RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RALBP1Q15311 655 aa30.31■■■□□ 2.44
SNIP1-203ENST00000493916 PTGER2P43116 358 aa30.3■■■□□ 2.44
SNIP1-203ENST00000493916 NFATC2IPQ8NCF5 419 aa30.29■■■□□ 2.44
SNIP1-203ENST00000493916 GAS2L2Q8NHY3 880 aa30.29■■■□□ 2.44
SNIP1-203ENST00000493916 SLC16A10Q8TF71 515 aa30.29■■■□□ 2.44
SNIP1-203ENST00000493916 RNMTO43148 476 aaKnown RBP30.28■■■□□ 2.44
SNIP1-203ENST00000493916 U2AF1L5P0DN76 240 aaPredicted RBP30.28■■■□□ 2.44
SNIP1-203ENST00000493916 U2AF1Q01081 240 aaKnown RBP eCLIP30.28■■■□□ 2.44
SNIP1-203ENST00000493916 ATF5Q9Y2D1 282 aaPredicted RBP30.28■■■□□ 2.44
SNIP1-203ENST00000493916 VIRMAQ69YN4 1812 aaKnown RBP30.27■■■□□ 2.44
SNIP1-203ENST00000493916 PRKAR2BP31323 418 aa30.27■■■□□ 2.44
SNIP1-203ENST00000493916 SLC52A2Q9HAB3 445 aa30.27■■■□□ 2.44
SNIP1-203ENST00000493916 LGR6Q9HBX8 967 aa30.27■■■□□ 2.44
SNIP1-203ENST00000493916 PPP1R1BQ9UD71 204 aaPredicted RBP30.27■■■□□ 2.44
SNIP1-203ENST00000493916 MAP3K5Q99683 1374 aa30.27■■■□□ 2.44
SNIP1-203ENST00000493916 ATP6V1AP38606 617 aa30.26■■■□□ 2.43
SNIP1-203ENST00000493916 ITPK1Q13572 414 aa30.26■■■□□ 2.43
SNIP1-203ENST00000493916 COL24A1Q17RW2 1714 aa30.26■■■□□ 2.43
SNIP1-203ENST00000493916 LINC00116Q8NCU8 138 aa30.26■■■□□ 2.43
SNIP1-203ENST00000493916 SGIP1Q9BQI5 828 aa30.26■■■□□ 2.43
SNIP1-203ENST00000493916 FCHSD2O94868 740 aa30.25■■■□□ 2.43
SNIP1-203ENST00000493916 AK7Q96M32 723 aa30.25■■■□□ 2.43
SNIP1-203ENST00000493916 CICQ96RK0 1608 aaPredicted RBP30.23■■■□□ 2.43
SNIP1-203ENST00000493916 FLAD1Q8NFF5 587 aa30.23■■■□□ 2.43
SNIP1-203ENST00000493916 PHACTR3Q96KR7 559 aa30.23■■■□□ 2.43
SNIP1-203ENST00000493916 SLC4A9Q96Q91 983 aa30.23■■■□□ 2.43
SNIP1-203ENST00000493916 UBR3Q6ZT12 1888 aa30.23■■■□□ 2.43
SNIP1-203ENST00000493916 COL23A1Q86Y22 540 aaPredicted RBP30.22■■■□□ 2.43
SNIP1-203ENST00000493916 RBM42Q9BTD8 480 aaKnown RBP30.22■■■□□ 2.43
SNIP1-203ENST00000493916 COL5A3P25940 1745 aaPredicted RBP30.22■■■□□ 2.43
SNIP1-203ENST00000493916 GNAT3A8MTJ3 354 aa30.21■■■□□ 2.43
SNIP1-203ENST00000493916 MYBBP1AQ9BQG0 1328 aaKnown RBP30.18■■■□□ 2.42
SNIP1-203ENST00000493916 SSFA2P28290 1259 aa30.17■■■□□ 2.42
SNIP1-203ENST00000493916 AMIGO3Q86WK7 504 aa30.17■■■□□ 2.42
SNIP1-203ENST00000493916 TJP1Q07157 1748 aa30.16■■■□□ 2.42
SNIP1-203ENST00000493916 MSH5O43196 834 aa30.16■■■□□ 2.42
SNIP1-203ENST00000493916 PTCD1O75127 700 aaKnown RBP30.16■■■□□ 2.42
SNIP1-203ENST00000493916 CEMIPQ8WUJ3 1361 aa30.15■■■□□ 2.42
SNIP1-203ENST00000493916 IL17REQ8NFR9 667 aa30.15■■■□□ 2.42
SNIP1-203ENST00000493916 KCPQ6ZWJ8 1503 aa30.15■■■□□ 2.42
SNIP1-203ENST00000493916 CNTNAP4Q9C0A0 1308 aa30.15■■■□□ 2.42
SNIP1-203ENST00000493916 SIPA1L3O60292 1781 aaPredicted RBP30.15■■■□□ 2.42
SNIP1-203ENST00000493916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.14■■■□□ 2.42
SNIP1-203ENST00000493916 GNPATO15228 680 aa30.14■■■□□ 2.42
SNIP1-203ENST00000493916 RC3H1Q5TC82 1133 aaKnown RBP30.14■■■□□ 2.42
SNIP1-203ENST00000493916 ARXQ96QS3 562 aa30.14■■■□□ 2.42
SNIP1-203ENST00000493916 POLD1P28340 1107 aa30.13■■■□□ 2.41
SNIP1-203ENST00000493916 UBR2Q8IWV8 1755 aa30.13■■■□□ 2.41
SNIP1-203ENST00000493916 PHF14O94880 888 aa30.11■■■□□ 2.41
SNIP1-203ENST00000493916 TEFQ10587 303 aa30.11■■■□□ 2.41
SNIP1-203ENST00000493916 SLC39A6Q13433 755 aa30.1■■■□□ 2.41
SNIP1-203ENST00000493916 PLEKHF1Q96S99 279 aa30.09■■■□□ 2.41
SNIP1-203ENST00000493916 SMIM5Q71RC9 77 aa30.08■■■□□ 2.41
SNIP1-203ENST00000493916 FHDC1Q9C0D6 1143 aaPredicted RBP30.08■■■□□ 2.41
SNIP1-203ENST00000493916 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
SNIP1-203ENST00000493916 RTCBQ9Y3I0 505 aaKnown RBP30.08■■■□□ 2.41
SNIP1-203ENST00000493916 HTATSF1O43719 755 aaKnown RBP30.07■■■□□ 2.4
SNIP1-203ENST00000493916 NEFMP07197 916 aa30.07■■■□□ 2.4
SNIP1-203ENST00000493916 PNNQ9H307 717 aaKnown RBP30.07■■■□□ 2.4
SNIP1-203ENST00000493916 ADRA2BP18089 450 aa30.06■■■□□ 2.4
SNIP1-203ENST00000493916 VSIG10Q8N0Z9 540 aa30.06■■■□□ 2.4
SNIP1-203ENST00000493916 RTF1Q92541 710 aaKnown RBP30.06■■■□□ 2.4
SNIP1-203ENST00000493916 CRKLP46109 303 aaKnown RBP30.05■■■□□ 2.4
SNIP1-203ENST00000493916 MSL1Q68DK7 614 aa30.05■■■□□ 2.4
SNIP1-203ENST00000493916 TTC5Q8N0Z6 440 aa30.05■■■□□ 2.4
SNIP1-203ENST00000493916 MYH14Q7Z406 1995 aaKnown RBP30.04■■■□□ 2.4
SNIP1-203ENST00000493916 RPS6KA4O75676 772 aa30.04■■■□□ 2.4
SNIP1-203ENST00000493916 SYT17Q9BSW7 474 aa30.04■■■□□ 2.4
SNIP1-203ENST00000493916 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
SNIP1-203ENST00000493916 ZNF790Q6PG37 636 aa30.03■■■□□ 2.4
SNIP1-203ENST00000493916 DNAJC10Q8IXB1 793 aa30.03■■■□□ 2.4
SNIP1-203ENST00000493916 TRAPPC3LQ5T215 181 aa30.02■■■□□ 2.4
SNIP1-203ENST00000493916 MCM10Q7L590 875 aa30.02■■■□□ 2.4
SNIP1-203ENST00000493916 MAPK8IP3Q9UPT6 1336 aa30■■■□□ 2.39
SNIP1-203ENST00000493916 C4AP0C0L4 1744 aa30■■■□□ 2.39
SNIP1-203ENST00000493916 DLG5Q8TDM6 1919 aa29.99■■■□□ 2.39
SNIP1-203ENST00000493916 CYP19A1P11511 503 aaPredicted RBP29.99■■■□□ 2.39
SNIP1-203ENST00000493916 NFE2L2Q16236 605 aa29.99■■■□□ 2.39
SNIP1-203ENST00000493916 INTS5Q6P9B9 1019 aaKnown RBP29.99■■■□□ 2.39
SNIP1-203ENST00000493916 BTBD11A6QL63 1104 aa29.98■■■□□ 2.39
SNIP1-203ENST00000493916 ARHGEF1Q92888 912 aaKnown RBP29.98■■■□□ 2.39
SNIP1-203ENST00000493916 ZNF496Q96IT1 587 aaPredicted RBP29.98■■■□□ 2.39
SNIP1-203ENST00000493916 CCDC87Q9NVE4 849 aa29.98■■■□□ 2.39
SNIP1-203ENST00000493916 HEG1Q9ULI3 1381 aa29.98■■■□□ 2.39
SNIP1-203ENST00000493916 DCTN1Q14203 1278 aa29.96■■■□□ 2.39
SNIP1-203ENST00000493916 FMNL2Q96PY5 1086 aa29.95■■■□□ 2.39
SNIP1-203ENST00000493916 RFC4P35249 363 aa29.94■■■□□ 2.38
SNIP1-203ENST00000493916 SOS1Q07889 1333 aaPredicted RBP29.94■■■□□ 2.38
SNIP1-203ENST00000493916 WDR43Q15061 677 aaKnown RBP eCLIP29.92■■■□□ 2.38
SNIP1-203ENST00000493916 TEX13AQ9BXU3 409 aaPredicted RBP29.92■■■□□ 2.38
SNIP1-203ENST00000493916 DCAF8L1A6NGE4 600 aa29.91■■■□□ 2.38
SNIP1-203ENST00000493916 KCNQ3O43525 872 aa29.91■■■□□ 2.38
SNIP1-203ENST00000493916 STARD3NLO95772 234 aa29.91■■■□□ 2.38
SNIP1-203ENST00000493916 KLHL34Q8N239 644 aa29.91■■■□□ 2.38
SNIP1-203ENST00000493916 NLGN1Q8N2Q7 840 aa29.91■■■□□ 2.38
SNIP1-203ENST00000493916 GYS1P13807 737 aa29.9■■■□□ 2.38
SNIP1-203ENST00000493916 TAF7Q15545 349 aaPredicted RBP29.9■■■□□ 2.38
SNIP1-203ENST00000493916 ZBTB1Q9Y2K1 713 aa29.9■■■□□ 2.38
SNIP1-203ENST00000493916 USP42Q9H9J4 1324 aaKnown RBP29.9■■■□□ 2.38
SNIP1-203ENST00000493916 CD2APQ9Y5K6 639 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms