RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 ARFGEF1Q9Y6D6 1849 aa7.91□□□□□ -1.14
SEC13-219ENST00000492602 SBF1O95248 1867 aa7.9□□□□□ -1.14
SEC13-219ENST00000492602 BRCA1P38398 1863 aaKnown RBP7.9□□□□□ -1.14
SEC13-219ENST00000492602 UBR3Q6ZT12 1888 aa7.9□□□□□ -1.14
SEC13-219ENST00000492602 TAF1LQ8IZX4 1826 aa7.9□□□□□ -1.14
SEC13-219ENST00000492602 CHRNA5P30532 468 aa7.9□□□□□ -1.14
SEC13-219ENST00000492602 SOX10P56693 466 aa7.9□□□□□ -1.14
SEC13-219ENST00000492602 LINC00116Q8NCU8 138 aa7.9□□□□□ -1.14
SEC13-219ENST00000492602 SMARCC1Q92922 1105 aaPredicted RBP7.9□□□□□ -1.14
SEC13-219ENST00000492602 ZNF219Q9P2Y4 722 aaPredicted RBP7.9□□□□□ -1.14
SEC13-219ENST00000492602 VIRMAQ69YN4 1812 aaKnown RBP7.89□□□□□ -1.15
SEC13-219ENST00000492602 KDM6AO15550 1401 aaPredicted RBP7.89□□□□□ -1.15
SEC13-219ENST00000492602 TTC21AQ8NDW8 1320 aa7.89□□□□□ -1.15
SEC13-219ENST00000492602 RASSF10A6NK89 507 aa7.89□□□□□ -1.15
SEC13-219ENST00000492602 DGKZQ13574 1117 aa7.89□□□□□ -1.15
SEC13-219ENST00000492602 TRAPPC3LQ5T215 181 aa7.89□□□□□ -1.15
SEC13-219ENST00000492602 ZNF692Q9BU19 519 aaPredicted RBP7.89□□□□□ -1.15
SEC13-219ENST00000492602 GRM1Q13255 1194 aa7.88□□□□□ -1.15
SEC13-219ENST00000492602 PAXIP1Q6ZW49 1069 aaPredicted RBP7.88□□□□□ -1.15
SEC13-219ENST00000492602 PPARGC1BQ86YN6 1023 aaKnown RBP7.88□□□□□ -1.15
SEC13-219ENST00000492602 GCC1Q96CN9 775 aa7.88□□□□□ -1.15
SEC13-219ENST00000492602 ABT1Q9ULW3 272 aaKnown RBP7.88□□□□□ -1.15
SEC13-219ENST00000492602 LOC102724428A0A0B4J2F2 783 aa7.87□□□□□ -1.15
SEC13-219ENST00000492602 DLL1O00548 723 aa7.87□□□□□ -1.15
SEC13-219ENST00000492602 SIK1P57059 783 aa7.87□□□□□ -1.15
SEC13-219ENST00000492602 LDHDQ86WU2 507 aa7.87□□□□□ -1.15
SEC13-219ENST00000492602 ITGBL1O95965 494 aaPredicted RBP7.86□□□□□ -1.15
SEC13-219ENST00000492602 GYS1P13807 737 aa7.86□□□□□ -1.15
SEC13-219ENST00000492602 ATP6V1AP38606 617 aa7.86□□□□□ -1.15
SEC13-219ENST00000492602 HABP4Q5JVS0 413 aaKnown RBP7.86□□□□□ -1.15
SEC13-219ENST00000492602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.86□□□□□ -1.15
SEC13-219ENST00000492602 RTCBQ9Y3I0 505 aaKnown RBP7.86□□□□□ -1.15
SEC13-219ENST00000492602 C4AP0C0L4 1744 aa7.86□□□□□ -1.15
SEC13-219ENST00000492602 MEGF6O75095 1541 aa7.85□□□□□ -1.15
SEC13-219ENST00000492602 DDNO94850 711 aaPredicted RBP7.85□□□□□ -1.15
SEC13-219ENST00000492602 RFC4P35249 363 aa7.85□□□□□ -1.15
SEC13-219ENST00000492602 ITPK1Q13572 414 aa7.85□□□□□ -1.15
SEC13-219ENST00000492602 ERFEQ4G0M1 354 aa7.85□□□□□ -1.15
SEC13-219ENST00000492602 IP6K1Q92551 441 aa7.85□□□□□ -1.15
SEC13-219ENST00000492602 ARHGEF1Q92888 912 aaKnown RBP7.85□□□□□ -1.15
SEC13-219ENST00000492602 GPR101Q96P66 508 aaPredicted RBP7.85□□□□□ -1.15
SEC13-219ENST00000492602 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
SEC13-219ENST00000492602 CENPJQ9HC77 1338 aaPredicted RBP7.84□□□□□ -1.15
SEC13-219ENST00000492602 IQCA1LA6NCM1 817 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 NFKBIEO00221 500 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 ECE1P42892 770 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 NBPF1Q3BBV0 1214 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 EAPPQ56P03 285 aaPredicted RBP7.84□□□□□ -1.15
SEC13-219ENST00000492602 CYP4F22Q6NT55 531 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 PIGBQ92521 554 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 CAPNS2Q96L46 248 aa7.84□□□□□ -1.15
SEC13-219ENST00000492602 KTN1Q86UP2 1357 aaKnown RBP7.84□□□□□ -1.16
SEC13-219ENST00000492602 TIAM2Q8IVF5 1701 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 NME9Q86XW9 330 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 NBPF15Q8N660 670 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 RAPGEF4Q8WZA2 1011 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 STAC3Q96MF2 364 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 TAF1DQ9H5J8 278 aaPredicted RBP7.83□□□□□ -1.16
SEC13-219ENST00000492602 LTN1O94822 1766 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 USP31Q70CQ4 1352 aa7.83□□□□□ -1.16
SEC13-219ENST00000492602 PCDH11XQ9BZA7 1347 aa7.82□□□□□ -1.16
SEC13-219ENST00000492602 PCDH11YQ9BZA8 1340 aa7.82□□□□□ -1.16
SEC13-219ENST00000492602 MAP1SQ66K74 1059 aaPredicted RBP7.82□□□□□ -1.16
SEC13-219ENST00000492602 CNTROBQ8N137 903 aa7.82□□□□□ -1.16
SEC13-219ENST00000492602 USHBP1Q8N6Y0 703 aa7.82□□□□□ -1.16
SEC13-219ENST00000492602 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
SEC13-219ENST00000492602 CGNL1Q0VF96 1302 aa7.81□□□□□ -1.16
SEC13-219ENST00000492602 CA12O43570 354 aa7.81□□□□□ -1.16
SEC13-219ENST00000492602 AOC2O75106 756 aa7.81□□□□□ -1.16
SEC13-219ENST00000492602 TATP17735 454 aaPredicted RBP7.81□□□□□ -1.16
SEC13-219ENST00000492602 DDR1Q08345 913 aa7.81□□□□□ -1.16
SEC13-219ENST00000492602 TTLL6Q8N841 843 aa7.81□□□□□ -1.16
SEC13-219ENST00000492602 ASAP1Q9ULH1 1129 aa7.81□□□□□ -1.16
SEC13-219ENST00000492602 EVC2Q86UK5 1308 aa7.8□□□□□ -1.16
SEC13-219ENST00000492602 CYP27B1O15528 508 aa7.8□□□□□ -1.16
SEC13-219ENST00000492602 MAP2K2P36507 400 aa7.8□□□□□ -1.16
SEC13-219ENST00000492602 FKBP8Q14318 412 aa7.8□□□□□ -1.16
SEC13-219ENST00000492602 NBPF6Q5VWK0 638 aa7.8□□□□□ -1.16
SEC13-219ENST00000492602 NBPF4Q96M43 638 aa7.8□□□□□ -1.16
SEC13-219ENST00000492602 FAM208AQ9UK61 1670 aaKnown RBP7.79□□□□□ -1.16
SEC13-219ENST00000492602 CCDC88AQ3V6T2 1871 aa7.79□□□□□ -1.16
SEC13-219ENST00000492602 HOXC9P31274 260 aa7.79□□□□□ -1.16
SEC13-219ENST00000492602 AMPHP49418 695 aa7.79□□□□□ -1.16
SEC13-219ENST00000492602 FXR1P51114 621 aaKnown RBP eCLIP7.79□□□□□ -1.16
SEC13-219ENST00000492602 DDX21Q9NR30 783 aaKnown RBP eCLIP7.79□□□□□ -1.16
SEC13-219ENST00000492602 TMOD3Q9NYL9 352 aa7.79□□□□□ -1.16
SEC13-219ENST00000492602 SRP68Q9UHB9 627 aaKnown RBP7.79□□□□□ -1.16
SEC13-219ENST00000492602 LTBP1Q14766 1721 aa7.78□□□□□ -1.16
SEC13-219ENST00000492602 MAP2P11137 1827 aaKnown RBP7.78□□□□□ -1.16
SEC13-219ENST00000492602 POLRMTO00411 1230 aaKnown RBP7.78□□□□□ -1.16
SEC13-219ENST00000492602 RPS6KA4O75676 772 aa7.78□□□□□ -1.16
SEC13-219ENST00000492602 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
SEC13-219ENST00000492602 L3MBTL3Q96JM7 780 aaPredicted RBP7.78□□□□□ -1.16
SEC13-219ENST00000492602 CD163L1Q9NR16 1453 aa7.78□□□□□ -1.16
SEC13-219ENST00000492602 THSD7BQ9C0I4 1608 aa7.78□□□□□ -1.16
SEC13-219ENST00000492602 C21orf2O43822 256 aa7.77□□□□□ -1.17
SEC13-219ENST00000492602 EPHX2P34913 555 aa7.77□□□□□ -1.17
SEC13-219ENST00000492602 FMR1Q06787 632 aaKnown RBP eCLIP7.77□□□□□ -1.17
SEC13-219ENST00000492602 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
SEC13-219ENST00000492602 PNMA8AQ86V59 439 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms