RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 KIF3CO14782 793 aa9.67□□□□□ -0.86
VPS45-209ENST00000491789 MYT1Q01538 1121 aa9.67□□□□□ -0.86
VPS45-209ENST00000491789 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
VPS45-209ENST00000491789 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
VPS45-209ENST00000491789 LMO7Q8WWI1 1683 aa9.67□□□□□ -0.86
VPS45-209ENST00000491789 NRKQ7Z2Y5 1582 aa9.67□□□□□ -0.86
VPS45-209ENST00000491789 EN1Q05925 392 aaPredicted RBP9.66□□□□□ -0.86
VPS45-209ENST00000491789 SF3B2Q13435 895 aaKnown RBP9.66□□□□□ -0.86
VPS45-209ENST00000491789 VARS2Q5ST30 1063 aaKnown RBP9.66□□□□□ -0.86
VPS45-209ENST00000491789 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
VPS45-209ENST00000491789 STRN4Q9NRL3 753 aa9.66□□□□□ -0.86
VPS45-209ENST00000491789 PPP4R2Q9NY27 417 aa9.66□□□□□ -0.86
VPS45-209ENST00000491789 PPIP5K1Q6PFW1 1433 aa9.65□□□□□ -0.86
VPS45-209ENST00000491789 COL18A1P39060 1754 aa9.65□□□□□ -0.86
VPS45-209ENST00000491789 A0A1W2PP64 1363 aa9.65□□□□□ -0.86
VPS45-209ENST00000491789 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
VPS45-209ENST00000491789 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
VPS45-209ENST00000491789 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
VPS45-209ENST00000491789 AKAP12Q02952 1782 aa9.65□□□□□ -0.87
VPS45-209ENST00000491789 USP19O94966 1318 aa9.64□□□□□ -0.87
VPS45-209ENST00000491789 GCP02774 474 aa9.64□□□□□ -0.87
VPS45-209ENST00000491789 LARP1Q6PKG0 1096 aaKnown RBP9.64□□□□□ -0.87
VPS45-209ENST00000491789 USP35Q9P2H5 1018 aa9.64□□□□□ -0.87
VPS45-209ENST00000491789 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
VPS45-209ENST00000491789 EDC4Q6P2E9 1401 aaKnown RBP9.64□□□□□ -0.87
VPS45-209ENST00000491789 SRCAPQ6ZRS2 3230 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 SBF2Q86WG5 1849 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 PSDA5PKW4 1024 aaPredicted RBP9.63□□□□□ -0.87
VPS45-209ENST00000491789 BAG6P46379 1132 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 EVA1CP58658 441 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 EZH2Q15910 746 aaKnown RBP9.63□□□□□ -0.87
VPS45-209ENST00000491789 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 SSH2Q76I76 1423 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 CPDO75976 1380 aa9.63□□□□□ -0.87
VPS45-209ENST00000491789 PIK3C2AO00443 1686 aa9.62□□□□□ -0.87
VPS45-209ENST00000491789 KIF20BQ96Q89 1820 aa9.62□□□□□ -0.87
VPS45-209ENST00000491789 TRIM37O94972 964 aa9.62□□□□□ -0.87
VPS45-209ENST00000491789 PTGER2P43116 358 aa9.62□□□□□ -0.87
VPS45-209ENST00000491789 BARGINQ6ZT62 677 aa9.62□□□□□ -0.87
VPS45-209ENST00000491789 USP6P35125 1406 aa9.62□□□□□ -0.87
VPS45-209ENST00000491789 PARP4Q9UKK3 1724 aaKnown RBP9.62□□□□□ -0.87
VPS45-209ENST00000491789 ZNF521Q96K83 1311 aa9.61□□□□□ -0.87
VPS45-209ENST00000491789 CAMKK2Q96RR4 588 aa9.61□□□□□ -0.87
VPS45-209ENST00000491789 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
VPS45-209ENST00000491789 RCAN3Q9UKA8 241 aa9.61□□□□□ -0.87
VPS45-209ENST00000491789 CPSF1Q10570 1443 aaKnown RBP9.61□□□□□ -0.87
VPS45-209ENST00000491789 SLIT3O75094 1523 aa9.61□□□□□ -0.87
VPS45-209ENST00000491789 LRP5O75197 1615 aa9.6□□□□□ -0.87
VPS45-209ENST00000491789 DISP2A7MBM2 1401 aa9.6□□□□□ -0.87
VPS45-209ENST00000491789 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
VPS45-209ENST00000491789 TCP11L2Q8N4U5 519 aa9.6□□□□□ -0.87
VPS45-209ENST00000491789 PNNQ9H307 717 aaKnown RBP9.6□□□□□ -0.87
VPS45-209ENST00000491789 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
VPS45-209ENST00000491789 RREB1Q92766 1687 aa9.6□□□□□ -0.87
VPS45-209ENST00000491789 COL5A2P05997 1499 aaPredicted RBP9.59□□□□□ -0.87
VPS45-209ENST00000491789 WNK3Q9BYP7 1800 aa9.59□□□□□ -0.87
VPS45-209ENST00000491789 NUDT7P0C024 238 aa9.59□□□□□ -0.87
VPS45-209ENST00000491789 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
VPS45-209ENST00000491789 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS45-209ENST00000491789 RUNDC1Q96C34 613 aa9.59□□□□□ -0.87
VPS45-209ENST00000491789 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
VPS45-209ENST00000491789 MON2Q7Z3U7 1717 aa9.59□□□□□ -0.87
VPS45-209ENST00000491789 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
VPS45-209ENST00000491789 ZBTB7CA1YPR0 619 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 E9PSI1 815 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 SLC34A2O95436 690 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 APBA3O96018 575 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 FOXK1P85037 733 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 R3HDM1Q15032 1099 aaKnown RBP9.58□□□□□ -0.88
VPS45-209ENST00000491789 CCDC27Q2M243 656 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 PLPP6Q8IY26 295 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.58□□□□□ -0.88
VPS45-209ENST00000491789 THRAP3Q9Y2W1 955 aaKnown RBP9.58□□□□□ -0.88
VPS45-209ENST00000491789 PCDHGA4Q9Y5G9 962 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
VPS45-209ENST00000491789 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
VPS45-209ENST00000491789 TTC21BQ7Z4L5 1316 aa9.57□□□□□ -0.88
VPS45-209ENST00000491789 CRB1P82279 1406 aa9.57□□□□□ -0.88
VPS45-209ENST00000491789 TBC1D12O60347 775 aa9.57□□□□□ -0.88
VPS45-209ENST00000491789 MTHFSP49914 203 aa9.57□□□□□ -0.88
VPS45-209ENST00000491789 LRRC37A3O60309 1634 aa9.56□□□□□ -0.88
VPS45-209ENST00000491789 FYB1O15117 783 aa9.56□□□□□ -0.88
VPS45-209ENST00000491789 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
VPS45-209ENST00000491789 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
VPS45-209ENST00000491789 LTN1O94822 1766 aa9.55□□□□□ -0.88
VPS45-209ENST00000491789 GTPBP6O43824 516 aaPredicted RBP9.55□□□□□ -0.88
VPS45-209ENST00000491789 SLFN5Q08AF3 891 aa9.55□□□□□ -0.88
VPS45-209ENST00000491789 DSG2Q14126 1118 aa9.55□□□□□ -0.88
VPS45-209ENST00000491789 WDR63Q8IWG1 891 aa9.55□□□□□ -0.88
VPS45-209ENST00000491789 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
VPS45-209ENST00000491789 ZNF687Q8N1G0 1237 aa9.55□□□□□ -0.88
VPS45-209ENST00000491789 APAF1O14727 1248 aa9.54□□□□□ -0.88
VPS45-209ENST00000491789 PDE4AP27815 886 aa9.54□□□□□ -0.88
VPS45-209ENST00000491789 DUSP27Q5VZP5 1158 aa9.54□□□□□ -0.88
VPS45-209ENST00000491789 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
VPS45-209ENST00000491789 USP54Q70EL1 1684 aa9.54□□□□□ -0.88
VPS45-209ENST00000491789 WDR17Q8IZU2 1322 aa9.54□□□□□ -0.88
VPS45-209ENST00000491789 NFAT5O94916 1531 aa9.53□□□□□ -0.88
VPS45-209ENST00000491789 KAT6BQ8WYB5 2073 aa9.53□□□□□ -0.88
VPS45-209ENST00000491789 NEFMP07197 916 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms