RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.99□□□□□ -0.17
EPHB4-208ENST00000492403 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
EPHB4-208ENST00000492403 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
EPHB4-208ENST00000492403 ROCK2O75116 1388 aaKnown RBP13.98□□□□□ -0.17
EPHB4-208ENST00000492403 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
EPHB4-208ENST00000492403 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
EPHB4-208ENST00000492403 MYSM1Q5VVJ2 828 aa13.98□□□□□ -0.17
EPHB4-208ENST00000492403 RETREG2Q8NC44 543 aa13.98□□□□□ -0.17
EPHB4-208ENST00000492403 POLR3AO14802 1390 aaPredicted RBP13.97□□□□□ -0.17
EPHB4-208ENST00000492403 SPATA31A5Q5VU36 1347 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 SPATA31A7Q8IWB4 1347 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 CLK2P49760 499 aaKnown RBP13.97□□□□□ -0.17
EPHB4-208ENST00000492403 PDE3BQ13370 1112 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 TMEM92Q6UXU6 159 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 BANK1Q8NDB2 785 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 EPAS1Q99814 870 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 NRAPQ86VF7 1730 aa13.97□□□□□ -0.17
EPHB4-208ENST00000492403 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
EPHB4-208ENST00000492403 DEFB132Q7Z7B7 95 aa13.96□□□□□ -0.17
EPHB4-208ENST00000492403 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
EPHB4-208ENST00000492403 CABP1Q9NZU7 370 aa13.96□□□□□ -0.17
EPHB4-208ENST00000492403 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.18
EPHB4-208ENST00000492403 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
EPHB4-208ENST00000492403 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
EPHB4-208ENST00000492403 GALR2O43603 387 aaPredicted RBP13.95□□□□□ -0.18
EPHB4-208ENST00000492403 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
EPHB4-208ENST00000492403 PHF14O94880 888 aa13.94□□□□□ -0.18
EPHB4-208ENST00000492403 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
EPHB4-208ENST00000492403 SPATA31A1Q5TZJ5 1347 aa13.93□□□□□ -0.18
EPHB4-208ENST00000492403 GCP02774 474 aa13.93□□□□□ -0.18
EPHB4-208ENST00000492403 RFC5P40937 340 aa13.93□□□□□ -0.18
EPHB4-208ENST00000492403 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
EPHB4-208ENST00000492403 IER5LQ5T953 404 aa13.93□□□□□ -0.18
EPHB4-208ENST00000492403 FAM196AQ6ZSG2 479 aa13.93□□□□□ -0.18
EPHB4-208ENST00000492403 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
EPHB4-208ENST00000492403 OATP04181 439 aa13.92□□□□□ -0.18
EPHB4-208ENST00000492403 PLCG2P16885 1265 aa13.92□□□□□ -0.18
EPHB4-208ENST00000492403 FAM182BQ5T319 152 aa13.92□□□□□ -0.18
EPHB4-208ENST00000492403 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
EPHB4-208ENST00000492403 RGPD1P0DJD0 1748 aa13.92□□□□□ -0.18
EPHB4-208ENST00000492403 TRPM1Q7Z4N2 1603 aa13.91□□□□□ -0.18
EPHB4-208ENST00000492403 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
EPHB4-208ENST00000492403 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
EPHB4-208ENST00000492403 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
EPHB4-208ENST00000492403 PTCD2Q8WV60 388 aaKnown RBP13.91□□□□□ -0.18
EPHB4-208ENST00000492403 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
EPHB4-208ENST00000492403 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
EPHB4-208ENST00000492403 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
EPHB4-208ENST00000492403 TMCO4Q5TGY1 634 aa13.9□□□□□ -0.18
EPHB4-208ENST00000492403 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
EPHB4-208ENST00000492403 THRAP3Q9Y2W1 955 aaKnown RBP13.9□□□□□ -0.18
EPHB4-208ENST00000492403 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
EPHB4-208ENST00000492403 CPDO75976 1380 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 C11orf95C9JLR9 678 aaPredicted RBP13.89□□□□□ -0.19
EPHB4-208ENST00000492403 CSB-PGBD3P0DP91 1061 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
EPHB4-208ENST00000492403 TMEM259Q4ZIN3 620 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 LARP1Q6PKG0 1096 aaKnown RBP13.89□□□□□ -0.19
EPHB4-208ENST00000492403 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 WWC1Q8IX03 1113 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
EPHB4-208ENST00000492403 TBC1D2Q9BYX2 928 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 USP6P35125 1406 aa13.89□□□□□ -0.19
EPHB4-208ENST00000492403 TRIM37O94972 964 aa13.88□□□□□ -0.19
EPHB4-208ENST00000492403 APBA3O96018 575 aa13.88□□□□□ -0.19
EPHB4-208ENST00000492403 DIXDC1Q155Q3 683 aa13.88□□□□□ -0.19
EPHB4-208ENST00000492403 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
EPHB4-208ENST00000492403 USP19O94966 1318 aa13.88□□□□□ -0.19
EPHB4-208ENST00000492403 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
EPHB4-208ENST00000492403 HDGFL2Q7Z4V5 671 aaPredicted RBP13.87□□□□□ -0.19
EPHB4-208ENST00000492403 TTC21AQ8NDW8 1320 aa13.87□□□□□ -0.19
EPHB4-208ENST00000492403 KTN1Q86UP2 1357 aaKnown RBP13.86□□□□□ -0.19
EPHB4-208ENST00000492403 PSDA5PKW4 1024 aaPredicted RBP13.86□□□□□ -0.19
EPHB4-208ENST00000492403 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
EPHB4-208ENST00000492403 SLAIN1Q8ND83 568 aa13.86□□□□□ -0.19
EPHB4-208ENST00000492403 GZF1Q9H116 711 aaPredicted RBP13.86□□□□□ -0.19
EPHB4-208ENST00000492403 THSD7AQ9UPZ6 1657 aa13.85□□□□□ -0.19
EPHB4-208ENST00000492403 IRF5Q13568 498 aa13.85□□□□□ -0.19
EPHB4-208ENST00000492403 GDPD2Q9HCC8 539 aa13.85□□□□□ -0.19
EPHB4-208ENST00000492403 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
EPHB4-208ENST00000492403 CAMTA1Q9Y6Y1 1673 aa13.85□□□□□ -0.19
EPHB4-208ENST00000492403 EP400Q96L91 3159 aa13.84□□□□□ -0.19
EPHB4-208ENST00000492403 CRB1P82279 1406 aa13.84□□□□□ -0.19
EPHB4-208ENST00000492403 DDB1Q16531 1140 aa13.84□□□□□ -0.19
EPHB4-208ENST00000492403 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
EPHB4-208ENST00000492403 PXYLP1Q8TE99 480 aa13.84□□□□□ -0.19
EPHB4-208ENST00000492403 CALR3Q96L12 384 aaKnown RBP13.84□□□□□ -0.19
EPHB4-208ENST00000492403 PCDHGA10Q9Y5H3 936 aa13.84□□□□□ -0.19
EPHB4-208ENST00000492403 AATKQ6ZMQ8 1374 aa13.83□□□□□ -0.19
EPHB4-208ENST00000492403 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
EPHB4-208ENST00000492403 EZH2Q15910 746 aaKnown RBP13.83□□□□□ -0.2
EPHB4-208ENST00000492403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.83□□□□□ -0.2
EPHB4-208ENST00000492403 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
EPHB4-208ENST00000492403 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
EPHB4-208ENST00000492403 PDE4CQ08493 712 aa13.82□□□□□ -0.2
EPHB4-208ENST00000492403 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
EPHB4-208ENST00000492403 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
EPHB4-208ENST00000492403 ADGRG1Q9Y653 693 aa13.82□□□□□ -0.2
EPHB4-208ENST00000492403 PARD3Q8TEW0 1356 aa13.82□□□□□ -0.2
EPHB4-208ENST00000492403 COL5A2P05997 1499 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms