RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 TAS1R3Q7RTX0 852 aa10.57□□□□□ -0.72
NCL-210ENST00000494618 CCDC97Q96F63 343 aaPredicted RBP10.57□□□□□ -0.72
NCL-210ENST00000494618 SERTAD1Q9UHV2 236 aa10.57□□□□□ -0.72
NCL-210ENST00000494618 SLC35F4A4IF30 521 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 PPFIA3O75145 1194 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 WFS1O76024 890 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 RHOQP17081 205 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 SMTNP53814 917 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 FHDC1Q9C0D6 1143 aaPredicted RBP10.56□□□□□ -0.72
NCL-210ENST00000494618 SERPINA10Q9UK55 444 aa10.56□□□□□ -0.72
NCL-210ENST00000494618 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 ZBTB7BO15156 539 aaPredicted RBP10.55□□□□□ -0.72
NCL-210ENST00000494618 CLDN10P78369 228 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 NBPF10Q6P3W6 841 aaKnown RBP10.55□□□□□ -0.72
NCL-210ENST00000494618 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 NBPF15Q8N660 670 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 TPCN2Q8NHX9 752 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
NCL-210ENST00000494618 H3BM21 787 aa10.54□□□□□ -0.72
NCL-210ENST00000494618 VEGFBP49765 207 aa10.54□□□□□ -0.72
NCL-210ENST00000494618 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
NCL-210ENST00000494618 PPARGC1BQ86YN6 1023 aaKnown RBP10.54□□□□□ -0.72
NCL-210ENST00000494618 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
NCL-210ENST00000494618 A6NJY4 79 aa10.53□□□□□ -0.72
NCL-210ENST00000494618 RFX1P22670 979 aa10.53□□□□□ -0.72
NCL-210ENST00000494618 KANK4Q5T7N3 995 aaPredicted RBP10.53□□□□□ -0.72
NCL-210ENST00000494618 SIX5Q8N196 739 aa10.53□□□□□ -0.72
NCL-210ENST00000494618 RHBDD1Q8TEB9 315 aa10.53□□□□□ -0.72
NCL-210ENST00000494618 IRF7Q92985 503 aa10.53□□□□□ -0.72
NCL-210ENST00000494618 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
NCL-210ENST00000494618 ZNF358Q9NW07 568 aa10.53□□□□□ -0.72
NCL-210ENST00000494618 TIMMDC1Q9NPL8 285 aa10.52□□□□□ -0.73
NCL-210ENST00000494618 KIAA1024Q9UPX6 916 aa10.52□□□□□ -0.73
NCL-210ENST00000494618 DYRK1BQ9Y463 629 aa10.52□□□□□ -0.73
NCL-210ENST00000494618 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
NCL-210ENST00000494618 CDK2AP1O14519 115 aa10.51□□□□□ -0.73
NCL-210ENST00000494618 MTFR1Q15390 333 aa10.51□□□□□ -0.73
NCL-210ENST00000494618 FAM196BA6NMK8 535 aa10.5□□□□□ -0.73
NCL-210ENST00000494618 ITGA6P23229 1130 aa10.5□□□□□ -0.73
NCL-210ENST00000494618 PHKA2P46019 1235 aa10.5□□□□□ -0.73
NCL-210ENST00000494618 NIFKQ9BYG3 293 aaKnown RBP10.5□□□□□ -0.73
NCL-210ENST00000494618 M0R2N6 131 aa10.49□□□□□ -0.73
NCL-210ENST00000494618 C4orf17Q53FE4 359 aa10.49□□□□□ -0.73
NCL-210ENST00000494618 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
NCL-210ENST00000494618 USP17L15C9J2P7 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L10C9JJH3 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L13C9JLJ4 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L12C9JPN9 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L11C9JVI0 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L21D6R901 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L18D6R9N7 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L22D6RA61 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L17D6RBQ6 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L19D6RCP7 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L20D6RJB6 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 SEC13P55735 322 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 PTK7Q13308 1070 aa10.48□□□□□ -0.73
NCL-210ENST00000494618 A0A1B0GTH6 734 aa10.47□□□□□ -0.73
NCL-210ENST00000494618 CRTC2Q53ET0 693 aaPredicted RBP10.47□□□□□ -0.73
NCL-210ENST00000494618 RIPOR1Q6ZS17 1223 aa10.47□□□□□ -0.73
NCL-210ENST00000494618 NANOS1Q8WY41 292 aaKnown RBP10.47□□□□□ -0.73
NCL-210ENST00000494618 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
NCL-210ENST00000494618 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
NCL-210ENST00000494618 SCHIP1Q9P0W5 487 aaPredicted RBP10.47□□□□□ -0.73
NCL-210ENST00000494618 CDC14CA4D256 554 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 H7C1W4 665 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 F11P03951 625 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 CDCA8Q53HL2 280 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 ANKMY2Q8IV38 441 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 TNS4Q8IZW8 715 aa10.46□□□□□ -0.73
NCL-210ENST00000494618 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
NCL-210ENST00000494618 PLA2G4AP47712 749 aa10.45□□□□□ -0.74
NCL-210ENST00000494618 DPYDQ12882 1025 aa10.45□□□□□ -0.74
NCL-210ENST00000494618 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
NCL-210ENST00000494618 CCDC82Q8N4S0 544 aa10.45□□□□□ -0.74
NCL-210ENST00000494618 TIMELESSQ9UNS1 1208 aa10.45□□□□□ -0.74
NCL-210ENST00000494618 IQSEC3Q9UPP2 1182 aaPredicted RBP10.45□□□□□ -0.74
NCL-210ENST00000494618 DKK1O94907 266 aa10.44□□□□□ -0.74
NCL-210ENST00000494618 LCE2AQ5TA79 106 aaPredicted RBP10.44□□□□□ -0.74
NCL-210ENST00000494618 AIDAQ96BJ3 306 aa10.44□□□□□ -0.74
NCL-210ENST00000494618 CHMP3Q9Y3E7 222 aa10.44□□□□□ -0.74
NCL-210ENST00000494618 CSB-PGBD3P0DP91 1061 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 EPHA4P54764 986 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 NBPF1Q3BBV0 1214 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 PGBD3Q8N328 593 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 TSEN2Q8NCE0 465 aaKnown RBP10.43□□□□□ -0.74
NCL-210ENST00000494618 FAM200AQ8TCP9 573 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 HINFPQ9BQA5 517 aa10.43□□□□□ -0.74
NCL-210ENST00000494618 ERBB4Q15303 1308 aa10.42□□□□□ -0.74
NCL-210ENST00000494618 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.42□□□□□ -0.74
NCL-210ENST00000494618 FOXK2Q01167 660 aa10.42□□□□□ -0.74
NCL-210ENST00000494618 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms