RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 MSL1Q68DK7 614 aa24.95■■□□□ 1.58
SNX8-209ENST00000494722 SULT6B1Q6IMI4 303 aa24.95■■□□□ 1.58
SNX8-209ENST00000494722 LINC00116Q8NCU8 138 aa24.95■■□□□ 1.58
SNX8-209ENST00000494722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.94■■□□□ 1.58
SNX8-209ENST00000494722 MTHFSP49914 203 aa24.93■■□□□ 1.58
SNX8-209ENST00000494722 CABP4P57796 275 aa24.93■■□□□ 1.58
SNX8-209ENST00000494722 AEBP1Q8IUX7 1158 aa24.93■■□□□ 1.58
SNX8-209ENST00000494722 CD2APQ9Y5K6 639 aa24.93■■□□□ 1.58
SNX8-209ENST00000494722 PER1O15534 1290 aaPredicted RBP24.92■■□□□ 1.58
SNX8-209ENST00000494722 PHF14O94880 888 aa24.92■■□□□ 1.58
SNX8-209ENST00000494722 ITPK1Q13572 414 aa24.92■■□□□ 1.58
SNX8-209ENST00000494722 NLGN2Q8NFZ4 835 aa24.92■■□□□ 1.58
SNX8-209ENST00000494722 KDM6AO15550 1401 aaPredicted RBP24.91■■□□□ 1.58
SNX8-209ENST00000494722 GNPATO15228 680 aa24.9■■□□□ 1.58
SNX8-209ENST00000494722 PELP1Q8IZL8 1130 aaKnown RBP24.9■■□□□ 1.58
SNX8-209ENST00000494722 GOLGB1Q14789 3259 aaKnown RBP24.88■■□□□ 1.57
SNX8-209ENST00000494722 GRIN3BO60391 1043 aa24.88■■□□□ 1.57
SNX8-209ENST00000494722 AMIGO3Q86WK7 504 aa24.88■■□□□ 1.57
SNX8-209ENST00000494722 RBM42Q9BTD8 480 aaKnown RBP24.88■■□□□ 1.57
SNX8-209ENST00000494722 NPC1L1Q9UHC9 1359 aa24.88■■□□□ 1.57
SNX8-209ENST00000494722 SCN11AQ9UI33 1791 aa24.88■■□□□ 1.57
SNX8-209ENST00000494722 COL5A3P25940 1745 aaPredicted RBP24.87■■□□□ 1.57
SNX8-209ENST00000494722 ZNF784Q8NCA9 323 aaPredicted RBP24.87■■□□□ 1.57
SNX8-209ENST00000494722 CC2D1BQ5T0F9 858 aaKnown RBP24.86■■□□□ 1.57
SNX8-209ENST00000494722 RC3H1Q5TC82 1133 aaKnown RBP24.86■■□□□ 1.57
SNX8-209ENST00000494722 RTCBQ9Y3I0 505 aaKnown RBP24.86■■□□□ 1.57
SNX8-209ENST00000494722 ADRA2BP18089 450 aa24.85■■□□□ 1.57
SNX8-209ENST00000494722 AKAP4Q5JQC9 854 aa24.85■■□□□ 1.57
SNX8-209ENST00000494722 CNTNAP4Q9C0A0 1308 aa24.85■■□□□ 1.57
SNX8-209ENST00000494722 DIAPH1O60610 1272 aaKnown RBP24.84■■□□□ 1.57
SNX8-209ENST00000494722 TRAPPC3LQ5T215 181 aa24.84■■□□□ 1.57
SNX8-209ENST00000494722 NFATC2IPQ8NCF5 419 aa24.83■■□□□ 1.57
SNX8-209ENST00000494722 SLC4A9Q96Q91 983 aa24.83■■□□□ 1.57
SNX8-209ENST00000494722 SMIM5Q71RC9 77 aa24.82■■□□□ 1.56
SNX8-209ENST00000494722 VIRMAQ69YN4 1812 aaKnown RBP24.8■■□□□ 1.56
SNX8-209ENST00000494722 CICQ96RK0 1608 aaPredicted RBP24.79■■□□□ 1.56
SNX8-209ENST00000494722 RPS6KA4O75676 772 aa24.79■■□□□ 1.56
SNX8-209ENST00000494722 HMOX1P09601 288 aa24.79■■□□□ 1.56
SNX8-209ENST00000494722 YBX3P16989 372 aaKnown RBP eCLIP24.79■■□□□ 1.56
SNX8-209ENST00000494722 NLGN1Q8N2Q7 840 aa24.79■■□□□ 1.56
SNX8-209ENST00000494722 MYH14Q7Z406 1995 aaKnown RBP24.78■■□□□ 1.56
SNX8-209ENST00000494722 PTCD1O75127 700 aaKnown RBP24.78■■□□□ 1.56
SNX8-209ENST00000494722 RFC4P35249 363 aa24.77■■□□□ 1.56
SNX8-209ENST00000494722 SLC52A2Q9HAB3 445 aa24.77■■□□□ 1.56
SNX8-209ENST00000494722 ARHGEF1Q92888 912 aaKnown RBP24.76■■□□□ 1.55
SNX8-209ENST00000494722 MRC1P22897 1456 aa24.76■■□□□ 1.55
SNX8-209ENST00000494722 MMP10P09238 476 aa24.75■■□□□ 1.55
SNX8-209ENST00000494722 TJP1Q07157 1748 aa24.74■■□□□ 1.55
SNX8-209ENST00000494722 KIF13BQ9NQT8 1826 aa24.73■■□□□ 1.55
SNX8-209ENST00000494722 C4AP0C0L4 1744 aa24.73■■□□□ 1.55
SNX8-209ENST00000494722 ADAMTS7Q9UKP4 1686 aa24.73■■□□□ 1.55
SNX8-209ENST00000494722 COL3A1P02461 1466 aaPredicted RBP24.73■■□□□ 1.55
SNX8-209ENST00000494722 RNMTO43148 476 aaKnown RBP24.73■■□□□ 1.55
SNX8-209ENST00000494722 MTHFSDQ2M296 383 aaKnown RBP24.73■■□□□ 1.55
SNX8-209ENST00000494722 CRKLP46109 303 aaKnown RBP24.72■■□□□ 1.55
SNX8-209ENST00000494722 LGR6Q9HBX8 967 aa24.72■■□□□ 1.55
SNX8-209ENST00000494722 U2SURPO15042 1029 aaKnown RBP24.7■■□□□ 1.54
SNX8-209ENST00000494722 GYS1P13807 737 aa24.7■■□□□ 1.54
SNX8-209ENST00000494722 CNGB1Q14028 1251 aaPredicted RBP24.7■■□□□ 1.54
SNX8-209ENST00000494722 CFAP53Q96M91 514 aa24.7■■□□□ 1.54
SNX8-209ENST00000494722 TGFB2P61812 414 aa24.69■■□□□ 1.54
SNX8-209ENST00000494722 CCDC87Q9NVE4 849 aa24.69■■□□□ 1.54
SNX8-209ENST00000494722 PARP3Q9Y6F1 533 aa24.69■■□□□ 1.54
SNX8-209ENST00000494722 GAS2L2Q8NHY3 880 aa24.68■■□□□ 1.54
SNX8-209ENST00000494722 VSIG10Q8N0Z9 540 aa24.66■■□□□ 1.54
SNX8-209ENST00000494722 C10orf71Q711Q0 1435 aa24.66■■□□□ 1.54
SNX8-209ENST00000494722 INTS5Q6P9B9 1019 aaKnown RBP24.65■■□□□ 1.54
SNX8-209ENST00000494722 DNAJC10Q8IXB1 793 aa24.65■■□□□ 1.54
SNX8-209ENST00000494722 USP42Q9H9J4 1324 aaKnown RBP24.64■■□□□ 1.54
SNX8-209ENST00000494722 NUDCQ9Y266 331 aa24.64■■□□□ 1.54
SNX8-209ENST00000494722 KCPQ6ZWJ8 1503 aa24.64■■□□□ 1.53
SNX8-209ENST00000494722 UBR2Q8IWV8 1755 aa24.64■■□□□ 1.53
SNX8-209ENST00000494722 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.53
SNX8-209ENST00000494722 GNAT3A8MTJ3 354 aa24.63■■□□□ 1.53
SNX8-209ENST00000494722 GIGYF1O75420 1035 aaPredicted RBP24.63■■□□□ 1.53
SNX8-209ENST00000494722 SLC39A6Q13433 755 aa24.63■■□□□ 1.53
SNX8-209ENST00000494722 KIAA1551Q9HCM1 1747 aa24.63■■□□□ 1.53
SNX8-209ENST00000494722 N4BP2Q86UW6 1770 aaPredicted RBP24.62■■□□□ 1.53
SNX8-209ENST00000494722 CYP19A1P11511 503 aaPredicted RBP24.62■■□□□ 1.53
SNX8-209ENST00000494722 C1QTNF8P60827 252 aa24.62■■□□□ 1.53
SNX8-209ENST00000494722 TEFQ10587 303 aa24.62■■□□□ 1.53
SNX8-209ENST00000494722 TTC5Q8N0Z6 440 aa24.62■■□□□ 1.53
SNX8-209ENST00000494722 ZPR1O75312 459 aa24.61■■□□□ 1.53
SNX8-209ENST00000494722 SOS1Q07889 1333 aaPredicted RBP24.61■■□□□ 1.53
SNX8-209ENST00000494722 SRP68Q9UHB9 627 aaKnown RBP24.6■■□□□ 1.53
SNX8-209ENST00000494722 FKBP8Q14318 412 aa24.59■■□□□ 1.53
SNX8-209ENST00000494722 WWC3Q9ULE0 1092 aa24.59■■□□□ 1.53
SNX8-209ENST00000494722 ATP10DQ9P241 1426 aa24.59■■□□□ 1.53
SNX8-209ENST00000494722 SIPA1L3O60292 1781 aaPredicted RBP24.58■■□□□ 1.53
SNX8-209ENST00000494722 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
SNX8-209ENST00000494722 ADCY9O60503 1353 aa24.57■■□□□ 1.52
SNX8-209ENST00000494722 STARD3NLO95772 234 aa24.57■■□□□ 1.52
SNX8-209ENST00000494722 PPP2R1AP30153 589 aa24.57■■□□□ 1.52
SNX8-209ENST00000494722 IL17REQ8NFR9 667 aa24.57■■□□□ 1.52
SNX8-209ENST00000494722 BRCA1P38398 1863 aaKnown RBP24.57■■□□□ 1.52
SNX8-209ENST00000494722 A0A0G2JLW4 131 aa24.56■■□□□ 1.52
SNX8-209ENST00000494722 PRKAR2BP31323 418 aa24.56■■□□□ 1.52
SNX8-209ENST00000494722 TEX13AQ9BXU3 409 aaPredicted RBP24.56■■□□□ 1.52
SNX8-209ENST00000494722 RSPH6AQ9H0K4 717 aa24.56■■□□□ 1.52
SNX8-209ENST00000494722 NARFQ9UHQ1 456 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms