RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 RARSP54136 660 aaKnown RBP8.55□□□□□ -1.04
FNDC3B-212ENST00000494000 RNF216Q9NWF9 866 aaPredicted RBP8.55□□□□□ -1.04
FNDC3B-212ENST00000494000 KIAA0232Q92628 1395 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 MAP3K5Q99683 1374 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 ERBB3P21860 1342 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 OS9Q13438 667 aaPredicted RBP8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.54□□□□□ -1.043e-15■■■□□ 16
FNDC3B-212ENST00000494000 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 LRRC37A3O60309 1634 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 COL22A1Q8NFW1 1626 aaPredicted RBP8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 KIF16BQ96L93 1317 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 IPO8O15397 1037 aaKnown RBP8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 TOM1O60784 492 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 IRF5Q13568 498 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 MTHFSDQ2M296 383 aaKnown RBP8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 ROBO1Q9Y6N7 1651 aa8.54□□□□□ -1.04
FNDC3B-212ENST00000494000 LTV1Q96GA3 475 aaPredicted RBP8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 CHL1O00533 1208 aa8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 CANXP27824 592 aaKnown RBP8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 AKAP4Q5JQC9 854 aa8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 NBPF6Q5VWK0 638 aa8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 NBPF4Q96M43 638 aa8.53□□□□□ -1.04
FNDC3B-212ENST00000494000 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.04
FNDC3B-212ENST00000494000 IL27Q8NEV9 243 aa8.52□□□□□ -1.04
FNDC3B-212ENST00000494000 CRB1P82279 1406 aa8.52□□□□□ -1.05
FNDC3B-212ENST00000494000 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
FNDC3B-212ENST00000494000 ZC3H6P61129 1189 aaKnown RBP8.52□□□□□ -1.05
FNDC3B-212ENST00000494000 RGPD5Q99666 1765 aa8.52□□□□□ -1.05
FNDC3B-212ENST00000494000 ANAPC15P60006 121 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 C1orf141Q5JVX7 400 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 ARHGAP45Q92619 1136 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 SPG7Q9UQ90 795 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 TATP17735 454 aaPredicted RBP8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 ZKSCAN2Q63HK3 967 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 TSR2Q969E8 191 aaKnown RBP8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 PRDM11Q9NQV5 511 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 MBIPQ9NS73 344 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 RGPD2P0DJD1 1756 aa8.51□□□□□ -1.05
FNDC3B-212ENST00000494000 HSP90AB1P08238 724 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 LAS1LQ9Y4W2 734 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 CEMIPQ8WUJ3 1361 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 COL14A1Q05707 1796 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 PARP4Q9UKK3 1724 aaKnown RBP8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 TAF7Q15545 349 aaPredicted RBP8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 SMC4Q9NTJ3 1288 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 AXIN2Q9Y2T1 843 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 VAMP4O75379 141 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 BCAR3O75815 825 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 TWISTNBQ3B726 338 aaPredicted RBP8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 CLUAP1Q96AJ1 413 aa8.5□□□□□ -1.05
FNDC3B-212ENST00000494000 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 ADAMTS7Q9UKP4 1686 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 UNCXA6NJT0 531 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 NLRP2Q9NX02 1062 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 LOC102724159A0A0B4J2E5 919 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 HOXB7P09629 217 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 PWP2Q15269 919 aaKnown RBP8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 TSPYL4Q9UJ04 414 aa8.49□□□□□ -1.05
FNDC3B-212ENST00000494000 COL5A2P05997 1499 aaPredicted RBP8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 FAM83GA6ND36 823 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 MCM10Q7L590 875 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 CRBNQ96SW2 442 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 CARD10Q9BWT7 1032 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 PLIN1O60240 522 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 ATF7IPQ6VMQ6 1270 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 DZIP1LQ8IYY4 767 aaKnown RBP8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 USHBP1Q8N6Y0 703 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 SSH1Q8WYL5 1049 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 THUMPD2Q9BTF0 503 aaKnown RBP8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 API5Q9BZZ5 524 aaKnown RBP8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 COL16A1Q07092 1604 aaPredicted RBP8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 CACNA1FO60840 1977 aa8.48□□□□□ -1.05
FNDC3B-212ENST00000494000 TEFQ10587 303 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 DCTN1Q14203 1278 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 IFNL2Q8IZJ0 200 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 EVA1CP58658 441 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 IL17REQ8NFR9 667 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 EVI5LQ96CN4 794 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 DDX19BQ9UMR2 479 aa8.47□□□□□ -1.05
FNDC3B-212ENST00000494000 PTPRCP08575 1304 aa8.46□□□□□ -1.05
FNDC3B-212ENST00000494000 RNMTO43148 476 aaKnown RBP8.46□□□□□ -1.05
FNDC3B-212ENST00000494000 MRPL50Q8N5N7 158 aaKnown RBP8.46□□□□□ -1.05
FNDC3B-212ENST00000494000 RETREG2Q8NC44 543 aa8.46□□□□□ -1.05
FNDC3B-212ENST00000494000 KDM3BQ7LBC6 1761 aa8.46□□□□□ -1.06
FNDC3B-212ENST00000494000 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
FNDC3B-212ENST00000494000 TOM1L2Q6ZVM7 507 aa8.46□□□□□ -1.06
FNDC3B-212ENST00000494000 SCN11AQ9UI33 1791 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 VIRMAQ69YN4 1812 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms