RNA–Protein interactions for RNA: ENST00000494586.5

CCSER2-208, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-208ENST00000494586 KRT27Q7Z3Y8 459 aa11.84□□□□□ -0.51
CCSER2-208ENST00000494586 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
CCSER2-208ENST00000494586 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
CCSER2-208ENST00000494586 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
CCSER2-208ENST00000494586 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
CCSER2-208ENST00000494586 TSPYL4Q9UJ04 414 aa11.83□□□□□ -0.52
CCSER2-208ENST00000494586 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
CCSER2-208ENST00000494586 HEG1Q9ULI3 1381 aa11.82□□□□□ -0.52
CCSER2-208ENST00000494586 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
CCSER2-208ENST00000494586 HOXB7P09629 217 aa11.82□□□□□ -0.52
CCSER2-208ENST00000494586 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
CCSER2-208ENST00000494586 PIGBQ92521 554 aa11.82□□□□□ -0.52
CCSER2-208ENST00000494586 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
CCSER2-208ENST00000494586 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
CCSER2-208ENST00000494586 A0A0G2JS52 829 aa11.81□□□□□ -0.52
CCSER2-208ENST00000494586 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
CCSER2-208ENST00000494586 EIF4A1P60842 406 aaKnown RBP11.81□□□□□ -0.52
CCSER2-208ENST00000494586 MYT1Q01538 1121 aa11.81□□□□□ -0.52
CCSER2-208ENST00000494586 VSIG10Q8N0Z9 540 aa11.81□□□□□ -0.52
CCSER2-208ENST00000494586 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
CCSER2-208ENST00000494586 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
CCSER2-208ENST00000494586 LAS1LQ9Y4W2 734 aaKnown RBP11.8□□□□□ -0.52
CCSER2-208ENST00000494586 VAMP4O75379 141 aa11.79□□□□□ -0.52
CCSER2-208ENST00000494586 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
CCSER2-208ENST00000494586 EXOSC9Q06265 439 aaKnown RBP11.79□□□□□ -0.52
CCSER2-208ENST00000494586 SMARCC1Q92922 1105 aaPredicted RBP11.79□□□□□ -0.52
CCSER2-208ENST00000494586 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
CCSER2-208ENST00000494586 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
CCSER2-208ENST00000494586 RGS12O14924 1447 aa11.78□□□□□ -0.52
CCSER2-208ENST00000494586 SIPA1L3O60292 1781 aaPredicted RBP11.78□□□□□ -0.52
CCSER2-208ENST00000494586 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
CCSER2-208ENST00000494586 ALDH1L2Q3SY69 923 aa11.78□□□□□ -0.52
CCSER2-208ENST00000494586 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
CCSER2-208ENST00000494586 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
CCSER2-208ENST00000494586 TEX13AQ9BXU3 409 aaPredicted RBP11.78□□□□□ -0.52
CCSER2-208ENST00000494586 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
CCSER2-208ENST00000494586 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.53
CCSER2-208ENST00000494586 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
CCSER2-208ENST00000494586 C8orf58Q8NAV2 365 aa11.77□□□□□ -0.53
CCSER2-208ENST00000494586 KCNQ3O43525 872 aa11.76□□□□□ -0.53
CCSER2-208ENST00000494586 KCNQ2O43526 872 aa11.76□□□□□ -0.53
CCSER2-208ENST00000494586 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
CCSER2-208ENST00000494586 ASAP1Q9ULH1 1129 aa11.76□□□□□ -0.53
CCSER2-208ENST00000494586 PLSCR1O15162 318 aa11.75□□□□□ -0.53
CCSER2-208ENST00000494586 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
CCSER2-208ENST00000494586 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
CCSER2-208ENST00000494586 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
CCSER2-208ENST00000494586 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
CCSER2-208ENST00000494586 KDM3BQ7LBC6 1761 aa11.74□□□□□ -0.53
CCSER2-208ENST00000494586 RARSP54136 660 aaKnown RBP11.74□□□□□ -0.53
CCSER2-208ENST00000494586 CCDC125Q86Z20 511 aa11.74□□□□□ -0.53
CCSER2-208ENST00000494586 RCAN3Q9UKA8 241 aa11.74□□□□□ -0.53
CCSER2-208ENST00000494586 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
CCSER2-208ENST00000494586 TOGARAM1Q9Y4F4 1720 aa11.74□□□□□ -0.53
CCSER2-208ENST00000494586 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
CCSER2-208ENST00000494586 CCDC30Q5VVM6 783 aa11.73□□□□□ -0.53
CCSER2-208ENST00000494586 RNF123Q5XPI4 1314 aa11.73□□□□□ -0.53
CCSER2-208ENST00000494586 VIRMAQ69YN4 1812 aaKnown RBP11.73□□□□□ -0.53
CCSER2-208ENST00000494586 ITGB4P16144 1822 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 KCPQ6ZWJ8 1503 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 LOC102724428A0A0B4J2F2 783 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 SIK1P57059 783 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 BRWD3Q6RI45 1802 aa11.72□□□□□ -0.53
CCSER2-208ENST00000494586 NHSQ6T4R5 1651 aa11.71□□□□□ -0.53
CCSER2-208ENST00000494586 PALLDQ8WX93 1383 aa11.71□□□□□ -0.53
CCSER2-208ENST00000494586 ELL2O00472 640 aaPredicted RBP11.71□□□□□ -0.53
CCSER2-208ENST00000494586 STARD3NLO95772 234 aa11.71□□□□□ -0.53
CCSER2-208ENST00000494586 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
CCSER2-208ENST00000494586 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
CCSER2-208ENST00000494586 DBF4Q9UBU7 674 aaPredicted RBP11.71□□□□□ -0.53
CCSER2-208ENST00000494586 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
CCSER2-208ENST00000494586 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.54
CCSER2-208ENST00000494586 UBR2Q8IWV8 1755 aa11.7□□□□□ -0.54
CCSER2-208ENST00000494586 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
CCSER2-208ENST00000494586 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
CCSER2-208ENST00000494586 TRIM37O94972 964 aa11.7□□□□□ -0.54
CCSER2-208ENST00000494586 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
CCSER2-208ENST00000494586 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
CCSER2-208ENST00000494586 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
CCSER2-208ENST00000494586 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.54
CCSER2-208ENST00000494586 IPO8O15397 1037 aaKnown RBP11.69□□□□□ -0.54
CCSER2-208ENST00000494586 CYP19A1P11511 503 aaPredicted RBP11.69□□□□□ -0.54
CCSER2-208ENST00000494586 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
CCSER2-208ENST00000494586 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
CCSER2-208ENST00000494586 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
CCSER2-208ENST00000494586 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
CCSER2-208ENST00000494586 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
CCSER2-208ENST00000494586 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
CCSER2-208ENST00000494586 SBF2Q86WG5 1849 aa11.69□□□□□ -0.54
CCSER2-208ENST00000494586 CICQ96RK0 1608 aaPredicted RBP11.68□□□□□ -0.54
CCSER2-208ENST00000494586 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
CCSER2-208ENST00000494586 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
CCSER2-208ENST00000494586 PDIA6Q15084 440 aa11.68□□□□□ -0.54
CCSER2-208ENST00000494586 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.68□□□□□ -0.54
CCSER2-208ENST00000494586 PTPRCP08575 1304 aa11.67□□□□□ -0.54
CCSER2-208ENST00000494586 KIF16BQ96L93 1317 aa11.67□□□□□ -0.54
CCSER2-208ENST00000494586 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
CCSER2-208ENST00000494586 BCAR3O75815 825 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms