RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 ITGB4P16144 1822 aa17.71■□□□□ 0.43
PTPRE-210ENST00000492479 DDB1Q16531 1140 aa17.71■□□□□ 0.43
PTPRE-210ENST00000492479 TSPYL4Q9UJ04 414 aa17.71■□□□□ 0.43
PTPRE-210ENST00000492479 CACNA1FO60840 1977 aa17.7■□□□□ 0.42
PTPRE-210ENST00000492479 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
PTPRE-210ENST00000492479 HOXB7P09629 217 aa17.69■□□□□ 0.42
PTPRE-210ENST00000492479 RARSP54136 660 aaKnown RBP17.69■□□□□ 0.42
PTPRE-210ENST00000492479 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
PTPRE-210ENST00000492479 CCDC9Q9Y3X0 531 aaKnown RBP17.69■□□□□ 0.42
PTPRE-210ENST00000492479 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
PTPRE-210ENST00000492479 VAMP4O75379 141 aa17.68■□□□□ 0.42
PTPRE-210ENST00000492479 ALDH1L2Q3SY69 923 aa17.68■□□□□ 0.42
PTPRE-210ENST00000492479 DOT1LQ8TEK3 1739 aa17.68■□□□□ 0.42
PTPRE-210ENST00000492479 BTBD11A6QL63 1104 aa17.67■□□□□ 0.42
PTPRE-210ENST00000492479 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
PTPRE-210ENST00000492479 C8orf58Q8NAV2 365 aa17.67■□□□□ 0.42
PTPRE-210ENST00000492479 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
PTPRE-210ENST00000492479 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
PTPRE-210ENST00000492479 MARCH10Q8NA82 808 aaPredicted RBP17.66■□□□□ 0.42
PTPRE-210ENST00000492479 QTRT2Q9H974 415 aaKnown RBP17.66■□□□□ 0.42
PTPRE-210ENST00000492479 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
PTPRE-210ENST00000492479 TWISTNBQ3B726 338 aaPredicted RBP17.65■□□□□ 0.42
PTPRE-210ENST00000492479 TSPYL6Q8N831 410 aa17.65■□□□□ 0.42
PTPRE-210ENST00000492479 NFATC2IPQ8NCF5 419 aa17.65■□□□□ 0.42
PTPRE-210ENST00000492479 MIS18AQ9NYP9 233 aa17.65■□□□□ 0.42
PTPRE-210ENST00000492479 KCPQ6ZWJ8 1503 aa17.64■□□□□ 0.41
PTPRE-210ENST00000492479 RRP1P56182 461 aaKnown RBP17.64■□□□□ 0.41
PTPRE-210ENST00000492479 CABP4P57796 275 aa17.64■□□□□ 0.41
PTPRE-210ENST00000492479 ZNF790Q6PG37 636 aa17.64■□□□□ 0.41
PTPRE-210ENST00000492479 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
PTPRE-210ENST00000492479 CICQ96RK0 1608 aaPredicted RBP17.64■□□□□ 0.41
PTPRE-210ENST00000492479 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
PTPRE-210ENST00000492479 NHSQ6T4R5 1651 aa17.62■□□□□ 0.41
PTPRE-210ENST00000492479 RBM6P78332 1123 aaKnown RBP17.61■□□□□ 0.41
PTPRE-210ENST00000492479 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
PTPRE-210ENST00000492479 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
PTPRE-210ENST00000492479 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
PTPRE-210ENST00000492479 KCNQ3O43525 872 aa17.6■□□□□ 0.41
PTPRE-210ENST00000492479 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
PTPRE-210ENST00000492479 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.6■□□□□ 0.41
PTPRE-210ENST00000492479 TMOD3Q9NYL9 352 aa17.6■□□□□ 0.41
PTPRE-210ENST00000492479 KIF16BQ96L93 1317 aa17.6■□□□□ 0.41
PTPRE-210ENST00000492479 C5P01031 1676 aa17.6■□□□□ 0.41
PTPRE-210ENST00000492479 BRWD3Q6RI45 1802 aa17.59■□□□□ 0.41
PTPRE-210ENST00000492479 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
PTPRE-210ENST00000492479 BCAR3O75815 825 aa17.59■□□□□ 0.41
PTPRE-210ENST00000492479 ERICH6BQ5W0A0 696 aa17.59■□□□□ 0.41
PTPRE-210ENST00000492479 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
PTPRE-210ENST00000492479 MRPL50Q8N5N7 158 aaKnown RBP17.58■□□□□ 0.4
PTPRE-210ENST00000492479 PIGBQ92521 554 aa17.58■□□□□ 0.4
PTPRE-210ENST00000492479 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.4
PTPRE-210ENST00000492479 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
PTPRE-210ENST00000492479 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
PTPRE-210ENST00000492479 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
PTPRE-210ENST00000492479 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
PTPRE-210ENST00000492479 RGS17Q9UGC6 210 aaPredicted RBP17.57■□□□□ 0.4
PTPRE-210ENST00000492479 SLC39A6Q13433 755 aa17.56■□□□□ 0.4
PTPRE-210ENST00000492479 PDE3AQ14432 1141 aa17.56■□□□□ 0.4
PTPRE-210ENST00000492479 CCDC30Q5VVM6 783 aa17.56■□□□□ 0.4
PTPRE-210ENST00000492479 ZNF496Q96IT1 587 aaPredicted RBP17.56■□□□□ 0.4
PTPRE-210ENST00000492479 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
PTPRE-210ENST00000492479 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
PTPRE-210ENST00000492479 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
PTPRE-210ENST00000492479 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
PTPRE-210ENST00000492479 NEFLP07196 543 aa17.54■□□□□ 0.4
PTPRE-210ENST00000492479 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
PTPRE-210ENST00000492479 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
PTPRE-210ENST00000492479 IPO8O15397 1037 aaKnown RBP17.53■□□□□ 0.4
PTPRE-210ENST00000492479 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
PTPRE-210ENST00000492479 BTAF1O14981 1849 aa17.53■□□□□ 0.4
PTPRE-210ENST00000492479 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
PTPRE-210ENST00000492479 TJP1Q07157 1748 aa17.52■□□□□ 0.4
PTPRE-210ENST00000492479 PTPRCP08575 1304 aa17.52■□□□□ 0.4
PTPRE-210ENST00000492479 MS4A1P11836 297 aa17.52■□□□□ 0.4
PTPRE-210ENST00000492479 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
PTPRE-210ENST00000492479 RGS12O14924 1447 aa17.52■□□□□ 0.4
PTPRE-210ENST00000492479 RXRBP28702 533 aa17.51■□□□□ 0.39
PTPRE-210ENST00000492479 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
PTPRE-210ENST00000492479 BCL2L13Q9BXK5 485 aa17.51■□□□□ 0.39
PTPRE-210ENST00000492479 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
PTPRE-210ENST00000492479 ASAP1Q9ULH1 1129 aa17.51■□□□□ 0.39
PTPRE-210ENST00000492479 A0A0G2JS52 829 aa17.5■□□□□ 0.39
PTPRE-210ENST00000492479 MYT1Q01538 1121 aa17.5■□□□□ 0.39
PTPRE-210ENST00000492479 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
PTPRE-210ENST00000492479 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
PTPRE-210ENST00000492479 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
PTPRE-210ENST00000492479 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
PTPRE-210ENST00000492479 RREB1Q92766 1687 aa17.5■□□□□ 0.39
PTPRE-210ENST00000492479 LY75O60449 1722 aa17.5■□□□□ 0.39
PTPRE-210ENST00000492479 PLIN1O60240 522 aa17.49■□□□□ 0.39
PTPRE-210ENST00000492479 TRIM27P14373 513 aa17.49■□□□□ 0.39
PTPRE-210ENST00000492479 FAM196AQ6ZSG2 479 aa17.49■□□□□ 0.39
PTPRE-210ENST00000492479 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
PTPRE-210ENST00000492479 ABCC4O15439 1325 aa17.48■□□□□ 0.39
PTPRE-210ENST00000492479 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
PTPRE-210ENST00000492479 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
PTPRE-210ENST00000492479 PDIA6Q15084 440 aa17.48■□□□□ 0.39
PTPRE-210ENST00000492479 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
PTPRE-210ENST00000492479 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
PTPRE-210ENST00000492479 DDX21Q9NR30 783 aaKnown RBP eCLIP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms