RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 MRC1P22897 1456 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 CHL1O00533 1208 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 NCLP19338 710 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 RRP1P56182 461 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 C1orf141Q5JVX7 400 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 PDCL3Q9H2J4 239 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 BTG4Q9NY30 223 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 CACNA1FO60840 1977 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 DISP2A7MBM2 1401 aa9.18□□□□□ -0.94
SMARCE1-211ENST00000493660 MCM10Q7L590 875 aa9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 DCTN1Q14203 1278 aa9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 LARP1Q6PKG0 1096 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 TSR2Q969E8 191 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 MBIPQ9NS73 344 aa9.17□□□□□ -0.94
SMARCE1-211ENST00000493660 HSP90AB1P08238 724 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 IL2RBP14784 551 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 GTF2E1P29083 439 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 EXOSC9Q06265 439 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 IL17REQ8NFR9 667 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 FRAT1Q92837 279 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 STRN4Q9NRL3 753 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 SOS1Q07889 1333 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 LRP6O75581 1613 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 THRAP3Q9Y2W1 955 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 PCDH11XQ9BZA7 1347 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 PCDH11YQ9BZA8 1340 aa9.16□□□□□ -0.94
SMARCE1-211ENST00000493660 RNMTO43148 476 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 PHKG2P15735 406 aa9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 ALDH1L2Q3SY69 923 aa9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 LAS1LQ9Y4W2 734 aaKnown RBP9.15□□□□□ -0.94
SMARCE1-211ENST00000493660 KDM6AO15550 1401 aaPredicted RBP9.15□□□□□ -0.95
SMARCE1-211ENST00000493660 ADAMTS2O95450 1211 aa9.15□□□□□ -0.95
SMARCE1-211ENST00000493660 PAPPAQ13219 1627 aa9.15□□□□□ -0.95
SMARCE1-211ENST00000493660 DCAF8L1A6NGE4 600 aa9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 NUTM2BA6NNL0 878 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 NUTM2EB1AL46 878 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 HSPA1LP34931 641 aa9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 NUTM2AQ8IVF1 878 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 ZCRB1Q8TBF4 217 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 RRAGDQ9NQL2 400 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 TSPYL4Q9UJ04 414 aa9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 TNS2Q63HR2 1409 aa9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
SMARCE1-211ENST00000493660 TOGARAM1Q9Y4F4 1720 aa9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 SPATA31A1Q5TZJ5 1347 aa9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 RGS3P49796 1198 aa9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 TEFQ10587 303 aa9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 NKX1-1Q15270 411 aaPredicted RBP9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 UBR2Q8IWV8 1755 aa9.13□□□□□ -0.95
SMARCE1-211ENST00000493660 SPATA31A5Q5VU36 1347 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 SPATA31A7Q8IWB4 1347 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 VAMP4O75379 141 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 TWISTNBQ3B726 338 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 UNC5CLQ8IV45 518 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 FNBP4Q8N3X1 1017 aaPredicted RBP9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 CHMP4BQ9H444 224 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 ITGB4P16144 1822 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 BCL9LQ86UU0 1499 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 KIF16BQ96L93 1317 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 CYP27B1O15528 508 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 TPM2P07951 284 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 CLCN1P35523 988 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 CHMP4AQ9BY43 222 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
SMARCE1-211ENST00000493660 HOXB7P09629 217 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 MS4A1P11836 297 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 VPS72Q15906 364 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 BARGINQ6ZT62 677 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 THSD7AQ9UPZ6 1657 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 BCAR3O75815 825 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 PDE3AQ14432 1141 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 SLC52A2Q9HAB3 445 aa9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 N4BP2Q86UW6 1770 aaPredicted RBP9.11□□□□□ -0.95
SMARCE1-211ENST00000493660 ERVV-2B6SEH9 535 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 IRX6P78412 446 aaPredicted RBP9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 SSH1Q8WYL5 1049 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 NGLY1Q96IV0 654 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 DOT1LQ8TEK3 1739 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 BTBD11A6QL63 1104 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 C8orf37Q96NL8 207 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 C5P01031 1676 aa9.1□□□□□ -0.95
SMARCE1-211ENST00000493660 IPO8O15397 1037 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-211ENST00000493660 SMAP1Q8IYB5 467 aaPredicted RBP9.09□□□□□ -0.95
SMARCE1-211ENST00000493660 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
SMARCE1-211ENST00000493660 HEG1Q9ULI3 1381 aa9.09□□□□□ -0.95
SMARCE1-211ENST00000493660 GLI3P10071 1580 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms