RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 EIF4G2P78344 907 aaKnown RBP eCLIP30.98■■■□□ 2.55
HMG20B-214ENST00000493191 WWC3Q9ULE0 1092 aa30.98■■■□□ 2.55
HMG20B-214ENST00000493191 IGSF1Q8N6C5 1336 aa30.97■■■□□ 2.55
HMG20B-214ENST00000493191 ATP10DQ9P241 1426 aa30.92■■■□□ 2.54
HMG20B-214ENST00000493191 ERVV-2B6SEH9 535 aa30.92■■■□□ 2.54
HMG20B-214ENST00000493191 PLEKHO1Q53GL0 409 aaPredicted RBP30.91■■■□□ 2.54
HMG20B-214ENST00000493191 RBM42Q9BTD8 480 aaKnown RBP30.91■■■□□ 2.54
HMG20B-214ENST00000493191 PLEKHG2Q9H7P9 1386 aa30.91■■■□□ 2.54
HMG20B-214ENST00000493191 DCAF5Q96JK2 942 aa30.9■■■□□ 2.54
HMG20B-214ENST00000493191 SLC4A9Q96Q91 983 aa30.9■■■□□ 2.54
HMG20B-214ENST00000493191 HSP90AB1P08238 724 aaKnown RBP30.89■■■□□ 2.54
HMG20B-214ENST00000493191 ZNF530Q6P9A1 599 aaPredicted RBP30.89■■■□□ 2.54
HMG20B-214ENST00000493191 KDRP35968 1356 aa30.89■■■□□ 2.54
HMG20B-214ENST00000493191 MMP10P09238 476 aa30.88■■■□□ 2.53
HMG20B-214ENST00000493191 TRAPPC3LQ5T215 181 aa30.88■■■□□ 2.53
HMG20B-214ENST00000493191 MORC1Q86VD1 984 aa30.88■■■□□ 2.53
HMG20B-214ENST00000493191 RTCBQ9Y3I0 505 aaKnown RBP30.87■■■□□ 2.53
HMG20B-214ENST00000493191 AEBP1Q8IUX7 1158 aa30.86■■■□□ 2.53
HMG20B-214ENST00000493191 KDM6AO15550 1401 aaPredicted RBP30.85■■■□□ 2.53
HMG20B-214ENST00000493191 CABP4P57796 275 aa30.85■■■□□ 2.53
HMG20B-214ENST00000493191 AMOTQ4VCS5 1084 aa30.85■■■□□ 2.53
HMG20B-214ENST00000493191 ZNF526Q8TF50 670 aaPredicted RBP30.84■■■□□ 2.53
HMG20B-214ENST00000493191 GPBP1L1Q9HC44 474 aaPredicted RBP30.84■■■□□ 2.53
HMG20B-214ENST00000493191 MTHFSP49914 203 aa30.82■■■□□ 2.52
HMG20B-214ENST00000493191 ARHGEF1Q92888 912 aaKnown RBP30.82■■■□□ 2.52
HMG20B-214ENST00000493191 ADCY9O60503 1353 aa30.81■■■□□ 2.52
HMG20B-214ENST00000493191 RC3H1Q5TC82 1133 aaKnown RBP30.81■■■□□ 2.52
HMG20B-214ENST00000493191 ZNF831Q5JPB2 1677 aa30.81■■■□□ 2.52
HMG20B-214ENST00000493191 C1orf141Q5JVX7 400 aa30.8■■■□□ 2.52
HMG20B-214ENST00000493191 NLGN1Q8N2Q7 840 aa30.8■■■□□ 2.52
HMG20B-214ENST00000493191 CEP350Q5VT06 3117 aa30.8■■■□□ 2.52
HMG20B-214ENST00000493191 COL5A3P25940 1745 aaPredicted RBP30.79■■■□□ 2.52
HMG20B-214ENST00000493191 SULT6B1Q6IMI4 303 aa30.79■■■□□ 2.52
HMG20B-214ENST00000493191 KNSTRNQ9Y448 316 aa30.79■■■□□ 2.52
HMG20B-214ENST00000493191 CNTNAP4Q9C0A0 1308 aa30.78■■■□□ 2.52
HMG20B-214ENST00000493191 MYH14Q7Z406 1995 aaKnown RBP30.78■■■□□ 2.52
HMG20B-214ENST00000493191 CICQ96RK0 1608 aaPredicted RBP30.78■■■□□ 2.52
HMG20B-214ENST00000493191 PTCD1O75127 700 aaKnown RBP30.78■■■□□ 2.52
HMG20B-214ENST00000493191 RPS6KA4O75676 772 aa30.78■■■□□ 2.52
HMG20B-214ENST00000493191 ADRA2BP18089 450 aa30.78■■■□□ 2.52
HMG20B-214ENST00000493191 CCER1Q8TC90 406 aaPredicted RBP30.78■■■□□ 2.52
HMG20B-214ENST00000493191 RFC4P35249 363 aa30.77■■■□□ 2.52
HMG20B-214ENST00000493191 NFATC2IPQ8NCF5 419 aa30.77■■■□□ 2.52
HMG20B-214ENST00000493191 PXDNLA1KZ92 1463 aa30.76■■■□□ 2.51
HMG20B-214ENST00000493191 KIF13BQ9NQT8 1826 aa30.75■■■□□ 2.51
HMG20B-214ENST00000493191 N4BP2Q86UW6 1770 aaPredicted RBP30.75■■■□□ 2.51
HMG20B-214ENST00000493191 A0A0G2JLW4 131 aa30.75■■■□□ 2.51
HMG20B-214ENST00000493191 GYS1P13807 737 aa30.75■■■□□ 2.51
HMG20B-214ENST00000493191 IL13P35225 146 aa30.74■■■□□ 2.51
HMG20B-214ENST00000493191 TGFB2P61812 414 aa30.74■■■□□ 2.51
HMG20B-214ENST00000493191 BCS1LQ9Y276 419 aa30.72■■■□□ 2.51
HMG20B-214ENST00000493191 KIAA1551Q9HCM1 1747 aa30.72■■■□□ 2.51
HMG20B-214ENST00000493191 CRKLP46109 303 aaKnown RBP30.71■■■□□ 2.51
HMG20B-214ENST00000493191 CCDC87Q9NVE4 849 aa30.71■■■□□ 2.51
HMG20B-214ENST00000493191 PARP3Q9Y6F1 533 aa30.71■■■□□ 2.51
HMG20B-214ENST00000493191 C10orf71Q711Q0 1435 aa30.71■■■□□ 2.51
HMG20B-214ENST00000493191 DPEP1P16444 411 aa30.69■■■□□ 2.5
HMG20B-214ENST00000493191 AMER1Q5JTC6 1135 aaPredicted RBP30.69■■■□□ 2.5
HMG20B-214ENST00000493191 C4AP0C0L4 1744 aa30.69■■■□□ 2.5
HMG20B-214ENST00000493191 SRP68Q9UHB9 627 aaKnown RBP30.67■■■□□ 2.5
HMG20B-214ENST00000493191 SCN11AQ9UI33 1791 aa30.66■■■□□ 2.5
HMG20B-214ENST00000493191 AKAP4Q5JQC9 854 aa30.64■■■□□ 2.5
HMG20B-214ENST00000493191 ARHGAP27Q6ZUM4 889 aa30.64■■■□□ 2.5
HMG20B-214ENST00000493191 LGR6Q9HBX8 967 aa30.64■■■□□ 2.5
HMG20B-214ENST00000493191 FCHSD2O94868 740 aa30.63■■■□□ 2.49
HMG20B-214ENST00000493191 FKBP8Q14318 412 aa30.63■■■□□ 2.49
HMG20B-214ENST00000493191 TJP1Q07157 1748 aa30.63■■■□□ 2.49
HMG20B-214ENST00000493191 HMOX1P09601 288 aa30.62■■■□□ 2.49
HMG20B-214ENST00000493191 INTS5Q6P9B9 1019 aaKnown RBP30.62■■■□□ 2.49
HMG20B-214ENST00000493191 SLC52A2Q9HAB3 445 aa30.62■■■□□ 2.49
HMG20B-214ENST00000493191 KIF7Q2M1P5 1343 aa30.62■■■□□ 2.49
HMG20B-214ENST00000493191 KIF3CO14782 793 aa30.61■■■□□ 2.49
HMG20B-214ENST00000493191 HSPA6P17066 643 aa30.61■■■□□ 2.49
HMG20B-214ENST00000493191 USP42Q9H9J4 1324 aaKnown RBP30.61■■■□□ 2.49
HMG20B-214ENST00000493191 KCNA3P22001 575 aa30.6■■■□□ 2.49
HMG20B-214ENST00000493191 DNAJC10Q8IXB1 793 aa30.6■■■□□ 2.49
HMG20B-214ENST00000493191 BRCA1P38398 1863 aaKnown RBP30.59■■■□□ 2.49
HMG20B-214ENST00000493191 DDR1Q08345 913 aa30.59■■■□□ 2.49
HMG20B-214ENST00000493191 RNMTO43148 476 aaKnown RBP30.57■■■□□ 2.48
HMG20B-214ENST00000493191 SLC39A6Q13433 755 aa30.57■■■□□ 2.48
HMG20B-214ENST00000493191 CC2D1BQ5T0F9 858 aaKnown RBP30.56■■■□□ 2.48
HMG20B-214ENST00000493191 PIM2Q9P1W9 311 aa30.56■■■□□ 2.48
HMG20B-214ENST00000493191 VIRMAQ69YN4 1812 aaKnown RBP30.54■■■□□ 2.48
HMG20B-214ENST00000493191 ZPR1O75312 459 aa30.54■■■□□ 2.48
HMG20B-214ENST00000493191 MTHFSDQ2M296 383 aaKnown RBP30.54■■■□□ 2.48
HMG20B-214ENST00000493191 PER1O15534 1290 aaPredicted RBP30.53■■■□□ 2.48
HMG20B-214ENST00000493191 DIAPH1O60610 1272 aaKnown RBP30.53■■■□□ 2.48
HMG20B-214ENST00000493191 ADAMTS7Q9UKP4 1686 aa30.52■■■□□ 2.48
HMG20B-214ENST00000493191 POLRMTO00411 1230 aaKnown RBP30.52■■■□□ 2.48
HMG20B-214ENST00000493191 CYP19A1P11511 503 aaPredicted RBP30.52■■■□□ 2.48
HMG20B-214ENST00000493191 TM4SF1P30408 202 aa30.52■■■□□ 2.48
HMG20B-214ENST00000493191 USPL1Q5W0Q7 1092 aa30.52■■■□□ 2.48
HMG20B-214ENST00000493191 SOS1Q07889 1333 aaPredicted RBP30.51■■■□□ 2.48
HMG20B-214ENST00000493191 CHRNA5P30532 468 aa30.51■■■□□ 2.47
HMG20B-214ENST00000493191 DALRD3Q5D0E6 543 aaKnown RBP30.51■■■□□ 2.47
HMG20B-214ENST00000493191 ARFGEF1Q9Y6D6 1849 aa30.51■■■□□ 2.47
HMG20B-214ENST00000493191 MRC1P22897 1456 aa30.5■■■□□ 2.47
HMG20B-214ENST00000493191 C9orf131Q5VYM1 1079 aa30.5■■■□□ 2.47
HMG20B-214ENST00000493191 NMRK2Q9NPI5 230 aa30.48■■■□□ 2.47
HMG20B-214ENST00000493191 KCPQ6ZWJ8 1503 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms