RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 NOM1Q5C9Z4 860 aaKnown RBP10.23□□□□□ -0.77
SMC2-205ENST00000493955 DNMT3AQ9Y6K1 912 aaPredicted RBP10.23□□□□□ -0.77
SMC2-205ENST00000493955 V9GY48 417 aaPredicted RBP10.23□□□□□ -0.77
SMC2-205ENST00000493955 ADH1CP00326 375 aa10.22□□□□□ -0.77
SMC2-205ENST00000493955 CAPN12Q6ZSI9 719 aa10.22□□□□□ -0.77
SMC2-205ENST00000493955 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
SMC2-205ENST00000493955 CCDC116Q8IYX3 515 aa10.22□□□□□ -0.77
SMC2-205ENST00000493955 STAU1O95793 577 aaKnown RBP10.21□□□□□ -0.78
SMC2-205ENST00000493955 INHAP05111 366 aa10.21□□□□□ -0.78
SMC2-205ENST00000493955 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.78
SMC2-205ENST00000493955 TNS4Q8IZW8 715 aa10.21□□□□□ -0.78
SMC2-205ENST00000493955 SCG3Q8WXD2 468 aaKnown RBP10.21□□□□□ -0.78
SMC2-205ENST00000493955 ETNK1Q9HBU6 452 aa10.21□□□□□ -0.78
SMC2-205ENST00000493955 EPHA4P54764 986 aa10.2□□□□□ -0.78
SMC2-205ENST00000493955 MYT1Q01538 1121 aa10.2□□□□□ -0.78
SMC2-205ENST00000493955 NR5A1Q13285 461 aa10.2□□□□□ -0.78
SMC2-205ENST00000493955 ANKRD33BA6NCL7 494 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 UNCXA6NJT0 531 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 SIAH2O43255 324 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 LILRA1O75019 489 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 MTMR3Q13615 1198 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 PPP1R26Q5T8A7 1209 aaPredicted RBP10.19□□□□□ -0.78
SMC2-205ENST00000493955 GAS2L2Q8NHY3 880 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 HELQQ8TDG4 1101 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 BCL2L13Q9BXK5 485 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 SERTAD1Q9UHV2 236 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
SMC2-205ENST00000493955 GNRH1P01148 92 aa10.18□□□□□ -0.78
SMC2-205ENST00000493955 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
SMC2-205ENST00000493955 NPAS4Q8IUM7 802 aa10.18□□□□□ -0.78
SMC2-205ENST00000493955 TSPAN10Q9H1Z9 355 aaPredicted RBP10.18□□□□□ -0.78
SMC2-205ENST00000493955 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
SMC2-205ENST00000493955 MAPK1P28482 360 aa10.17□□□□□ -0.78
SMC2-205ENST00000493955 NAA30Q147X3 362 aaPredicted RBP10.17□□□□□ -0.78
SMC2-205ENST00000493955 ECM1Q16610 540 aa10.17□□□□□ -0.78
SMC2-205ENST00000493955 ESCO1Q5FWF5 840 aa10.17□□□□□ -0.78
SMC2-205ENST00000493955 VTI1AQ96AJ9 217 aa10.17□□□□□ -0.78
SMC2-205ENST00000493955 SLC4A9Q96Q91 983 aa10.17□□□□□ -0.78
SMC2-205ENST00000493955 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
SMC2-205ENST00000493955 WNT7AO00755 349 aa10.16□□□□□ -0.78
SMC2-205ENST00000493955 ARHGAP4P98171 946 aa10.16□□□□□ -0.78
SMC2-205ENST00000493955 ZNF775Q96BV0 537 aaPredicted RBP10.16□□□□□ -0.78
SMC2-205ENST00000493955 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
SMC2-205ENST00000493955 NR3C2P08235 984 aa10.15□□□□□ -0.79
SMC2-205ENST00000493955 ZNF16P17020 682 aaPredicted RBP10.15□□□□□ -0.79
SMC2-205ENST00000493955 GIPC2Q8TF65 315 aa10.15□□□□□ -0.79
SMC2-205ENST00000493955 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.79
SMC2-205ENST00000493955 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.79
SMC2-205ENST00000493955 MRGPRX2Q96LB1 330 aa10.15□□□□□ -0.79
SMC2-205ENST00000493955 ASB16Q96NS5 453 aa10.15□□□□□ -0.79
SMC2-205ENST00000493955 SCHIP1Q9P0W5 487 aaPredicted RBP10.15□□□□□ -0.79
SMC2-205ENST00000493955 EMILIN1Q9Y6C2 1016 aa10.15□□□□□ -0.79
SMC2-205ENST00000493955 PPP1R12BO60237 982 aaPredicted RBP10.14□□□□□ -0.79
SMC2-205ENST00000493955 FOXK2Q01167 660 aa10.14□□□□□ -0.79
SMC2-205ENST00000493955 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.14□□□□□ -0.796e-6■■■■■ 48.1
SMC2-205ENST00000493955 A6NJY4 79 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 FAM13AO94988 1023 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 NPR3P17342 541 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
SMC2-205ENST00000493955 MTFR1Q15390 333 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 SLC9A9Q8IVB4 645 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 ZSCAN29Q8IWY8 852 aaPredicted RBP10.13□□□□□ -0.79
SMC2-205ENST00000493955 STAG2Q8N3U4 1231 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 RAB6BQ9NRW1 208 aa10.13□□□□□ -0.79
SMC2-205ENST00000493955 A0A1W2PRU2 124 aa10.12□□□□□ -0.79
SMC2-205ENST00000493955 SMTNP53814 917 aa10.12□□□□□ -0.79
SMC2-205ENST00000493955 C16orf46Q6P387 395 aa10.12□□□□□ -0.79
SMC2-205ENST00000493955 MRRFQ96E11 262 aaKnown RBP10.12□□□□□ -0.79
SMC2-205ENST00000493955 SLC19A1P41440 591 aa10.11□□□□□ -0.79
SMC2-205ENST00000493955 PSMA6P60900 246 aaKnown RBP10.1□□□□□ -0.79
SMC2-205ENST00000493955 ZNF326Q5BKZ1 582 aaKnown RBP10.1□□□□□ -0.79
SMC2-205ENST00000493955 TBCELQ5QJ74 424 aa10.1□□□□□ -0.79
SMC2-205ENST00000493955 XAGE2Q96GT9 111 aa10.1□□□□□ -0.79
SMC2-205ENST00000493955 C2orf49Q9BVC5 232 aaPredicted RBP10.1□□□□□ -0.79
SMC2-205ENST00000493955 KIAA1522Q9P206 1035 aaPredicted RBP10.1□□□□□ -0.79
SMC2-205ENST00000493955 IL2RAP01589 272 aa10.09□□□□□ -0.79
SMC2-205ENST00000493955 MPSTP25325 297 aa10.09□□□□□ -0.79
SMC2-205ENST00000493955 RGL4Q8IZJ4 473 aa10.09□□□□□ -0.79
SMC2-205ENST00000493955 SAP130Q9H0E3 1048 aa10.09□□□□□ -0.79
SMC2-205ENST00000493955 CHMP3Q9Y3E7 222 aa10.09□□□□□ -0.79
SMC2-205ENST00000493955 ADH1AP07327 375 aa10.08□□□□□ -0.8
SMC2-205ENST00000493955 TLR1Q15399 786 aa10.08□□□□□ -0.8
SMC2-205ENST00000493955 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
SMC2-205ENST00000493955 ALDH1A1P00352 501 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 NNTQ13423 1086 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 COL19A1Q14993 1142 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 ESYT1Q9BSJ8 1104 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 CDK2AP1O14519 115 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 NDUFB5O43674 189 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 SPRYD7Q5W111 196 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 NBPF15Q8N660 670 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 RBCK1Q9BYM8 510 aa10.07□□□□□ -0.8
SMC2-205ENST00000493955 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
SMC2-205ENST00000493955 CLN3Q13286 438 aa10.06□□□□□ -0.8
SMC2-205ENST00000493955 COX20Q5RI15 118 aa10.06□□□□□ -0.8
SMC2-205ENST00000493955 IGSF5Q9NSI5 407 aa10.06□□□□□ -0.8
SMC2-205ENST00000493955 HRH3Q9Y5N1 445 aa10.06□□□□□ -0.8
SMC2-205ENST00000493955 USP3Q9Y6I4 520 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms