RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ZC3H4Q9UPT8 1303 aaKnown RBP9.57□□□□□ -0.88
TRA2B-216ENST00000493864 TRAK2O60296 914 aa9.57□□□□□ -0.88
TRA2B-216ENST00000493864 TRIM32Q13049 653 aa9.57□□□□□ -0.88
TRA2B-216ENST00000493864 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
TRA2B-216ENST00000493864 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
TRA2B-216ENST00000493864 PZPP20742 1482 aa9.56□□□□□ -0.88
TRA2B-216ENST00000493864 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
TRA2B-216ENST00000493864 GPKOWQ92917 476 aaPredicted RBP eCLIP9.56□□□□□ -0.88
TRA2B-216ENST00000493864 C3P01024 1663 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 SLC19A1P41440 591 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 RPIAP49247 311 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 VAC14Q08AM6 782 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 AGERQ15109 404 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 PDXDC2PQ6P474 469 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
TRA2B-216ENST00000493864 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
TRA2B-216ENST00000493864 CLTCQ00610 1675 aaKnown RBP9.55□□□□□ -0.88
TRA2B-216ENST00000493864 KANK1Q14678 1352 aa9.54□□□□□ -0.88
TRA2B-216ENST00000493864 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
TRA2B-216ENST00000493864 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
TRA2B-216ENST00000493864 FBXO45P0C2W1 286 aa9.54□□□□□ -0.88
TRA2B-216ENST00000493864 PTK2Q05397 1052 aa9.54□□□□□ -0.88
TRA2B-216ENST00000493864 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
TRA2B-216ENST00000493864 UNC13BO14795 1591 aa9.54□□□□□ -0.88
TRA2B-216ENST00000493864 EIF2AK4Q9P2K8 1649 aaKnown RBP9.53□□□□□ -0.88
TRA2B-216ENST00000493864 AGLP35573 1532 aa9.53□□□□□ -0.88
TRA2B-216ENST00000493864 SH3BP2P78314 561 aa9.53□□□□□ -0.88
TRA2B-216ENST00000493864 FOXJ1Q92949 421 aa9.53□□□□□ -0.88
TRA2B-216ENST00000493864 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
TRA2B-216ENST00000493864 WASHC2CQ9Y4E1 1318 aa9.53□□□□□ -0.88
TRA2B-216ENST00000493864 MROH1Q8NDA8 1641 aa9.53□□□□□ -0.88
TRA2B-216ENST00000493864 KDM5DQ9BY66 1539 aa9.52□□□□□ -0.88
TRA2B-216ENST00000493864 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 NR1H3Q13133 447 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 SH3BP5LQ7L8J4 393 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 SIN3AQ96ST3 1273 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.89
TRA2B-216ENST00000493864 DEPDC5O75140 1603 aa9.52□□□□□ -0.89
TRA2B-216ENST00000493864 FAM135AQ9P2D6 1515 aa9.51□□□□□ -0.89
TRA2B-216ENST00000493864 POM121CA8CG34 1229 aa9.51□□□□□ -0.89
TRA2B-216ENST00000493864 CEBPAP49715 358 aaPredicted RBP9.51□□□□□ -0.89
TRA2B-216ENST00000493864 SKOR1P84550 965 aa9.51□□□□□ -0.89
TRA2B-216ENST00000493864 BPHLQ86WA6 291 aaPredicted RBP9.51□□□□□ -0.89
TRA2B-216ENST00000493864 PRKD2Q9BZL6 878 aa9.51□□□□□ -0.89
TRA2B-216ENST00000493864 RNF17Q9BXT8 1623 aaKnown RBP9.51□□□□□ -0.89
TRA2B-216ENST00000493864 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
TRA2B-216ENST00000493864 VWDEQ8N2E2 1590 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 SETD1BQ9UPS6 1966 aaKnown RBP9.5□□□□□ -0.89
TRA2B-216ENST00000493864 IQGAP3Q86VI3 1631 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 WNT7BP56706 349 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 NEUROD1Q13562 356 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 ZBTB33Q86T24 672 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 OCSTAMPQ9BR26 566 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 MROH2AA6NES4 1674 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 PRDM15P57071 1507 aaPredicted RBP9.5□□□□□ -0.89
TRA2B-216ENST00000493864 CLSPNQ9HAW4 1339 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
TRA2B-216ENST00000493864 LMTK3Q96Q04 1460 aa9.49□□□□□ -0.89
TRA2B-216ENST00000493864 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
TRA2B-216ENST00000493864 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
TRA2B-216ENST00000493864 ADAM32Q8TC27 787 aa9.49□□□□□ -0.89
TRA2B-216ENST00000493864 ABCC3O15438 1527 aa9.48□□□□□ -0.89
TRA2B-216ENST00000493864 SPRYD7Q5W111 196 aa9.48□□□□□ -0.89
TRA2B-216ENST00000493864 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
TRA2B-216ENST00000493864 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRA2B-216ENST00000493864 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
TRA2B-216ENST00000493864 PCDHB9Q9Y5E1 797 aa9.47□□□□□ -0.89
TRA2B-216ENST00000493864 CEP152O94986 1710 aa9.47□□□□□ -0.89
TRA2B-216ENST00000493864 PLA2R1Q13018 1463 aa9.47□□□□□ -0.89
TRA2B-216ENST00000493864 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.89
TRA2B-216ENST00000493864 HSPA2P54652 639 aa9.46□□□□□ -0.9
TRA2B-216ENST00000493864 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
TRA2B-216ENST00000493864 EHBP1Q8NDI1 1231 aa9.46□□□□□ -0.9
TRA2B-216ENST00000493864 V9GY48 417 aaPredicted RBP9.46□□□□□ -0.9
TRA2B-216ENST00000493864 E9PCH4 1651 aa9.45□□□□□ -0.9
TRA2B-216ENST00000493864 TET3O43151 1660 aa9.45□□□□□ -0.9
TRA2B-216ENST00000493864 ERFEQ4G0M1 354 aa9.45□□□□□ -0.9
TRA2B-216ENST00000493864 ZNF598Q86UK7 904 aaKnown RBP9.45□□□□□ -0.9
TRA2B-216ENST00000493864 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
TRA2B-216ENST00000493864 ZEB1P37275 1124 aaPredicted RBP9.44□□□□□ -0.9
TRA2B-216ENST00000493864 SEMA3FQ13275 785 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
TRA2B-216ENST00000493864 GLMNQ92990 594 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
TRA2B-216ENST00000493864 ZMYM3Q14202 1370 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 PTPRTO14522 1441 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 NPATQ14207 1427 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 EFCAB6Q5THR3 1501 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 STRCQ7RTU9 1775 aa9.44□□□□□ -0.9
TRA2B-216ENST00000493864 MYO3AQ8NEV4 1616 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 ARHGAP31Q2M1Z3 1444 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 SOX11P35716 441 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 FOXC1Q12948 553 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 FAM174AQ8TBP5 190 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 SLC10A4Q96EP9 437 aa9.43□□□□□ -0.9
TRA2B-216ENST00000493864 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms