RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 PPP2R1AP30153 589 aa25.4■■□□□ 1.66
SSC4D-202ENST00000492979 ADAMTS7Q9UKP4 1686 aa25.39■■□□□ 1.66
SSC4D-202ENST00000492979 RC3H1Q5TC82 1133 aaKnown RBP25.39■■□□□ 1.66
SSC4D-202ENST00000492979 SYT17Q9BSW7 474 aa25.39■■□□□ 1.66
SSC4D-202ENST00000492979 ATP6V1AP38606 617 aa25.38■■□□□ 1.65
SSC4D-202ENST00000492979 ITPK1Q13572 414 aa25.38■■□□□ 1.65
SSC4D-202ENST00000492979 MTHFSDQ2M296 383 aaKnown RBP25.38■■□□□ 1.65
SSC4D-202ENST00000492979 NFATC2IPQ8NCF5 419 aa25.38■■□□□ 1.65
SSC4D-202ENST00000492979 SCN11AQ9UI33 1791 aa25.38■■□□□ 1.65
SSC4D-202ENST00000492979 POLD1P28340 1107 aa25.37■■□□□ 1.65
SSC4D-202ENST00000492979 LINC00116Q8NCU8 138 aa25.37■■□□□ 1.65
SSC4D-202ENST00000492979 SLC4A9Q96Q91 983 aa25.37■■□□□ 1.65
SSC4D-202ENST00000492979 MRC1P22897 1456 aa25.36■■□□□ 1.65
SSC4D-202ENST00000492979 AK7Q96M32 723 aa25.36■■□□□ 1.65
SSC4D-202ENST00000492979 FHDC1Q9C0D6 1143 aaPredicted RBP25.36■■□□□ 1.65
SSC4D-202ENST00000492979 SLC52A2Q9HAB3 445 aa25.36■■□□□ 1.65
SSC4D-202ENST00000492979 NUDCQ9Y266 331 aa25.36■■□□□ 1.65
SSC4D-202ENST00000492979 UBR3Q6ZT12 1888 aa25.35■■□□□ 1.65
SSC4D-202ENST00000492979 RNMTO43148 476 aaKnown RBP25.35■■□□□ 1.65
SSC4D-202ENST00000492979 CICQ96RK0 1608 aaPredicted RBP25.34■■□□□ 1.65
SSC4D-202ENST00000492979 GAS2L2Q8NHY3 880 aa25.34■■□□□ 1.65
SSC4D-202ENST00000492979 LGR6Q9HBX8 967 aa25.33■■□□□ 1.65
SSC4D-202ENST00000492979 CNTNAP4Q9C0A0 1308 aa25.33■■□□□ 1.64
SSC4D-202ENST00000492979 U2SURPO15042 1029 aaKnown RBP25.32■■□□□ 1.64
SSC4D-202ENST00000492979 FCHSD2O94868 740 aa25.32■■□□□ 1.64
SSC4D-202ENST00000492979 ADRA2BP18089 450 aa25.32■■□□□ 1.64
SSC4D-202ENST00000492979 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.31■■□□□ 1.64
SSC4D-202ENST00000492979 AMIGO3Q86WK7 504 aa25.31■■□□□ 1.64
SSC4D-202ENST00000492979 RSPH6AQ9H0K4 717 aa25.31■■□□□ 1.64
SSC4D-202ENST00000492979 DCAF8L1A6NGE4 600 aa25.3■■□□□ 1.64
SSC4D-202ENST00000492979 RBM42Q9BTD8 480 aaKnown RBP25.28■■□□□ 1.64
SSC4D-202ENST00000492979 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
SSC4D-202ENST00000492979 GNAT3A8MTJ3 354 aa25.27■■□□□ 1.64
SSC4D-202ENST00000492979 RPS6KA4O75676 772 aa25.27■■□□□ 1.64
SSC4D-202ENST00000492979 VSIG10Q8N0Z9 540 aa25.27■■□□□ 1.64
SSC4D-202ENST00000492979 GNPATO15228 680 aa25.26■■□□□ 1.63
SSC4D-202ENST00000492979 MSH5O43196 834 aa25.26■■□□□ 1.63
SSC4D-202ENST00000492979 CNGB1Q14028 1251 aaPredicted RBP25.26■■□□□ 1.63
SSC4D-202ENST00000492979 RTCBQ9Y3I0 505 aaKnown RBP25.26■■□□□ 1.63
SSC4D-202ENST00000492979 CEMIPQ8WUJ3 1361 aa25.26■■□□□ 1.63
SSC4D-202ENST00000492979 RALBP1Q15311 655 aa25.25■■□□□ 1.63
SSC4D-202ENST00000492979 IL17REQ8NFR9 667 aa25.25■■□□□ 1.63
SSC4D-202ENST00000492979 PRKAR2BP31323 418 aa25.24■■□□□ 1.63
SSC4D-202ENST00000492979 TRAPPC3LQ5T215 181 aa25.24■■□□□ 1.63
SSC4D-202ENST00000492979 PHACTR3Q96KR7 559 aa25.24■■□□□ 1.63
SSC4D-202ENST00000492979 CD2APQ9Y5K6 639 aa25.24■■□□□ 1.63
SSC4D-202ENST00000492979 PTCD1O75127 700 aaKnown RBP25.23■■□□□ 1.63
SSC4D-202ENST00000492979 UTRNP46939 3433 aa25.22■■□□□ 1.63
SSC4D-202ENST00000492979 HTATSF1O43719 755 aaKnown RBP25.22■■□□□ 1.63
SSC4D-202ENST00000492979 U2AF1L5P0DN76 240 aaPredicted RBP25.22■■□□□ 1.63
SSC4D-202ENST00000492979 U2AF1Q01081 240 aaKnown RBP eCLIP25.22■■□□□ 1.63
SSC4D-202ENST00000492979 MYH14Q7Z406 1995 aaKnown RBP25.22■■□□□ 1.63
SSC4D-202ENST00000492979 VIRMAQ69YN4 1812 aaKnown RBP25.21■■□□□ 1.63
SSC4D-202ENST00000492979 NLGN1Q8N2Q7 840 aa25.2■■□□□ 1.62
SSC4D-202ENST00000492979 ARHGEF1Q92888 912 aaKnown RBP25.2■■□□□ 1.62
SSC4D-202ENST00000492979 KCPQ6ZWJ8 1503 aa25.19■■□□□ 1.62
SSC4D-202ENST00000492979 PHF14O94880 888 aa25.19■■□□□ 1.62
SSC4D-202ENST00000492979 CRKLP46109 303 aaKnown RBP25.19■■□□□ 1.62
SSC4D-202ENST00000492979 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
SSC4D-202ENST00000492979 INTS5Q6P9B9 1019 aaKnown RBP25.18■■□□□ 1.62
SSC4D-202ENST00000492979 TJP1Q07157 1748 aa25.17■■□□□ 1.62
SSC4D-202ENST00000492979 CYP19A1P11511 503 aaPredicted RBP25.17■■□□□ 1.62
SSC4D-202ENST00000492979 TEFQ10587 303 aa25.17■■□□□ 1.62
SSC4D-202ENST00000492979 UBR2Q8IWV8 1755 aa25.16■■□□□ 1.62
SSC4D-202ENST00000492979 SLC39A6Q13433 755 aa25.16■■□□□ 1.62
SSC4D-202ENST00000492979 MSL1Q68DK7 614 aa25.16■■□□□ 1.62
SSC4D-202ENST00000492979 ZNF790Q6PG37 636 aa25.16■■□□□ 1.62
SSC4D-202ENST00000492979 SMIM5Q71RC9 77 aa25.16■■□□□ 1.62
SSC4D-202ENST00000492979 SIPA1L3O60292 1781 aaPredicted RBP25.16■■□□□ 1.62
SSC4D-202ENST00000492979 DDX10Q13206 875 aaKnown RBP25.15■■□□□ 1.62
SSC4D-202ENST00000492979 TEX13AQ9BXU3 409 aaPredicted RBP25.15■■□□□ 1.62
SSC4D-202ENST00000492979 PNNQ9H307 717 aaKnown RBP25.15■■□□□ 1.62
SSC4D-202ENST00000492979 GOLGB1Q14789 3259 aaKnown RBP25.14■■□□□ 1.62
SSC4D-202ENST00000492979 GYS1P13807 737 aa25.14■■□□□ 1.62
SSC4D-202ENST00000492979 DNAJC10Q8IXB1 793 aa25.14■■□□□ 1.62
SSC4D-202ENST00000492979 PLEKHF1Q96S99 279 aa25.14■■□□□ 1.62
SSC4D-202ENST00000492979 RFC4P35249 363 aa25.13■■□□□ 1.61
SSC4D-202ENST00000492979 CCDC87Q9NVE4 849 aa25.13■■□□□ 1.61
SSC4D-202ENST00000492979 TTC5Q8N0Z6 440 aa25.12■■□□□ 1.61
SSC4D-202ENST00000492979 NLGN2Q8NFZ4 835 aa25.11■■□□□ 1.61
SSC4D-202ENST00000492979 SOS1Q07889 1333 aaPredicted RBP25.11■■□□□ 1.61
SSC4D-202ENST00000492979 HEG1Q9ULI3 1381 aa25.1■■□□□ 1.61
SSC4D-202ENST00000492979 RTF1Q92541 710 aaKnown RBP25.1■■□□□ 1.61
SSC4D-202ENST00000492979 ZNF496Q96IT1 587 aaPredicted RBP25.1■■□□□ 1.61
SSC4D-202ENST00000492979 USP42Q9H9J4 1324 aaKnown RBP25.1■■□□□ 1.61
SSC4D-202ENST00000492979 STARD3NLO95772 234 aa25.09■■□□□ 1.61
SSC4D-202ENST00000492979 MYBBP1AQ9BQG0 1328 aaKnown RBP25.09■■□□□ 1.61
SSC4D-202ENST00000492979 NEFMP07197 916 aa25.08■■□□□ 1.61
SSC4D-202ENST00000492979 MMP10P09238 476 aa25.08■■□□□ 1.61
SSC4D-202ENST00000492979 FMNL2Q96PY5 1086 aa25.08■■□□□ 1.61
SSC4D-202ENST00000492979 GRIN3BO60391 1043 aa25.07■■□□□ 1.6
SSC4D-202ENST00000492979 YY1P25490 414 aa25.07■■□□□ 1.6
SSC4D-202ENST00000492979 C4AP0C0L4 1744 aa25.06■■□□□ 1.6
SSC4D-202ENST00000492979 BTBD11A6QL63 1104 aa25.06■■□□□ 1.6
SSC4D-202ENST00000492979 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
SSC4D-202ENST00000492979 TGFB2P61812 414 aa25.05■■□□□ 1.6
SSC4D-202ENST00000492979 GPR162Q16538 588 aa25.05■■□□□ 1.6
SSC4D-202ENST00000492979 NARFQ9UHQ1 456 aa25.05■■□□□ 1.6
SSC4D-202ENST00000492979 TM4SF1P30408 202 aa25.04■■□□□ 1.6
SSC4D-202ENST00000492979 KIF13BQ9NQT8 1826 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms