RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ATG3Q9NT62 314 aa11.68□□□□□ -0.54
APOBEC3F-204ENST00000491387 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
APOBEC3F-204ENST00000491387 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
APOBEC3F-204ENST00000491387 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3F-204ENST00000491387 KIF13BQ9NQT8 1826 aa11.67□□□□□ -0.54
APOBEC3F-204ENST00000491387 GNPATO15228 680 aa11.66□□□□□ -0.54
APOBEC3F-204ENST00000491387 PHF14O94880 888 aa11.66□□□□□ -0.54
APOBEC3F-204ENST00000491387 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-204ENST00000491387 DCAF5Q96JK2 942 aa11.66□□□□□ -0.54
APOBEC3F-204ENST00000491387 ADRA2BP18089 450 aa11.65□□□□□ -0.54
APOBEC3F-204ENST00000491387 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
APOBEC3F-204ENST00000491387 NLGN1Q8N2Q7 840 aa11.65□□□□□ -0.54
APOBEC3F-204ENST00000491387 SLC4A9Q96Q91 983 aa11.65□□□□□ -0.54
APOBEC3F-204ENST00000491387 GPBP1L1Q9HC44 474 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3F-204ENST00000491387 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
APOBEC3F-204ENST00000491387 TGFB2P61812 414 aa11.64□□□□□ -0.55
APOBEC3F-204ENST00000491387 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
APOBEC3F-204ENST00000491387 KIAA1551Q9HCM1 1747 aa11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 MMP10P09238 476 aa11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 PLEKHO1Q53GL0 409 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 TRAPPC3LQ5T215 181 aa11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 PXDNLA1KZ92 1463 aa11.63□□□□□ -0.55
APOBEC3F-204ENST00000491387 KDM6AO15550 1401 aaPredicted RBP11.62□□□□□ -0.55
APOBEC3F-204ENST00000491387 C10orf71Q711Q0 1435 aa11.62□□□□□ -0.55
APOBEC3F-204ENST00000491387 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
APOBEC3F-204ENST00000491387 HSPA6P17066 643 aa11.62□□□□□ -0.55
APOBEC3F-204ENST00000491387 MYH14Q7Z406 1995 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-204ENST00000491387 GYS1P13807 737 aa11.61□□□□□ -0.55
APOBEC3F-204ENST00000491387 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
APOBEC3F-204ENST00000491387 POLR3GLQ9BT43 218 aa11.61□□□□□ -0.55
APOBEC3F-204ENST00000491387 KIF3CO14782 793 aa11.6□□□□□ -0.55
APOBEC3F-204ENST00000491387 HSPA5P11021 654 aaKnown RBP11.6□□□□□ -0.55
APOBEC3F-204ENST00000491387 TNNT2P45379 298 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3F-204ENST00000491387 EIF4G2P78344 907 aaKnown RBP eCLIP11.6□□□□□ -0.55
APOBEC3F-204ENST00000491387 ZNF530Q6P9A1 599 aaPredicted RBP11.6□□□□□ -0.55
APOBEC3F-204ENST00000491387 PANK3Q9H999 370 aa11.6□□□□□ -0.55
APOBEC3F-204ENST00000491387 CABP4P57796 275 aa11.59□□□□□ -0.55
APOBEC3F-204ENST00000491387 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
APOBEC3F-204ENST00000491387 C4AP0C0L4 1744 aa11.59□□□□□ -0.55
APOBEC3F-204ENST00000491387 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
APOBEC3F-204ENST00000491387 RFC4P35249 363 aa11.58□□□□□ -0.56
APOBEC3F-204ENST00000491387 MTHFSP49914 203 aa11.58□□□□□ -0.56
APOBEC3F-204ENST00000491387 IFFO2Q5TF58 517 aa11.58□□□□□ -0.56
APOBEC3F-204ENST00000491387 CCDC87Q9NVE4 849 aa11.58□□□□□ -0.56
APOBEC3F-204ENST00000491387 N4BP2Q86UW6 1770 aaPredicted RBP11.57□□□□□ -0.56
APOBEC3F-204ENST00000491387 A0A0G2JLW4 131 aa11.57□□□□□ -0.56
APOBEC3F-204ENST00000491387 KCNA3P22001 575 aa11.57□□□□□ -0.56
APOBEC3F-204ENST00000491387 IL13P35225 146 aa11.57□□□□□ -0.56
APOBEC3F-204ENST00000491387 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
APOBEC3F-204ENST00000491387 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 DPEP1P16444 411 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 CRKLP46109 303 aaKnown RBP11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 C1orf141Q5JVX7 400 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 MORC1Q86VD1 984 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 NFATC2IPQ8NCF5 419 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 BCS1LQ9Y276 419 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 PARP3Q9Y6F1 533 aa11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 USP42Q9H9J4 1324 aaKnown RBP11.56□□□□□ -0.56
APOBEC3F-204ENST00000491387 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
APOBEC3F-204ENST00000491387 SCN11AQ9UI33 1791 aa11.55□□□□□ -0.56
APOBEC3F-204ENST00000491387 TOMM70O94826 608 aa11.55□□□□□ -0.56
APOBEC3F-204ENST00000491387 SULT6B1Q6IMI4 303 aa11.55□□□□□ -0.56
APOBEC3F-204ENST00000491387 TJP1Q07157 1748 aa11.55□□□□□ -0.56
APOBEC3F-204ENST00000491387 PTCD1O75127 700 aaKnown RBP11.54□□□□□ -0.56
APOBEC3F-204ENST00000491387 TM4SF1P30408 202 aa11.54□□□□□ -0.56
APOBEC3F-204ENST00000491387 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
APOBEC3F-204ENST00000491387 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3F-204ENST00000491387 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
APOBEC3F-204ENST00000491387 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
APOBEC3F-204ENST00000491387 MRC1P22897 1456 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 FCHSD2O94868 740 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 APLP1P51693 650 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 DDR1Q08345 913 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 FKBP8Q14318 412 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 ARHGAP27Q6ZUM4 889 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 PIM2Q9P1W9 311 aa11.53□□□□□ -0.56
APOBEC3F-204ENST00000491387 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
APOBEC3F-204ENST00000491387 POLRMTO00411 1230 aaKnown RBP11.51□□□□□ -0.57
APOBEC3F-204ENST00000491387 DALRD3Q5D0E6 543 aaKnown RBP11.51□□□□□ -0.57
APOBEC3F-204ENST00000491387 DNAJC5GQ8N7S2 189 aa11.51□□□□□ -0.57
APOBEC3F-204ENST00000491387 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
APOBEC3F-204ENST00000491387 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
APOBEC3F-204ENST00000491387 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 DNAJC10Q8IXB1 793 aa11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 NMRK2Q9NPI5 230 aa11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
APOBEC3F-204ENST00000491387 NRXN2Q9P2S2 1712 aa11.49□□□□□ -0.57
APOBEC3F-204ENST00000491387 SBF1O95248 1867 aa11.49□□□□□ -0.57
APOBEC3F-204ENST00000491387 PER1O15534 1290 aaPredicted RBP11.49□□□□□ -0.57
APOBEC3F-204ENST00000491387 ZPR1O75312 459 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms