RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 USP17L12C9JPN9 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L21D6R901 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 RNF144AP50876 292 aaPredicted RBP11.25□□□□□ -0.61
MSL3-217ENST00000494268 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 ZNF358Q9NW07 568 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 DNMT3LQ9UJW3 386 aa11.25□□□□□ -0.61
MSL3-217ENST00000494268 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
MSL3-217ENST00000494268 SFI1A8K8P3 1242 aa11.24□□□□□ -0.61
MSL3-217ENST00000494268 DPYDQ12882 1025 aa11.24□□□□□ -0.61
MSL3-217ENST00000494268 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
MSL3-217ENST00000494268 WASLO00401 505 aaPredicted RBP11.23□□□□□ -0.61
MSL3-217ENST00000494268 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
MSL3-217ENST00000494268 SIX5Q8N196 739 aa11.23□□□□□ -0.61
MSL3-217ENST00000494268 GRIP2Q9C0E4 1043 aa11.23□□□□□ -0.61
MSL3-217ENST00000494268 MAN1A2O60476 641 aa11.22□□□□□ -0.61
MSL3-217ENST00000494268 PRICKLE2Q7Z3G6 844 aa11.22□□□□□ -0.61
MSL3-217ENST00000494268 ARXQ96QS3 562 aa11.22□□□□□ -0.61
MSL3-217ENST00000494268 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
MSL3-217ENST00000494268 SMTNP53814 917 aa11.21□□□□□ -0.61
MSL3-217ENST00000494268 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.61
MSL3-217ENST00000494268 ANKMY2Q8IV38 441 aa11.21□□□□□ -0.61
MSL3-217ENST00000494268 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.61
MSL3-217ENST00000494268 ATG7O95352 703 aa11.2□□□□□ -0.62
MSL3-217ENST00000494268 GPC1P35052 558 aa11.2□□□□□ -0.62
MSL3-217ENST00000494268 TLR1Q15399 786 aa11.2□□□□□ -0.62
MSL3-217ENST00000494268 TNS4Q8IZW8 715 aa11.2□□□□□ -0.62
MSL3-217ENST00000494268 NOVA2Q9UNW9 492 aaKnown RBP11.2□□□□□ -0.62
MSL3-217ENST00000494268 BACH1O14867 736 aa11.19□□□□□ -0.62
MSL3-217ENST00000494268 LGR5O75473 907 aa11.19□□□□□ -0.62
MSL3-217ENST00000494268 SEC13P55735 322 aa11.19□□□□□ -0.62
MSL3-217ENST00000494268 TSEN2Q8NCE0 465 aaKnown RBP11.19□□□□□ -0.62
MSL3-217ENST00000494268 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
MSL3-217ENST00000494268 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
MSL3-217ENST00000494268 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
MSL3-217ENST00000494268 A6NJY4 79 aa11.18□□□□□ -0.62
MSL3-217ENST00000494268 POU4F2Q12837 409 aa11.18□□□□□ -0.62
MSL3-217ENST00000494268 LYSMD3Q7Z3D4 306 aa11.18□□□□□ -0.62
MSL3-217ENST00000494268 FAM200AQ8TCP9 573 aa11.18□□□□□ -0.62
MSL3-217ENST00000494268 PPP1R15AO75807 674 aaPredicted RBP11.17□□□□□ -0.62
MSL3-217ENST00000494268 RHOQP17081 205 aa11.17□□□□□ -0.62
MSL3-217ENST00000494268 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.17□□□□□ -0.622e-6■■□□□ 13.3
MSL3-217ENST00000494268 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
MSL3-217ENST00000494268 EPHA4P54764 986 aa11.16□□□□□ -0.62
MSL3-217ENST00000494268 TBCELQ5QJ74 424 aa11.16□□□□□ -0.62
MSL3-217ENST00000494268 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
MSL3-217ENST00000494268 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
MSL3-217ENST00000494268 MTFR1Q15390 333 aa11.15□□□□□ -0.62
MSL3-217ENST00000494268 TMEM214Q6NUQ4 689 aaKnown RBP11.15□□□□□ -0.62
MSL3-217ENST00000494268 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
MSL3-217ENST00000494268 HINFPQ9BQA5 517 aa11.15□□□□□ -0.62
MSL3-217ENST00000494268 ACIN1Q9UKV3 1341 aaKnown RBP11.14□□□□□ -0.63
MSL3-217ENST00000494268 M0R2N6 131 aa11.14□□□□□ -0.63
MSL3-217ENST00000494268 CDK2AP1O14519 115 aa11.14□□□□□ -0.63
MSL3-217ENST00000494268 PHKA2P46019 1235 aa11.14□□□□□ -0.63
MSL3-217ENST00000494268 SCHIP1Q9P0W5 487 aaPredicted RBP11.14□□□□□ -0.63
MSL3-217ENST00000494268 IQSEC3Q9UPP2 1182 aaPredicted RBP11.14□□□□□ -0.63
MSL3-217ENST00000494268 SPATA31C2B4DYI2 1134 aa11.13□□□□□ -0.63
MSL3-217ENST00000494268 NBPF10Q6P3W6 841 aaKnown RBP11.13□□□□□ -0.63
MSL3-217ENST00000494268 NBPF15Q8N660 670 aa11.13□□□□□ -0.63
MSL3-217ENST00000494268 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
MSL3-217ENST00000494268 FOXK2Q01167 660 aa11.12□□□□□ -0.63
MSL3-217ENST00000494268 PTSQ03393 145 aa11.12□□□□□ -0.63
MSL3-217ENST00000494268 C4orf17Q53FE4 359 aa11.12□□□□□ -0.63
MSL3-217ENST00000494268 TMEM164Q5U3C3 297 aa11.12□□□□□ -0.63
MSL3-217ENST00000494268 TSPAN10Q9H1Z9 355 aaPredicted RBP11.12□□□□□ -0.63
MSL3-217ENST00000494268 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
MSL3-217ENST00000494268 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
MSL3-217ENST00000494268 TAS1R3Q7RTX0 852 aa11.11□□□□□ -0.63
MSL3-217ENST00000494268 SLC9A9Q8IVB4 645 aa11.11□□□□□ -0.63
MSL3-217ENST00000494268 SENP3-EIF4A1A0A087X0R7 540 aa11.1□□□□□ -0.63
MSL3-217ENST00000494268 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
MSL3-217ENST00000494268 GNASQ5JWF2 1037 aa11.1□□□□□ -0.63
MSL3-217ENST00000494268 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
MSL3-217ENST00000494268 RHBDD1Q8TEB9 315 aa11.1□□□□□ -0.63
MSL3-217ENST00000494268 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
MSL3-217ENST00000494268 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
MSL3-217ENST00000494268 SLC35F4A4IF30 521 aa11.08□□□□□ -0.64
MSL3-217ENST00000494268 C21orf2O43822 256 aa11.08□□□□□ -0.64
MSL3-217ENST00000494268 SCG3Q8WXD2 468 aaKnown RBP11.08□□□□□ -0.64
MSL3-217ENST00000494268 NIFKQ9BYG3 293 aaKnown RBP11.08□□□□□ -0.64
MSL3-217ENST00000494268 ATAD2Q6PL18 1390 aa11.07□□□□□ -0.64
MSL3-217ENST00000494268 PLA2G4AP47712 749 aa11.07□□□□□ -0.64
MSL3-217ENST00000494268 WDR44Q5JSH3 913 aa11.07□□□□□ -0.64
MSL3-217ENST00000494268 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
MSL3-217ENST00000494268 ZDHHC1Q8WTX9 485 aa11.07□□□□□ -0.64
MSL3-217ENST00000494268 TIMMDC1Q9NPL8 285 aa11.07□□□□□ -0.64
MSL3-217ENST00000494268 VEGFBP49765 207 aa11.06□□□□□ -0.64
MSL3-217ENST00000494268 PRIMPOLQ96LW4 560 aa11.06□□□□□ -0.64
MSL3-217ENST00000494268 SLAIN2Q9P270 581 aa11.06□□□□□ -0.64
MSL3-217ENST00000494268 TMEM88BA6NKF7 163 aa11.05□□□□□ -0.64
MSL3-217ENST00000494268 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
MSL3-217ENST00000494268 CHMP7Q8WUX9 453 aaPredicted RBP11.05□□□□□ -0.64
MSL3-217ENST00000494268 AIDAQ96BJ3 306 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms