RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 SPON1Q9HCB6 807 aa19.18■□□□□ 0.66
SCAP-213ENST00000494938 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
SCAP-213ENST00000494938 ATP6V1AP38606 617 aa19.17■□□□□ 0.66
SCAP-213ENST00000494938 LINC00116Q8NCU8 138 aa19.17■□□□□ 0.66
SCAP-213ENST00000494938 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
SCAP-213ENST00000494938 PNPLA7Q6ZV29 1317 aa19.17■□□□□ 0.66
SCAP-213ENST00000494938 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
SCAP-213ENST00000494938 ATF5Q9Y2D1 282 aaPredicted RBP19.16■□□□□ 0.66
SCAP-213ENST00000494938 LY75O60449 1722 aa19.15■□□□□ 0.66
SCAP-213ENST00000494938 PTGER2P43116 358 aa19.15■□□□□ 0.66
SCAP-213ENST00000494938 AMIGO3Q86WK7 504 aa19.15■□□□□ 0.66
SCAP-213ENST00000494938 RBM42Q9BTD8 480 aaKnown RBP19.15■□□□□ 0.66
SCAP-213ENST00000494938 ITGB4P16144 1822 aa19.14■□□□□ 0.65
SCAP-213ENST00000494938 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
SCAP-213ENST00000494938 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
SCAP-213ENST00000494938 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
SCAP-213ENST00000494938 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
SCAP-213ENST00000494938 SMIM5Q71RC9 77 aa19.13■□□□□ 0.65
SCAP-213ENST00000494938 MTFR1LQ9H019 292 aa19.13■□□□□ 0.65
SCAP-213ENST00000494938 SLC16A10Q8TF71 515 aa19.12■□□□□ 0.65
SCAP-213ENST00000494938 SGIP1Q9BQI5 828 aa19.12■□□□□ 0.65
SCAP-213ENST00000494938 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
SCAP-213ENST00000494938 AK7Q96M32 723 aa19.1■□□□□ 0.65
SCAP-213ENST00000494938 CASZ1Q86V15 1759 aa19.09■□□□□ 0.65
SCAP-213ENST00000494938 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
SCAP-213ENST00000494938 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
SCAP-213ENST00000494938 RC3H1Q5TC82 1133 aaKnown RBP19.09■□□□□ 0.65
SCAP-213ENST00000494938 MCM10Q7L590 875 aa19.09■□□□□ 0.65
SCAP-213ENST00000494938 FLAD1Q8NFF5 587 aa19.09■□□□□ 0.65
SCAP-213ENST00000494938 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
SCAP-213ENST00000494938 LRP5O75197 1615 aa19.09■□□□□ 0.65
SCAP-213ENST00000494938 TEFQ10587 303 aa19.08■□□□□ 0.64
SCAP-213ENST00000494938 MRC1P22897 1456 aa19.08■□□□□ 0.64
SCAP-213ENST00000494938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.07■□□□□ 0.64
SCAP-213ENST00000494938 MSH5O43196 834 aa19.07■□□□□ 0.64
SCAP-213ENST00000494938 NFE2L2Q16236 605 aa19.07■□□□□ 0.64
SCAP-213ENST00000494938 RTF1Q92541 710 aaKnown RBP19.07■□□□□ 0.64
SCAP-213ENST00000494938 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
SCAP-213ENST00000494938 GNPATO15228 680 aa19.06■□□□□ 0.64
SCAP-213ENST00000494938 ADAMTS8Q9UP79 889 aa19.06■□□□□ 0.64
SCAP-213ENST00000494938 KCNQ3O43525 872 aa19.05■□□□□ 0.64
SCAP-213ENST00000494938 PHF14O94880 888 aa19.05■□□□□ 0.64
SCAP-213ENST00000494938 NEFMP07197 916 aa19.05■□□□□ 0.64
SCAP-213ENST00000494938 SSFA2P28290 1259 aa19.05■□□□□ 0.64
SCAP-213ENST00000494938 ZNF790Q6PG37 636 aa19.05■□□□□ 0.64
SCAP-213ENST00000494938 DNAJC10Q8IXB1 793 aa19.05■□□□□ 0.64
SCAP-213ENST00000494938 PPP1R1BQ9UD71 204 aaPredicted RBP19.05■□□□□ 0.64
SCAP-213ENST00000494938 CNTNAP4Q9C0A0 1308 aa19.04■□□□□ 0.64
SCAP-213ENST00000494938 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
SCAP-213ENST00000494938 BTBD11A6QL63 1104 aa19.04■□□□□ 0.64
SCAP-213ENST00000494938 RPS6KA4O75676 772 aa19.04■□□□□ 0.64
SCAP-213ENST00000494938 CCDC184Q52MB2 194 aa19.04■□□□□ 0.64
SCAP-213ENST00000494938 INTS5Q6P9B9 1019 aaKnown RBP19.04■□□□□ 0.64
SCAP-213ENST00000494938 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
SCAP-213ENST00000494938 CYP19A1P11511 503 aaPredicted RBP19.03■□□□□ 0.64
SCAP-213ENST00000494938 CRKLP46109 303 aaKnown RBP19.03■□□□□ 0.64
SCAP-213ENST00000494938 ZNF496Q96IT1 587 aaPredicted RBP19.03■□□□□ 0.64
SCAP-213ENST00000494938 RTCBQ9Y3I0 505 aaKnown RBP19.03■□□□□ 0.64
SCAP-213ENST00000494938 C4BP0C0L5 1744 aa19.03■□□□□ 0.64
SCAP-213ENST00000494938 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.64
SCAP-213ENST00000494938 TRAPPC3LQ5T215 181 aa19.02■□□□□ 0.64
SCAP-213ENST00000494938 CCDC146Q8IYE0 955 aa19.02■□□□□ 0.64
SCAP-213ENST00000494938 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
SCAP-213ENST00000494938 ARXQ96QS3 562 aa19.02■□□□□ 0.64
SCAP-213ENST00000494938 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
SCAP-213ENST00000494938 TMPOP42166 694 aaKnown RBP19.01■□□□□ 0.63
SCAP-213ENST00000494938 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
SCAP-213ENST00000494938 MSL1Q68DK7 614 aa19.01■□□□□ 0.63
SCAP-213ENST00000494938 ARHGEF1Q92888 912 aaKnown RBP19.01■□□□□ 0.63
SCAP-213ENST00000494938 C5P01031 1676 aa19.01■□□□□ 0.63
SCAP-213ENST00000494938 KCPQ6ZWJ8 1503 aa19■□□□□ 0.63
SCAP-213ENST00000494938 RIPK4P57078 832 aa19■□□□□ 0.63
SCAP-213ENST00000494938 RUNDC1Q96C34 613 aa19■□□□□ 0.63
SCAP-213ENST00000494938 THUMPD2Q9BTF0 503 aaKnown RBP19■□□□□ 0.63
SCAP-213ENST00000494938 ADRA2BP18089 450 aa18.99■□□□□ 0.63
SCAP-213ENST00000494938 POLD1P28340 1107 aa18.99■□□□□ 0.63
SCAP-213ENST00000494938 MIS18AQ9NYP9 233 aa18.99■□□□□ 0.63
SCAP-213ENST00000494938 TAF1LQ8IZX4 1826 aa18.98■□□□□ 0.63
SCAP-213ENST00000494938 ANP32CO43423 234 aa18.98■□□□□ 0.63
SCAP-213ENST00000494938 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
SCAP-213ENST00000494938 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
SCAP-213ENST00000494938 CCDC87Q9NVE4 849 aa18.98■□□□□ 0.63
SCAP-213ENST00000494938 ZNF831Q5JPB2 1677 aa18.98■□□□□ 0.63
SCAP-213ENST00000494938 QSER1Q2KHR3 1735 aa18.97■□□□□ 0.63
SCAP-213ENST00000494938 HEG1Q9ULI3 1381 aa18.97■□□□□ 0.63
SCAP-213ENST00000494938 SYT17Q9BSW7 474 aa18.97■□□□□ 0.63
SCAP-213ENST00000494938 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
SCAP-213ENST00000494938 TEX13AQ9BXU3 409 aaPredicted RBP18.96■□□□□ 0.63
SCAP-213ENST00000494938 TUBGCP6Q96RT7 1819 aa18.95■□□□□ 0.62
SCAP-213ENST00000494938 STARD3NLO95772 234 aa18.95■□□□□ 0.62
SCAP-213ENST00000494938 RFC4P35249 363 aa18.95■□□□□ 0.62
SCAP-213ENST00000494938 ZBTB1Q9Y2K1 713 aa18.95■□□□□ 0.62
SCAP-213ENST00000494938 SOS1Q07889 1333 aaPredicted RBP18.95■□□□□ 0.62
SCAP-213ENST00000494938 PRAMEF22A3QJZ6 481 aa18.94■□□□□ 0.62
SCAP-213ENST00000494938 PNISRQ8TF01 805 aaKnown RBP18.94■□□□□ 0.62
SCAP-213ENST00000494938 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
SCAP-213ENST00000494938 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
SCAP-213ENST00000494938 GYS1P13807 737 aa18.93■□□□□ 0.62
SCAP-213ENST00000494938 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
SCAP-213ENST00000494938 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms