RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 GIPC2Q8TF65 315 aa6.76□□□□□ -1.33
CMSS1-207ENST00000494412 ITPKCQ96DU7 683 aa6.76□□□□□ -1.33
CMSS1-207ENST00000494412 SIRT1Q96EB6 747 aa6.76□□□□□ -1.33
CMSS1-207ENST00000494412 HINFPQ9BQA5 517 aa6.76□□□□□ -1.33
CMSS1-207ENST00000494412 KLF16Q9BXK1 252 aaPredicted RBP6.76□□□□□ -1.33
CMSS1-207ENST00000494412 TUT1Q9H6E5 874 aaKnown RBP6.76□□□□□ -1.33
CMSS1-207ENST00000494412 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
CMSS1-207ENST00000494412 PCDHB11Q9Y5F2 797 aa6.76□□□□□ -1.33
CMSS1-207ENST00000494412 ANKRD33BA6NCL7 494 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 AXIN1O15169 862 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 TIMP2P16035 220 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 OCLNQ16625 522 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 NBPF20Q3BBV1 942 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 TAS1R3Q7RTX0 852 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 GLYCTKQ8IVS8 523 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 MKNK1Q9BUB5 465 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 TMPRSS4Q9NRS4 437 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 KIAA1522Q9P206 1035 aaPredicted RBP6.75□□□□□ -1.33
CMSS1-207ENST00000494412 CDV3Q9UKY7 258 aaKnown RBP6.75□□□□□ -1.33
CMSS1-207ENST00000494412 PCDHGA11Q9Y5H2 935 aa6.75□□□□□ -1.33
CMSS1-207ENST00000494412 ESPNB1AK53 854 aa6.74□□□□□ -1.33
CMSS1-207ENST00000494412 CAPN5O15484 640 aaPredicted RBP6.74□□□□□ -1.33
CMSS1-207ENST00000494412 ZIC2O95409 532 aaPredicted RBP6.74□□□□□ -1.33
CMSS1-207ENST00000494412 PPP1R26Q5T8A7 1209 aaPredicted RBP6.74□□□□□ -1.33
CMSS1-207ENST00000494412 EGFL7Q9UHF1 273 aa6.74□□□□□ -1.33
CMSS1-207ENST00000494412 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
CMSS1-207ENST00000494412 ICMTO60725 284 aa6.73□□□□□ -1.33
CMSS1-207ENST00000494412 SMCPP49901 116 aaPredicted RBP6.73□□□□□ -1.33
CMSS1-207ENST00000494412 USP4Q13107 963 aa6.73□□□□□ -1.33
CMSS1-207ENST00000494412 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
CMSS1-207ENST00000494412 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
CMSS1-207ENST00000494412 USP35Q9P2H5 1018 aa6.73□□□□□ -1.33
CMSS1-207ENST00000494412 BMP1P13497 986 aa6.72□□□□□ -1.33
CMSS1-207ENST00000494412 MAPK1P28482 360 aa6.72□□□□□ -1.33
CMSS1-207ENST00000494412 CBLBQ13191 982 aa6.72□□□□□ -1.33
CMSS1-207ENST00000494412 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
CMSS1-207ENST00000494412 TSEN2Q8NCE0 465 aaKnown RBP6.72□□□□□ -1.33
CMSS1-207ENST00000494412 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
CMSS1-207ENST00000494412 SEPT3Q9UH03 358 aa6.72□□□□□ -1.33
CMSS1-207ENST00000494412 POTECB2RU33 542 aa6.71□□□□□ -1.34
CMSS1-207ENST00000494412 ZNF326Q5BKZ1 582 aaKnown RBP6.71□□□□□ -1.34
CMSS1-207ENST00000494412 ZNF784Q8NCA9 323 aaPredicted RBP6.71□□□□□ -1.34
CMSS1-207ENST00000494412 IGSF5Q9NSI5 407 aa6.71□□□□□ -1.34
CMSS1-207ENST00000494412 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
CMSS1-207ENST00000494412 SHROOM4Q9ULL8 1493 aa6.71□□□□□ -1.34
CMSS1-207ENST00000494412 C21orf2O43822 256 aa6.7□□□□□ -1.34
CMSS1-207ENST00000494412 MYCP01106 439 aaPredicted RBP6.7□□□□□ -1.34
CMSS1-207ENST00000494412 MTMR3Q13615 1198 aa6.7□□□□□ -1.34
CMSS1-207ENST00000494412 TRIM46Q7Z4K8 759 aa6.7□□□□□ -1.34
CMSS1-207ENST00000494412 CYLDQ9NQC7 956 aa6.7□□□□□ -1.34
CMSS1-207ENST00000494412 DNMT3AQ9Y6K1 912 aaPredicted RBP6.7□□□□□ -1.34
CMSS1-207ENST00000494412 LILRA1O75019 489 aa6.69□□□□□ -1.34
CMSS1-207ENST00000494412 ADD1P35611 737 aaKnown RBP6.69□□□□□ -1.34
CMSS1-207ENST00000494412 FKBP4Q02790 459 aaKnown RBP eCLIP6.69□□□□□ -1.34
CMSS1-207ENST00000494412 DHX9Q08211 1270 aaKnown RBP6.69□□□□□ -1.34
CMSS1-207ENST00000494412 FKBP5Q13451 457 aaPredicted RBP6.69□□□□□ -1.34
CMSS1-207ENST00000494412 CAPN12Q6ZSI9 719 aa6.69□□□□□ -1.34
CMSS1-207ENST00000494412 SEPT12Q8IYM1 358 aa6.69□□□□□ -1.34
CMSS1-207ENST00000494412 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
CMSS1-207ENST00000494412 ATP13A2Q9NQ11 1180 aa6.69□□□□□ -1.34
CMSS1-207ENST00000494412 PGPEP1Q9NXJ5 209 aa6.69□□□□□ -1.34
CMSS1-207ENST00000494412 WEE1P30291 646 aa6.68□□□□□ -1.34
CMSS1-207ENST00000494412 SCTRP47872 440 aa6.68□□□□□ -1.34
CMSS1-207ENST00000494412 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
CMSS1-207ENST00000494412 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
CMSS1-207ENST00000494412 GAS2L2Q8NHY3 880 aa6.68□□□□□ -1.34
CMSS1-207ENST00000494412 AGBL1Q96MI9 1066 aa6.68□□□□□ -1.34
CMSS1-207ENST00000494412 PURBQ96QR8 312 aaKnown RBP6.68□□□□□ -1.34
CMSS1-207ENST00000494412 GMPR2Q9P2T1 348 aaKnown RBP6.68□□□□□ -1.34
CMSS1-207ENST00000494412 DCTN4Q9UJW0 460 aa6.68□□□□□ -1.34
CMSS1-207ENST00000494412 M0R2N6 131 aa6.67□□□□□ -1.34
CMSS1-207ENST00000494412 PTCD1O75127 700 aaKnown RBP6.67□□□□□ -1.34
CMSS1-207ENST00000494412 TCF3P15923 654 aa6.67□□□□□ -1.34
CMSS1-207ENST00000494412 NAA30Q147X3 362 aaPredicted RBP6.67□□□□□ -1.34
CMSS1-207ENST00000494412 C6orf118Q5T5N4 469 aa6.67□□□□□ -1.34
CMSS1-207ENST00000494412 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
CMSS1-207ENST00000494412 MEIOBQ8N635 442 aa6.67□□□□□ -1.34
CMSS1-207ENST00000494412 ASB16Q96NS5 453 aa6.67□□□□□ -1.34
CMSS1-207ENST00000494412 ESF1Q9H501 851 aaKnown RBP6.67□□□□□ -1.34
CMSS1-207ENST00000494412 ZNF358Q9NW07 568 aa6.67□□□□□ -1.34
CMSS1-207ENST00000494412 TAGLNQ01995 201 aaKnown RBP6.66□□□□□ -1.34
CMSS1-207ENST00000494412 MRPL14Q6P1L8 145 aaKnown RBP6.66□□□□□ -1.34
CMSS1-207ENST00000494412 Q6ZVU0 165 aa6.66□□□□□ -1.34
CMSS1-207ENST00000494412 ZFP42Q96MM3 310 aa6.66□□□□□ -1.34
CMSS1-207ENST00000494412 ARHGAP4P98171 946 aa6.65□□□□□ -1.34
CMSS1-207ENST00000494412 ECM1Q16610 540 aa6.65□□□□□ -1.34
CMSS1-207ENST00000494412 FBXO33Q7Z6M2 555 aa6.65□□□□□ -1.34
CMSS1-207ENST00000494412 LINC00528Q8N1L1 170 aa6.65□□□□□ -1.34
CMSS1-207ENST00000494412 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
CMSS1-207ENST00000494412 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 IGFBP4P22692 258 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 ERVK-9P63128 1117 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 RELBQ01201 579 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 CC2D2BQ6DHV5 1058 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 SCG3Q8WXD2 468 aaKnown RBP6.64□□□□□ -1.35
CMSS1-207ENST00000494412 VTI1AQ96AJ9 217 aa6.64□□□□□ -1.35
CMSS1-207ENST00000494412 ZNF395Q9H8N7 513 aaPredicted RBP6.64□□□□□ -1.35
CMSS1-207ENST00000494412 FOXO3O43524 673 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms