RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
TPR-208ENST00000492973 KIF14Q15058 1648 aa10.6□□□□□ -0.71
TPR-208ENST00000492973 ABCA9Q8IUA7 1624 aa10.6□□□□□ -0.71
TPR-208ENST00000492973 TRAK2O60296 914 aa10.6□□□□□ -0.71
TPR-208ENST00000492973 EHBP1L1Q8N3D4 1523 aa10.59□□□□□ -0.71
TPR-208ENST00000492973 MAP3K4Q9Y6R4 1608 aa10.59□□□□□ -0.71
TPR-208ENST00000492973 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
TPR-208ENST00000492973 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
TPR-208ENST00000492973 TTC37Q6PGP7 1564 aa10.59□□□□□ -0.71
TPR-208ENST00000492973 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
TPR-208ENST00000492973 PLCH2O75038 1416 aa10.58□□□□□ -0.72
TPR-208ENST00000492973 CHIC2Q9UKJ5 165 aa10.58□□□□□ -0.72
TPR-208ENST00000492973 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
TPR-208ENST00000492973 CCDC85AQ96PX6 553 aaPredicted RBP10.57□□□□□ -0.72
TPR-208ENST00000492973 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
TPR-208ENST00000492973 PPRC1Q5VV67 1664 aaKnown RBP10.57□□□□□ -0.72
TPR-208ENST00000492973 NCOA2Q15596 1464 aa10.56□□□□□ -0.72
TPR-208ENST00000492973 LILRA1O75019 489 aa10.56□□□□□ -0.72
TPR-208ENST00000492973 SLFNL1Q499Z3 407 aa10.56□□□□□ -0.72
TPR-208ENST00000492973 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
TPR-208ENST00000492973 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
TPR-208ENST00000492973 TEX14Q8IWB6 1497 aa10.55□□□□□ -0.72
TPR-208ENST00000492973 COL17A1Q9UMD9 1497 aaPredicted RBP10.55□□□□□ -0.72
TPR-208ENST00000492973 CCNB3Q8WWL7 1395 aa10.55□□□□□ -0.72
TPR-208ENST00000492973 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
TPR-208ENST00000492973 Q6ZVU0 165 aa10.55□□□□□ -0.72
TPR-208ENST00000492973 PPARGC1BQ86YN6 1023 aaKnown RBP10.55□□□□□ -0.72
TPR-208ENST00000492973 RNF135Q8IUD6 432 aa10.55□□□□□ -0.72
TPR-208ENST00000492973 MEIOBQ8N635 442 aa10.55□□□□□ -0.72
TPR-208ENST00000492973 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
TPR-208ENST00000492973 GLMNQ92990 594 aa10.54□□□□□ -0.72
TPR-208ENST00000492973 PCDHB11Q9Y5F2 797 aa10.54□□□□□ -0.72
TPR-208ENST00000492973 NEO1Q92859 1461 aa10.54□□□□□ -0.72
TPR-208ENST00000492973 ARAP3Q8WWN8 1544 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 PHLDB1Q86UU1 1377 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 AKNAQ7Z591 1439 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 PIK3CDO00329 1044 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 ERVK-9P63128 1117 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 CBLBQ13191 982 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 TSGA10IPQ3SY00 556 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 TRIM46Q7Z4K8 759 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 ATP13A2Q9NQ11 1180 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 CFDP1Q9UEE9 299 aaPredicted RBP10.53□□□□□ -0.72
TPR-208ENST00000492973 FANCAO15360 1455 aa10.53□□□□□ -0.72
TPR-208ENST00000492973 BMP1P13497 986 aa10.52□□□□□ -0.73
TPR-208ENST00000492973 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
TPR-208ENST00000492973 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
TPR-208ENST00000492973 UCN2Q96RP3 112 aa10.52□□□□□ -0.73
TPR-208ENST00000492973 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
TPR-208ENST00000492973 CYLDQ9NQC7 956 aa10.52□□□□□ -0.73
TPR-208ENST00000492973 TSPOAP1O95153 1857 aa10.51□□□□□ -0.73
TPR-208ENST00000492973 SCTRP47872 440 aa10.51□□□□□ -0.73
TPR-208ENST00000492973 MRPL14Q6P1L8 145 aaKnown RBP10.51□□□□□ -0.73
TPR-208ENST00000492973 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
TPR-208ENST00000492973 ARHGAP5Q13017 1502 aa10.51□□□□□ -0.73
TPR-208ENST00000492973 ZNF644Q9H582 1327 aaPredicted RBP10.51□□□□□ -0.73
TPR-208ENST00000492973 CC2D2BQ6DHV5 1058 aa10.5□□□□□ -0.73
TPR-208ENST00000492973 PLPP7Q8NBV4 271 aa10.5□□□□□ -0.73
TPR-208ENST00000492973 TRIM52Q96A61 297 aa10.5□□□□□ -0.73
TPR-208ENST00000492973 DOLKQ9UPQ8 538 aa10.5□□□□□ -0.73
TPR-208ENST00000492973 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
TPR-208ENST00000492973 MYOM3Q5VTT5 1437 aa10.5□□□□□ -0.73
TPR-208ENST00000492973 SCAPERQ9BY12 1400 aa10.5□□□□□ -0.73
TPR-208ENST00000492973 PREX2Q70Z35 1606 aa10.49□□□□□ -0.73
TPR-208ENST00000492973 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
TPR-208ENST00000492973 MAP7D1Q3KQU3 841 aa10.49□□□□□ -0.73
TPR-208ENST00000492973 ADGRL1O94910 1474 aa10.49□□□□□ -0.73
TPR-208ENST00000492973 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
TPR-208ENST00000492973 ADH1AP07327 375 aa10.48□□□□□ -0.73
TPR-208ENST00000492973 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
TPR-208ENST00000492973 KDF1Q8NAX2 398 aaPredicted RBP10.48□□□□□ -0.73
TPR-208ENST00000492973 CALR3Q96L12 384 aaKnown RBP10.48□□□□□ -0.73
TPR-208ENST00000492973 DENND4BO75064 1496 aaPredicted RBP10.48□□□□□ -0.73
TPR-208ENST00000492973 MYO5CQ9NQX4 1742 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 HNRNPMP52272 730 aaKnown RBP eCLIP10.47□□□□□ -0.73
TPR-208ENST00000492973 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 TSEN34Q9BSV6 310 aaKnown RBP10.47□□□□□ -0.73
TPR-208ENST00000492973 OSBPL3Q9H4L5 887 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 GMPR2Q9P2T1 348 aaKnown RBP10.47□□□□□ -0.73
TPR-208ENST00000492973 MIA2Q96PC5 1412 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 KIAA1107Q9UPP5 1409 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 CDC42BPAQ5VT25 1732 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 CDC42BPBQ9Y5S2 1711 aa10.47□□□□□ -0.73
TPR-208ENST00000492973 SKIP12755 728 aa10.46□□□□□ -0.73
TPR-208ENST00000492973 TBC1D9Q6ZT07 1266 aa10.46□□□□□ -0.73
TPR-208ENST00000492973 AFAP1Q8N556 730 aa10.46□□□□□ -0.73
TPR-208ENST00000492973 AGBL1Q96MI9 1066 aa10.46□□□□□ -0.73
TPR-208ENST00000492973 POGZQ7Z3K3 1410 aa10.46□□□□□ -0.74
TPR-208ENST00000492973 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.74
TPR-208ENST00000492973 KDM6BO15054 1643 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 SAMD9LQ8IVG5 1584 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 ABCC1P33527 1531 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 FGD6Q6ZV73 1430 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 POTECB2RU33 542 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 SCARF1Q14162 830 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms