RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 TRAPPC3LQ5T215 181 aa15.87■□□□□ 0.13
TRIM59-206ENST00000494486 DPY19L2Q6NUT2 758 aa15.87■□□□□ 0.13
TRIM59-206ENST00000494486 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
TRIM59-206ENST00000494486 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
TRIM59-206ENST00000494486 LOC102724428A0A0B4J2F2 783 aa15.86■□□□□ 0.13
TRIM59-206ENST00000494486 SIK1P57059 783 aa15.86■□□□□ 0.13
TRIM59-206ENST00000494486 MEGF6O75095 1541 aa15.85■□□□□ 0.13
TRIM59-206ENST00000494486 NME9Q86XW9 330 aa15.85■□□□□ 0.13
TRIM59-206ENST00000494486 CFAP44Q96MT7 982 aa15.84■□□□□ 0.13
TRIM59-206ENST00000494486 BRCA1P38398 1863 aaKnown RBP15.83■□□□□ 0.12
TRIM59-206ENST00000494486 TMEM88BA6NKF7 163 aa15.83■□□□□ 0.12
TRIM59-206ENST00000494486 RASSF7Q02833 373 aa15.83■□□□□ 0.12
TRIM59-206ENST00000494486 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.12
TRIM59-206ENST00000494486 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
TRIM59-206ENST00000494486 FAM208AQ9UK61 1670 aaKnown RBP15.83■□□□□ 0.12
TRIM59-206ENST00000494486 GYS1P13807 737 aa15.82■□□□□ 0.12
TRIM59-206ENST00000494486 PIGBQ92521 554 aa15.82■□□□□ 0.12
TRIM59-206ENST00000494486 PASKQ96RG2 1323 aa15.82■□□□□ 0.12
TRIM59-206ENST00000494486 PCDH11XQ9BZA7 1347 aa15.82■□□□□ 0.12
TRIM59-206ENST00000494486 PCDH11YQ9BZA8 1340 aa15.82■□□□□ 0.12
TRIM59-206ENST00000494486 LTN1O94822 1766 aa15.82■□□□□ 0.12
TRIM59-206ENST00000494486 ADRA2BP18089 450 aa15.81■□□□□ 0.12
TRIM59-206ENST00000494486 TATP17735 454 aaPredicted RBP15.8■□□□□ 0.12
TRIM59-206ENST00000494486 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
TRIM59-206ENST00000494486 ITPK1Q13572 414 aa15.8■□□□□ 0.12
TRIM59-206ENST00000494486 ARHGEF1Q92888 912 aaKnown RBP15.8■□□□□ 0.12
TRIM59-206ENST00000494486 SBF1O95248 1867 aa15.8■□□□□ 0.12
TRIM59-206ENST00000494486 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
TRIM59-206ENST00000494486 CHRNA5P30532 468 aa15.79■□□□□ 0.12
TRIM59-206ENST00000494486 DEFB115Q30KQ5 88 aa15.79■□□□□ 0.12
TRIM59-206ENST00000494486 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
TRIM59-206ENST00000494486 HOXC9P31274 260 aa15.78■□□□□ 0.12
TRIM59-206ENST00000494486 RFC4P35249 363 aa15.78■□□□□ 0.12
TRIM59-206ENST00000494486 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
TRIM59-206ENST00000494486 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
TRIM59-206ENST00000494486 SBNO2Q9Y2G9 1366 aa15.77■□□□□ 0.12
TRIM59-206ENST00000494486 AMPHP49418 695 aa15.77■□□□□ 0.12
TRIM59-206ENST00000494486 NBPF6Q5VWK0 638 aa15.77■□□□□ 0.12
TRIM59-206ENST00000494486 NBPF4Q96M43 638 aa15.77■□□□□ 0.12
TRIM59-206ENST00000494486 BEGAINQ9BUH8 593 aa15.77■□□□□ 0.12
TRIM59-206ENST00000494486 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
TRIM59-206ENST00000494486 CYP27B1O15528 508 aa15.76■□□□□ 0.11
TRIM59-206ENST00000494486 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
TRIM59-206ENST00000494486 POTEJP0CG39 1038 aa15.76■□□□□ 0.11
TRIM59-206ENST00000494486 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
TRIM59-206ENST00000494486 LDHDQ86WU2 507 aa15.75■□□□□ 0.11
TRIM59-206ENST00000494486 MCOLN1Q9GZU1 580 aa15.75■□□□□ 0.11
TRIM59-206ENST00000494486 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
TRIM59-206ENST00000494486 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
TRIM59-206ENST00000494486 RPS6KA4O75676 772 aa15.73■□□□□ 0.11
TRIM59-206ENST00000494486 ITGBL1O95965 494 aaPredicted RBP15.73■□□□□ 0.11
TRIM59-206ENST00000494486 NKX1-1Q15270 411 aaPredicted RBP15.73■□□□□ 0.11
TRIM59-206ENST00000494486 HDGFL2Q7Z4V5 671 aaPredicted RBP15.73■□□□□ 0.11
TRIM59-206ENST00000494486 ASAP1Q9ULH1 1129 aa15.73■□□□□ 0.11
TRIM59-206ENST00000494486 USHBP1Q8N6Y0 703 aa15.72■□□□□ 0.11
TRIM59-206ENST00000494486 TMOD3Q9NYL9 352 aa15.72■□□□□ 0.11
TRIM59-206ENST00000494486 MAP2P11137 1827 aaKnown RBP15.72■□□□□ 0.11
TRIM59-206ENST00000494486 IQCA1LA6NCM1 817 aa15.71■□□□□ 0.11
TRIM59-206ENST00000494486 NFKBIEO00221 500 aa15.71■□□□□ 0.11
TRIM59-206ENST00000494486 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
TRIM59-206ENST00000494486 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.1
TRIM59-206ENST00000494486 DDR1Q08345 913 aa15.7■□□□□ 0.1
TRIM59-206ENST00000494486 TTLL6Q8N841 843 aa15.7■□□□□ 0.1
TRIM59-206ENST00000494486 EDC4Q6P2E9 1401 aaKnown RBP15.69■□□□□ 0.1
TRIM59-206ENST00000494486 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
TRIM59-206ENST00000494486 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
TRIM59-206ENST00000494486 DDNO94850 711 aaPredicted RBP15.68■□□□□ 0.1
TRIM59-206ENST00000494486 FKBP8Q14318 412 aa15.68■□□□□ 0.1
TRIM59-206ENST00000494486 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
TRIM59-206ENST00000494486 PDE4DIPQ5VU43 2346 aa15.68■□□□□ 0.1
TRIM59-206ENST00000494486 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
TRIM59-206ENST00000494486 ECE1P42892 770 aa15.67■□□□□ 0.1
TRIM59-206ENST00000494486 TAF1DQ9H5J8 278 aaPredicted RBP15.67■□□□□ 0.1
TRIM59-206ENST00000494486 ABT1Q9ULW3 272 aaKnown RBP15.67■□□□□ 0.1
TRIM59-206ENST00000494486 RTL1A6NKG5 1358 aa15.66■□□□□ 0.1
TRIM59-206ENST00000494486 TM4SF1P30408 202 aa15.66■□□□□ 0.1
TRIM59-206ENST00000494486 DGKZQ13574 1117 aa15.66■□□□□ 0.1
TRIM59-206ENST00000494486 GCC1Q96CN9 775 aa15.66■□□□□ 0.1
TRIM59-206ENST00000494486 COG3Q96JB2 828 aa15.66■□□□□ 0.1
TRIM59-206ENST00000494486 TIAM2Q8IVF5 1701 aa15.65■□□□□ 0.1
TRIM59-206ENST00000494486 CA12O43570 354 aa15.65■□□□□ 0.1
TRIM59-206ENST00000494486 TMC1Q8TDI8 760 aa15.65■□□□□ 0.1
TRIM59-206ENST00000494486 GPR101Q96P66 508 aaPredicted RBP15.65■□□□□ 0.1
TRIM59-206ENST00000494486 TERF2IPQ9NYB0 399 aa15.65■□□□□ 0.1
TRIM59-206ENST00000494486 ITGB4P16144 1822 aa15.65■□□□□ 0.1
TRIM59-206ENST00000494486 FBLN1P23142 703 aa15.64■□□□□ 0.09
TRIM59-206ENST00000494486 L3MBTL3Q96JM7 780 aaPredicted RBP15.64■□□□□ 0.09
TRIM59-206ENST00000494486 CAPNS2Q96L46 248 aa15.64■□□□□ 0.09
TRIM59-206ENST00000494486 SRP68Q9UHB9 627 aaKnown RBP15.64■□□□□ 0.09
TRIM59-206ENST00000494486 SPG7Q9UQ90 795 aa15.64■□□□□ 0.09
TRIM59-206ENST00000494486 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
TRIM59-206ENST00000494486 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
TRIM59-206ENST00000494486 KDRP35968 1356 aa15.63■□□□□ 0.09
TRIM59-206ENST00000494486 RGPD2P0DJD1 1756 aa15.63■□□□□ 0.09
TRIM59-206ENST00000494486 SLC4A9Q96Q91 983 aa15.63■□□□□ 0.09
TRIM59-206ENST00000494486 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
TRIM59-206ENST00000494486 TSKSQ9UJT2 592 aa15.63■□□□□ 0.09
TRIM59-206ENST00000494486 MAP2K2P36507 400 aa15.62■□□□□ 0.09
TRIM59-206ENST00000494486 EAPPQ56P03 285 aaPredicted RBP15.62■□□□□ 0.09
TRIM59-206ENST00000494486 CNTROBQ8N137 903 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms