RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
VTI1A-208ENST00000494728 PER1O15534 1290 aaPredicted RBP15.94■□□□□ 0.14
VTI1A-208ENST00000494728 SIK1P57059 783 aa15.94■□□□□ 0.14
VTI1A-208ENST00000494728 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
VTI1A-208ENST00000494728 ADAMTS7Q9UKP4 1686 aa15.94■□□□□ 0.14
VTI1A-208ENST00000494728 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
VTI1A-208ENST00000494728 POLD1P28340 1107 aa15.93■□□□□ 0.14
VTI1A-208ENST00000494728 IL13P35225 146 aa15.93■□□□□ 0.14
VTI1A-208ENST00000494728 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
VTI1A-208ENST00000494728 ATG3Q9NT62 314 aa15.93■□□□□ 0.14
VTI1A-208ENST00000494728 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
VTI1A-208ENST00000494728 PHF14O94880 888 aa15.91■□□□□ 0.14
VTI1A-208ENST00000494728 SULT6B1Q6IMI4 303 aa15.91■□□□□ 0.14
VTI1A-208ENST00000494728 AK7Q96M32 723 aa15.91■□□□□ 0.14
VTI1A-208ENST00000494728 KIF13BQ9NQT8 1826 aa15.91■□□□□ 0.14
VTI1A-208ENST00000494728 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
VTI1A-208ENST00000494728 MRC1P22897 1456 aa15.9■□□□□ 0.14
VTI1A-208ENST00000494728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.89■□□□□ 0.13
VTI1A-208ENST00000494728 MTHFSP49914 203 aa15.89■□□□□ 0.13
VTI1A-208ENST00000494728 CC2D1BQ5T0F9 858 aaKnown RBP15.89■□□□□ 0.13
VTI1A-208ENST00000494728 DCAF5Q96JK2 942 aa15.89■□□□□ 0.13
VTI1A-208ENST00000494728 UBR2Q8IWV8 1755 aa15.89■□□□□ 0.13
VTI1A-208ENST00000494728 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-208ENST00000494728 ERVV-2B6SEH9 535 aa15.88■□□□□ 0.13
VTI1A-208ENST00000494728 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
VTI1A-208ENST00000494728 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
VTI1A-208ENST00000494728 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
VTI1A-208ENST00000494728 GNPATO15228 680 aa15.87■□□□□ 0.13
VTI1A-208ENST00000494728 HMOX1P09601 288 aa15.86■□□□□ 0.13
VTI1A-208ENST00000494728 YBX3P16989 372 aaKnown RBP eCLIP15.86■□□□□ 0.13
VTI1A-208ENST00000494728 SSFA2P28290 1259 aa15.86■□□□□ 0.13
VTI1A-208ENST00000494728 AMOTQ4VCS5 1084 aa15.86■□□□□ 0.13
VTI1A-208ENST00000494728 FLAD1Q8NFF5 587 aa15.86■□□□□ 0.13
VTI1A-208ENST00000494728 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
VTI1A-208ENST00000494728 KCPQ6ZWJ8 1503 aa15.85■□□□□ 0.13
VTI1A-208ENST00000494728 CNGB1Q14028 1251 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-208ENST00000494728 PELP1Q8IZL8 1130 aaKnown RBP15.85■□□□□ 0.13
VTI1A-208ENST00000494728 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
VTI1A-208ENST00000494728 NPC1L1Q9UHC9 1359 aa15.85■□□□□ 0.13
VTI1A-208ENST00000494728 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
VTI1A-208ENST00000494728 CABP4P57796 275 aa15.84■□□□□ 0.13
VTI1A-208ENST00000494728 GPR162Q16538 588 aa15.84■□□□□ 0.13
VTI1A-208ENST00000494728 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
VTI1A-208ENST00000494728 CEP350Q5VT06 3117 aa15.83■□□□□ 0.12
VTI1A-208ENST00000494728 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
VTI1A-208ENST00000494728 NFATC2IPQ8NCF5 419 aa15.82■□□□□ 0.12
VTI1A-208ENST00000494728 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
VTI1A-208ENST00000494728 PTCD1O75127 700 aaKnown RBP15.81■□□□□ 0.12
VTI1A-208ENST00000494728 LGR6Q9HBX8 967 aa15.81■□□□□ 0.12
VTI1A-208ENST00000494728 DIAPH1O60610 1272 aaKnown RBP15.8■□□□□ 0.12
VTI1A-208ENST00000494728 MTHFSDQ2M296 383 aaKnown RBP15.8■□□□□ 0.12
VTI1A-208ENST00000494728 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
VTI1A-208ENST00000494728 PXDNLA1KZ92 1463 aa15.79■□□□□ 0.12
VTI1A-208ENST00000494728 AKAP4Q5JQC9 854 aa15.79■□□□□ 0.12
VTI1A-208ENST00000494728 WWC3Q9ULE0 1092 aa15.79■□□□□ 0.12
VTI1A-208ENST00000494728 C10orf71Q711Q0 1435 aa15.78■□□□□ 0.12
VTI1A-208ENST00000494728 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
VTI1A-208ENST00000494728 HMGB2P26583 209 aaKnown RBP15.78■□□□□ 0.12
VTI1A-208ENST00000494728 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
VTI1A-208ENST00000494728 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
VTI1A-208ENST00000494728 RTCBQ9Y3I0 505 aaKnown RBP15.78■□□□□ 0.12
VTI1A-208ENST00000494728 RNMTO43148 476 aaKnown RBP15.77■□□□□ 0.12
VTI1A-208ENST00000494728 MMP10P09238 476 aa15.77■□□□□ 0.12
VTI1A-208ENST00000494728 CRKLP46109 303 aaKnown RBP15.77■□□□□ 0.12
VTI1A-208ENST00000494728 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
VTI1A-208ENST00000494728 RPS6KA4O75676 772 aa15.76■□□□□ 0.11
VTI1A-208ENST00000494728 GYS1P13807 737 aa15.76■□□□□ 0.11
VTI1A-208ENST00000494728 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
VTI1A-208ENST00000494728 ARFGEF1Q9Y6D6 1849 aa15.75■□□□□ 0.11
VTI1A-208ENST00000494728 DLG5Q8TDM6 1919 aa15.75■□□□□ 0.11
VTI1A-208ENST00000494728 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
VTI1A-208ENST00000494728 DNAJC10Q8IXB1 793 aa15.75■□□□□ 0.11
VTI1A-208ENST00000494728 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
VTI1A-208ENST00000494728 NRXN2Q9P2S2 1712 aa15.74■□□□□ 0.11
VTI1A-208ENST00000494728 SCN7AQ01118 1682 aa15.74■□□□□ 0.11
VTI1A-208ENST00000494728 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
VTI1A-208ENST00000494728 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
VTI1A-208ENST00000494728 ADCY9O60503 1353 aa15.73■□□□□ 0.11
VTI1A-208ENST00000494728 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
VTI1A-208ENST00000494728 DLEC1Q9Y238 1755 aa15.72■□□□□ 0.11
VTI1A-208ENST00000494728 ATP10DQ9P241 1426 aa15.71■□□□□ 0.11
VTI1A-208ENST00000494728 GRIN3BO60391 1043 aa15.71■□□□□ 0.11
VTI1A-208ENST00000494728 RFC4P35249 363 aa15.71■□□□□ 0.11
VTI1A-208ENST00000494728 DDR1Q08345 913 aa15.71■□□□□ 0.11
VTI1A-208ENST00000494728 FKBP8Q14318 412 aa15.71■□□□□ 0.11
VTI1A-208ENST00000494728 SOS1Q07889 1333 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-208ENST00000494728 BCORQ6W2J9 1755 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 CYP19A1P11511 503 aaPredicted RBP15.7■□□□□ 0.1
VTI1A-208ENST00000494728 PPP2R1AP30153 589 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 IL17REQ8NFR9 667 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 RSPH6AQ9H0K4 717 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 CCDC87Q9NVE4 849 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
VTI1A-208ENST00000494728 ANKRD31Q8N7Z5 1873 aa15.69■□□□□ 0.1
VTI1A-208ENST00000494728 NLGN1Q8N2Q7 840 aa15.69■□□□□ 0.1
VTI1A-208ENST00000494728 COL15A1P39059 1388 aa15.69■□□□□ 0.1
VTI1A-208ENST00000494728 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
VTI1A-208ENST00000494728 PRKAR2BP31323 418 aa15.68■□□□□ 0.1
VTI1A-208ENST00000494728 COL11A2P13942 1736 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms