RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
SOX2-OT-215ENST00000493521 AK7Q96M32 723 aa13.95□□□□□ -0.18
SOX2-OT-215ENST00000493521 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
SOX2-OT-215ENST00000493521 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
SOX2-OT-215ENST00000493521 SMARCC1Q92922 1105 aaPredicted RBP13.94□□□□□ -0.18
SOX2-OT-215ENST00000493521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
SOX2-OT-215ENST00000493521 MYH14Q7Z406 1995 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-215ENST00000493521 COL5A3P25940 1745 aaPredicted RBP13.93□□□□□ -0.18
SOX2-OT-215ENST00000493521 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
SOX2-OT-215ENST00000493521 GNPATO15228 680 aa13.93□□□□□ -0.18
SOX2-OT-215ENST00000493521 IL13P35225 146 aa13.93□□□□□ -0.18
SOX2-OT-215ENST00000493521 ZNF530Q6P9A1 599 aaPredicted RBP13.93□□□□□ -0.18
SOX2-OT-215ENST00000493521 MORC1Q86VD1 984 aa13.93□□□□□ -0.18
SOX2-OT-215ENST00000493521 CNGB1Q14028 1251 aaPredicted RBP13.92□□□□□ -0.18
SOX2-OT-215ENST00000493521 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
SOX2-OT-215ENST00000493521 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
SOX2-OT-215ENST00000493521 C4AP0C0L4 1744 aa13.9□□□□□ -0.18
SOX2-OT-215ENST00000493521 TJP1Q07157 1748 aa13.9□□□□□ -0.18
SOX2-OT-215ENST00000493521 PER1O15534 1290 aaPredicted RBP13.9□□□□□ -0.18
SOX2-OT-215ENST00000493521 DDX10Q13206 875 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-215ENST00000493521 N4BP2Q86UW6 1770 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-215ENST00000493521 PTCD1O75127 700 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-215ENST00000493521 HMOX1P09601 288 aa13.89□□□□□ -0.19
SOX2-OT-215ENST00000493521 SSFA2P28290 1259 aa13.89□□□□□ -0.19
SOX2-OT-215ENST00000493521 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
SOX2-OT-215ENST00000493521 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 VIRMAQ69YN4 1812 aaKnown RBP13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 MTHFSP49914 203 aa13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 PLEKHO1Q53GL0 409 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 CD2APQ9Y5K6 639 aa13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 CICQ96RK0 1608 aaPredicted RBP13.88□□□□□ -0.19
SOX2-OT-215ENST00000493521 ERVV-2B6SEH9 535 aa13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 MMP10P09238 476 aa13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 CABP4P57796 275 aa13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 FLAD1Q8NFF5 587 aa13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 SRP68Q9UHB9 627 aaKnown RBP13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 ADAMTS7Q9UKP4 1686 aa13.87□□□□□ -0.19
SOX2-OT-215ENST00000493521 ZNF831Q5JPB2 1677 aa13.86□□□□□ -0.19
SOX2-OT-215ENST00000493521 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
SOX2-OT-215ENST00000493521 PXDNLA1KZ92 1463 aa13.86□□□□□ -0.19
SOX2-OT-215ENST00000493521 ATP10DQ9P241 1426 aa13.85□□□□□ -0.19
SOX2-OT-215ENST00000493521 GYS1P13807 737 aa13.85□□□□□ -0.19
SOX2-OT-215ENST00000493521 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
SOX2-OT-215ENST00000493521 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
SOX2-OT-215ENST00000493521 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
SOX2-OT-215ENST00000493521 ZNF526Q8TF50 670 aaPredicted RBP13.84□□□□□ -0.19
SOX2-OT-215ENST00000493521 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
SOX2-OT-215ENST00000493521 ADCY9O60503 1353 aa13.83□□□□□ -0.19
SOX2-OT-215ENST00000493521 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 A0A0G2JLW4 131 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 CRKLP46109 303 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 MIER1Q8N108 512 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.2
SOX2-OT-215ENST00000493521 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
SOX2-OT-215ENST00000493521 DDR1Q08345 913 aa13.82□□□□□ -0.2
SOX2-OT-215ENST00000493521 FKBP8Q14318 412 aa13.82□□□□□ -0.2
SOX2-OT-215ENST00000493521 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
SOX2-OT-215ENST00000493521 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-215ENST00000493521 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
SOX2-OT-215ENST00000493521 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
SOX2-OT-215ENST00000493521 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-215ENST00000493521 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
SOX2-OT-215ENST00000493521 HSP90AB1P08238 724 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-215ENST00000493521 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
SOX2-OT-215ENST00000493521 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
SOX2-OT-215ENST00000493521 MRC1P22897 1456 aa13.8□□□□□ -0.2
SOX2-OT-215ENST00000493521 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
SOX2-OT-215ENST00000493521 GIGYF1O75420 1035 aaPredicted RBP13.8□□□□□ -0.2
SOX2-OT-215ENST00000493521 DPEP1P16444 411 aa13.8□□□□□ -0.2
SOX2-OT-215ENST00000493521 KCNA3P22001 575 aa13.8□□□□□ -0.2
SOX2-OT-215ENST00000493521 SLC52A2Q9HAB3 445 aa13.8□□□□□ -0.2
SOX2-OT-215ENST00000493521 AKAP4Q5JQC9 854 aa13.79□□□□□ -0.2
SOX2-OT-215ENST00000493521 RFC4P35249 363 aa13.78□□□□□ -0.2
SOX2-OT-215ENST00000493521 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
SOX2-OT-215ENST00000493521 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
SOX2-OT-215ENST00000493521 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
SOX2-OT-215ENST00000493521 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
SOX2-OT-215ENST00000493521 ZBTB1Q9Y2K1 713 aa13.77□□□□□ -0.21
SOX2-OT-215ENST00000493521 UBR2Q8IWV8 1755 aa13.76□□□□□ -0.21
SOX2-OT-215ENST00000493521 KCNQ3O43525 872 aa13.76□□□□□ -0.21
SOX2-OT-215ENST00000493521 CYP19A1P11511 503 aaPredicted RBP13.76□□□□□ -0.21
SOX2-OT-215ENST00000493521 CHRNA5P30532 468 aa13.76□□□□□ -0.21
SOX2-OT-215ENST00000493521 NLGN1Q8N2Q7 840 aa13.76□□□□□ -0.21
SOX2-OT-215ENST00000493521 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
SOX2-OT-215ENST00000493521 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-215ENST00000493521 USPL1Q5W0Q7 1092 aa13.75□□□□□ -0.21
SOX2-OT-215ENST00000493521 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
SOX2-OT-215ENST00000493521 PHACTR3Q96KR7 559 aa13.75□□□□□ -0.21
SOX2-OT-215ENST00000493521 SIPA1L3O60292 1781 aaPredicted RBP13.75□□□□□ -0.21
SOX2-OT-215ENST00000493521 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms