RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 LRP5O75197 1615 aa15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 ERVV-2B6SEH9 535 aa15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 CABP4P57796 275 aa15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 DDX10Q13206 875 aaKnown RBP15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 TFCP2L1Q9NZI6 479 aa15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
SOX2-OT-212ENST00000491282 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
SOX2-OT-212ENST00000491282 ATG3Q9NT62 314 aa15.38■□□□□ 0.05
SOX2-OT-212ENST00000491282 PAPPAQ13219 1627 aa15.38■□□□□ 0.05
SOX2-OT-212ENST00000491282 ABCB7O75027 752 aa15.37■□□□□ 0.05
SOX2-OT-212ENST00000491282 MTHFSDQ2M296 383 aaKnown RBP15.37■□□□□ 0.05
SOX2-OT-212ENST00000491282 PPP1R1BQ9UD71 204 aaPredicted RBP15.37■□□□□ 0.05
SOX2-OT-212ENST00000491282 PNPLA7Q6ZV29 1317 aa15.37■□□□□ 0.05
SOX2-OT-212ENST00000491282 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
SOX2-OT-212ENST00000491282 SIK1P57059 783 aa15.36■□□□□ 0.05
SOX2-OT-212ENST00000491282 LY75O60449 1722 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 PTGER2P43116 358 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 AKAP4Q5JQC9 854 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 NFATC2IPQ8NCF5 419 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 LGR6Q9HBX8 967 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 ITGB4P16144 1822 aa15.35■□□□□ 0.05
SOX2-OT-212ENST00000491282 CASZ1Q86V15 1759 aa15.34■□□□□ 0.05
SOX2-OT-212ENST00000491282 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
SOX2-OT-212ENST00000491282 ITPK1Q13572 414 aa15.34■□□□□ 0.05
SOX2-OT-212ENST00000491282 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
SOX2-OT-212ENST00000491282 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.04
SOX2-OT-212ENST00000491282 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.04
SOX2-OT-212ENST00000491282 SMIM5Q71RC9 77 aa15.33■□□□□ 0.04
SOX2-OT-212ENST00000491282 COL23A1Q86Y22 540 aaPredicted RBP15.33■□□□□ 0.04
SOX2-OT-212ENST00000491282 LINC00116Q8NCU8 138 aa15.33■□□□□ 0.04
SOX2-OT-212ENST00000491282 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
SOX2-OT-212ENST00000491282 RNMTO43148 476 aaKnown RBP15.32■□□□□ 0.04
SOX2-OT-212ENST00000491282 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
SOX2-OT-212ENST00000491282 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
SOX2-OT-212ENST00000491282 SLC4A9Q96Q91 983 aa15.32■□□□□ 0.04
SOX2-OT-212ENST00000491282 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
SOX2-OT-212ENST00000491282 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
SOX2-OT-212ENST00000491282 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
SOX2-OT-212ENST00000491282 AK7Q96M32 723 aa15.31■□□□□ 0.04
SOX2-OT-212ENST00000491282 SLC16A10Q8TF71 515 aa15.3■□□□□ 0.04
SOX2-OT-212ENST00000491282 SGIP1Q9BQI5 828 aa15.3■□□□□ 0.04
SOX2-OT-212ENST00000491282 PHF14O94880 888 aa15.29■□□□□ 0.04
SOX2-OT-212ENST00000491282 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
SOX2-OT-212ENST00000491282 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
SOX2-OT-212ENST00000491282 SLC52A2Q9HAB3 445 aa15.29■□□□□ 0.04
SOX2-OT-212ENST00000491282 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
SOX2-OT-212ENST00000491282 RALBP1Q15311 655 aa15.28■□□□□ 0.04
SOX2-OT-212ENST00000491282 MSL1Q68DK7 614 aa15.28■□□□□ 0.04
SOX2-OT-212ENST00000491282 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 GNPATO15228 680 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 FCHSD2O94868 740 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 SLC39A6Q13433 755 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 IL17REQ8NFR9 667 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 ARXQ96QS3 562 aa15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 FHDC1Q9C0D6 1143 aaPredicted RBP15.27■□□□□ 0.04
SOX2-OT-212ENST00000491282 C5P01031 1676 aa15.26■□□□□ 0.03
SOX2-OT-212ENST00000491282 POLD1P28340 1107 aa15.26■□□□□ 0.03
SOX2-OT-212ENST00000491282 C4BP0C0L5 1744 aa15.26■□□□□ 0.03
SOX2-OT-212ENST00000491282 MAP3K5Q99683 1374 aa15.25■□□□□ 0.03
SOX2-OT-212ENST00000491282 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
SOX2-OT-212ENST00000491282 KLHL34Q8N239 644 aa15.24■□□□□ 0.03
SOX2-OT-212ENST00000491282 SYT17Q9BSW7 474 aa15.24■□□□□ 0.03
SOX2-OT-212ENST00000491282 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
SOX2-OT-212ENST00000491282 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
SOX2-OT-212ENST00000491282 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-212ENST00000491282 SSFA2P28290 1259 aa15.23■□□□□ 0.03
SOX2-OT-212ENST00000491282 TEFQ10587 303 aa15.23■□□□□ 0.03
SOX2-OT-212ENST00000491282 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
SOX2-OT-212ENST00000491282 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
SOX2-OT-212ENST00000491282 RC3H1Q5TC82 1133 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-212ENST00000491282 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-212ENST00000491282 QSER1Q2KHR3 1735 aa15.22■□□□□ 0.03
SOX2-OT-212ENST00000491282 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
SOX2-OT-212ENST00000491282 DSG3P32926 999 aa15.21■□□□□ 0.03
SOX2-OT-212ENST00000491282 CRKLP46109 303 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-212ENST00000491282 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
SOX2-OT-212ENST00000491282 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
SOX2-OT-212ENST00000491282 MCM10Q7L590 875 aa15.21■□□□□ 0.03
SOX2-OT-212ENST00000491282 MRC1P22897 1456 aa15.2■□□□□ 0.02
SOX2-OT-212ENST00000491282 MYBBP1AQ9BQG0 1328 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-212ENST00000491282 RPS6KA4O75676 772 aa15.2■□□□□ 0.02
SOX2-OT-212ENST00000491282 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-212ENST00000491282 ARHGEF1Q92888 912 aaKnown RBP15.2■□□□□ 0.02
SOX2-OT-212ENST00000491282 KCNQ3O43525 872 aa15.19■□□□□ 0.02
SOX2-OT-212ENST00000491282 NEFMP07197 916 aa15.19■□□□□ 0.02
SOX2-OT-212ENST00000491282 INTS5Q6P9B9 1019 aaKnown RBP15.19■□□□□ 0.02
SOX2-OT-212ENST00000491282 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
SOX2-OT-212ENST00000491282 PLEKHF1Q96S99 279 aa15.19■□□□□ 0.02
SOX2-OT-212ENST00000491282 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
SOX2-OT-212ENST00000491282 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-212ENST00000491282 PRKRIP1Q9H875 184 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-212ENST00000491282 CEMIPQ8WUJ3 1361 aa15.18■□□□□ 0.02
SOX2-OT-212ENST00000491282 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
SOX2-OT-212ENST00000491282 UBR3Q6ZT12 1888 aa15.17■□□□□ 0.02
SOX2-OT-212ENST00000491282 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
SOX2-OT-212ENST00000491282 CYP19A1P11511 503 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms