463 aa18.19■□□□□ 0.5
UBXN11-215ENST00000494942 MX1P20591 662 aa18.19■□□□□ 0.5
UBXN11-215ENST00000494942 MCCP23508 829 aa18.19■□□□□ 0.5
UBXN11-215ENST00000494942 ZNF445P59923 1031 aa18.19■□□□□ 0.5
UBXN11-215ENST00000494942 LMBRD1Q9NUN5 540 aa18.19■□□□□ 0.5
UBXN11-215ENST00000494942 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
UBXN11-215ENST00000494942 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
UBXN11-215ENST00000494942 ANKARQ7Z5J8 1434 aa18.18■□□□□ 0.5
UBXN11-215ENST00000494942 TUBGCP6Q96RT7 1819 aa18.18■□□□□ 0.5
UBXN11-215ENST00000494942 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
UBXN11-215ENST00000494942 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
UBXN11-215ENST00000494942 NLRP6P59044 892 aa18.18■□□□□ 0.5
UBXN11-215ENST00000494942 ANAPC15P60006 121 aa18.18■□□□□ 0.5
UBXN11-215ENST00000494942 STRCQ7RTU9 1775 aa18.18■□□□□ 0.5
UBXN11-215ENST00000494942 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
UBXN11-215ENST00000494942 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
UBXN11-215ENST00000494942 AOX1Q06278 1338 aa18.17■□□□□ 0.5
UBXN11-215ENST00000494942 HOXC9P31274 260 aa18.17■□□□□ 0.5
UBXN11-215ENST00000494942 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
UBXN11-215ENST00000494942 ZGPATQ8N5A5 531 aaKnown RBP18.17■□□□□ 0.5
UBXN11-215ENST00000494942 PPP1R9BQ96SB3 815 aa18.17■□□□□ 0.5
UBXN11-215ENST00000494942 PKP1Q13835 747 aa18.16■□□□□ 0.5
UBXN11-215ENST00000494942 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
UBXN11-215ENST00000494942 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
UBXN11-215ENST00000494942 PNMA6EA0A0J9YXQ4 647 aa18.16■□□□□ 0.5
UBXN11-215ENST00000494942 EPB41L2O43491 1005 aaKnown RBP18.16■□□□□ 0.5
UBXN11-215ENST00000494942 NEK4P51957 841 aa18.16■□□□□ 0.5
UBXN11-215ENST00000494942 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
UBXN11-215ENST00000494942 NWD1Q149M9 1564 aa18.14■□□□□ 0.5
UBXN11-215ENST00000494942 CHMLP26374 656 aa18.14■□□□□ 0.49
UBXN11-215ENST00000494942 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.49
UBXN11-215ENST00000494942 IL17REQ8NFR9 667 aa18.14■□□□□ 0.49
UBXN11-215ENST00000494942 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
UBXN11-215ENST00000494942 CAVIN1Q6NZI2 390 aaKnown RBP18.14■□□□□ 0.49
UBXN11-215ENST00000494942 TMX3Q96JJ7 454 aa18.14■□□□□ 0.49
UBXN11-215ENST00000494942 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.49
UBXN11-215ENST00000494942 TRIM6-TRIM34B2RNG4 842 aa18.13■□□□□ 0.49
UBXN11-215ENST00000494942 UBTFL1P0CB47 393 aaPredicted RBP18.13■□□□□ 0.49
UBXN11-215ENST00000494942 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
UBXN11-215ENST00000494942 CUL4AQ13619 759 aa18.12■□□□□ 0.49
UBXN11-215ENST00000494942 INTS4Q96HW7 963 aaKnown RBP18.12■□□□□ 0.49
UBXN11-215ENST00000494942 CHMP4AQ9BY43 222 aa18.12■□□□□ 0.49
UBXN11-215ENST00000494942 USP44Q9H0E7 712 aa18.12■□□□□ 0.49
UBXN11-215ENST00000494942 ERBB4Q15303 1308 aa18.12■□□□□ 0.49
UBXN11-215ENST00000494942 PRPF40AO75400 957 aaKnown RBP18.12■□□□□ 0.49
UBXN11-215ENST00000494942 TSHZ3Q63HK5 1081 aa18.12■□□□□ 0.49
UBXN11-215ENST00000494942 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
UBXN11-215ENST00000494942 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
UBXN11-215ENST00000494942 RAB11FIP3O75154 756 aa18.11■□□□□ 0.49
UBXN11-215ENST00000494942 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
UBXN11-215ENST00000494942 ANO2Q9NQ90 1003 aa18.11■□□□□ 0.49
UBXN11-215ENST00000494942 NECTIN2Q92692 538 aa18.11■□□□□ 0.49
UBXN11-215ENST00000494942 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
UBXN11-215ENST00000494942 HDGFL1Q5TGJ6 251 aa18.1■□□□□ 0.49
UBXN11-215ENST00000494942 ABTB2Q8N961 1025 aa18.1■□□□□ 0.49
UBXN11-215ENST00000494942 NPHP4O75161 1426 aaPredicted RBP18.09■□□□□ 0.49
UBXN11-215ENST00000494942 MBD3O95983 291 aa18.09■□□□□ 0.49
UBXN11-215ENST00000494942 GPT2Q8TD30 523 aa18.09■□□□□ 0.49
UBXN11-215ENST00000494942 BRD1O95696 1058 aa18.08■□□□□ 0.48
UBXN11-215ENST00000494942 HOXB7P09629 217 aa18.07■□□□□ 0.48
UBXN11-215ENST00000494942 PALD1Q9ULE6 856 aa18.07■□□□□ 0.48
UBXN11-215ENST00000494942 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
UBXN11-215ENST00000494942 POLA2Q14181 598 aa18.07■□□□□ 0.48
UBXN11-215ENST00000494942 HS1BP3Q53T59 392 aa18.07■□□□□ 0.48
UBXN11-215ENST00000494942 ZSCAN30Q86W11 494 aa18.06■□□□□ 0.48
UBXN11-215ENST00000494942 NUTM2GQ5VZR2 741 aa18.06■□□□□ 0.48
UBXN11-215ENST00000494942 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
UBXN11-215ENST00000494942 SURF6O75683 361 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms