RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 ERVV-2B6SEH9 535 aa18.27■□□□□ 0.52
UBE3C-207ENST00000494532 CABP4P57796 275 aa18.27■□□□□ 0.52
UBE3C-207ENST00000494532 SEPT12Q8IYM1 358 aa18.27■□□□□ 0.52
UBE3C-207ENST00000494532 MARCH10Q8NA82 808 aaPredicted RBP18.27■□□□□ 0.52
UBE3C-207ENST00000494532 MIS18AQ9NYP9 233 aa18.27■□□□□ 0.52
UBE3C-207ENST00000494532 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
UBE3C-207ENST00000494532 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
UBE3C-207ENST00000494532 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
UBE3C-207ENST00000494532 EXOSC9Q06265 439 aaKnown RBP18.25■□□□□ 0.51
UBE3C-207ENST00000494532 ITGB4P16144 1822 aa18.24■□□□□ 0.51
UBE3C-207ENST00000494532 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
UBE3C-207ENST00000494532 RGS17Q9UGC6 210 aaPredicted RBP18.24■□□□□ 0.51
UBE3C-207ENST00000494532 RXRBP28702 533 aa18.23■□□□□ 0.51
UBE3C-207ENST00000494532 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
UBE3C-207ENST00000494532 BRWD3Q6RI45 1802 aa18.22■□□□□ 0.51
UBE3C-207ENST00000494532 KAT6BQ8WYB5 2073 aa18.21■□□□□ 0.51
UBE3C-207ENST00000494532 RCAN3Q9UKA8 241 aa18.21■□□□□ 0.51
UBE3C-207ENST00000494532 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
UBE3C-207ENST00000494532 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
UBE3C-207ENST00000494532 POTEAQ6S8J7 498 aa18.2■□□□□ 0.5
UBE3C-207ENST00000494532 KCNQ3O43525 872 aa18.19■□□□□ 0.5
UBE3C-207ENST00000494532 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
UBE3C-207ENST00000494532 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
UBE3C-207ENST00000494532 SYTL4Q96C24 671 aaPredicted RBP18.19■□□□□ 0.5
UBE3C-207ENST00000494532 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
UBE3C-207ENST00000494532 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
UBE3C-207ENST00000494532 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
UBE3C-207ENST00000494532 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
UBE3C-207ENST00000494532 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
UBE3C-207ENST00000494532 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
UBE3C-207ENST00000494532 ZNF790Q6PG37 636 aa18.18■□□□□ 0.5
UBE3C-207ENST00000494532 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
UBE3C-207ENST00000494532 TSPYL6Q8N831 410 aa18.18■□□□□ 0.5
UBE3C-207ENST00000494532 BCL9O00512 1426 aa18.17■□□□□ 0.5
UBE3C-207ENST00000494532 KRT27Q7Z3Y8 459 aa18.17■□□□□ 0.5
UBE3C-207ENST00000494532 PIGBQ92521 554 aa18.17■□□□□ 0.5
UBE3C-207ENST00000494532 RGS12O14924 1447 aa18.16■□□□□ 0.5
UBE3C-207ENST00000494532 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
UBE3C-207ENST00000494532 UBR2Q8IWV8 1755 aa18.16■□□□□ 0.5
UBE3C-207ENST00000494532 NHSQ6T4R5 1651 aa18.15■□□□□ 0.5
UBE3C-207ENST00000494532 VAMP4O75379 141 aa18.15■□□□□ 0.5
UBE3C-207ENST00000494532 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
UBE3C-207ENST00000494532 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
UBE3C-207ENST00000494532 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
UBE3C-207ENST00000494532 SBF2Q86WG5 1849 aa18.14■□□□□ 0.49
UBE3C-207ENST00000494532 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
UBE3C-207ENST00000494532 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
UBE3C-207ENST00000494532 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
UBE3C-207ENST00000494532 ASAP1Q9ULH1 1129 aa18.13■□□□□ 0.49
UBE3C-207ENST00000494532 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
UBE3C-207ENST00000494532 KCNQ2O43526 872 aa18.12■□□□□ 0.49
UBE3C-207ENST00000494532 HOXB7P09629 217 aa18.12■□□□□ 0.49
UBE3C-207ENST00000494532 ATG3Q9NT62 314 aa18.12■□□□□ 0.49
UBE3C-207ENST00000494532 HEG1Q9ULI3 1381 aa18.12■□□□□ 0.49
UBE3C-207ENST00000494532 C5P01031 1676 aa18.12■□□□□ 0.49
UBE3C-207ENST00000494532 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
UBE3C-207ENST00000494532 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
UBE3C-207ENST00000494532 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
UBE3C-207ENST00000494532 BTAF1O14981 1849 aa18.1■□□□□ 0.49
UBE3C-207ENST00000494532 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
UBE3C-207ENST00000494532 BCAR3O75815 825 aa18.1■□□□□ 0.49
UBE3C-207ENST00000494532 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
UBE3C-207ENST00000494532 BCL2L13Q9BXK5 485 aa18.1■□□□□ 0.49
UBE3C-207ENST00000494532 LAMB4A4D0S4 1761 aa18.09■□□□□ 0.49
UBE3C-207ENST00000494532 PTCD1O75127 700 aaKnown RBP18.09■□□□□ 0.49
UBE3C-207ENST00000494532 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
UBE3C-207ENST00000494532 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
UBE3C-207ENST00000494532 CHMP4AQ9BY43 222 aa18.09■□□□□ 0.49
UBE3C-207ENST00000494532 TCERG1O14776 1098 aaKnown RBP18.08■□□□□ 0.48
UBE3C-207ENST00000494532 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
UBE3C-207ENST00000494532 CCDC30Q5VVM6 783 aa18.08■□□□□ 0.48
UBE3C-207ENST00000494532 SMARCC1Q92922 1105 aaPredicted RBP18.08■□□□□ 0.48
UBE3C-207ENST00000494532 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
UBE3C-207ENST00000494532 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
UBE3C-207ENST00000494532 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
UBE3C-207ENST00000494532 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
UBE3C-207ENST00000494532 STK31Q9BXU1 1019 aa18.07■□□□□ 0.48
UBE3C-207ENST00000494532 RNF123Q5XPI4 1314 aa18.06■□□□□ 0.48
UBE3C-207ENST00000494532 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
UBE3C-207ENST00000494532 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
UBE3C-207ENST00000494532 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.06■□□□□ 0.48
UBE3C-207ENST00000494532 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
UBE3C-207ENST00000494532 CACNA1FO60840 1977 aa18.05■□□□□ 0.48
UBE3C-207ENST00000494532 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
UBE3C-207ENST00000494532 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
UBE3C-207ENST00000494532 BCL11BQ9C0K0 894 aaPredicted RBP18.05■□□□□ 0.48
UBE3C-207ENST00000494532 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
UBE3C-207ENST00000494532 FRAT1Q92837 279 aaPredicted RBP18.04■□□□□ 0.48
UBE3C-207ENST00000494532 TJP1Q07157 1748 aa18.03■□□□□ 0.48
UBE3C-207ENST00000494532 PLIN1O60240 522 aa18.03■□□□□ 0.48
UBE3C-207ENST00000494532 NEFLP07196 543 aa18.03■□□□□ 0.48
UBE3C-207ENST00000494532 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
UBE3C-207ENST00000494532 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
UBE3C-207ENST00000494532 TRIM37O94972 964 aa18.02■□□□□ 0.48
UBE3C-207ENST00000494532 SLC4A2P04920 1241 aa18.02■□□□□ 0.48
UBE3C-207ENST00000494532 DNAJC10Q8IXB1 793 aa18.02■□□□□ 0.48
UBE3C-207ENST00000494532 TEX13AQ9BXU3 409 aaPredicted RBP18.02■□□□□ 0.48
UBE3C-207ENST00000494532 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.48
UBE3C-207ENST00000494532 CICQ96RK0 1608 aaPredicted RBP18.01■□□□□ 0.47
UBE3C-207ENST00000494532 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms