RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 PER1O15534 1290 aaPredicted RBP16.98■□□□□ 0.31
TMCO3-208ENST00000491166 HTRA3P83110 453 aa16.98■□□□□ 0.31
TMCO3-208ENST00000491166 MTHFSP49914 203 aa16.97■□□□□ 0.31
TMCO3-208ENST00000491166 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
TMCO3-208ENST00000491166 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
TMCO3-208ENST00000491166 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
TMCO3-208ENST00000491166 ITGB4P16144 1822 aa16.96■□□□□ 0.31
TMCO3-208ENST00000491166 IL13P35225 146 aa16.96■□□□□ 0.31
TMCO3-208ENST00000491166 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
TMCO3-208ENST00000491166 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.31
TMCO3-208ENST00000491166 ASAP1Q9ULH1 1129 aa16.96■□□□□ 0.31
TMCO3-208ENST00000491166 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
TMCO3-208ENST00000491166 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
TMCO3-208ENST00000491166 WDR90Q96KV7 1748 aa16.94■□□□□ 0.3
TMCO3-208ENST00000491166 AMIGO3Q86WK7 504 aa16.94■□□□□ 0.3
TMCO3-208ENST00000491166 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
TMCO3-208ENST00000491166 HMOX1P09601 288 aa16.93■□□□□ 0.3
TMCO3-208ENST00000491166 SIK1P57059 783 aa16.93■□□□□ 0.3
TMCO3-208ENST00000491166 C5P01031 1676 aa16.93■□□□□ 0.3
TMCO3-208ENST00000491166 PHF14O94880 888 aa16.92■□□□□ 0.3
TMCO3-208ENST00000491166 KLRG1Q96E93 195 aa16.92■□□□□ 0.3
TMCO3-208ENST00000491166 ATG3Q9NT62 314 aa16.92■□□□□ 0.3
TMCO3-208ENST00000491166 KDM6AO15550 1401 aaPredicted RBP16.92■□□□□ 0.3
TMCO3-208ENST00000491166 TOMM70O94826 608 aa16.91■□□□□ 0.3
TMCO3-208ENST00000491166 SLC34A2O95436 690 aa16.91■□□□□ 0.3
TMCO3-208ENST00000491166 ITPK1Q13572 414 aa16.91■□□□□ 0.3
TMCO3-208ENST00000491166 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
TMCO3-208ENST00000491166 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
TMCO3-208ENST00000491166 AK7Q96M32 723 aa16.91■□□□□ 0.3
TMCO3-208ENST00000491166 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
TMCO3-208ENST00000491166 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
TMCO3-208ENST00000491166 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
TMCO3-208ENST00000491166 CD2APQ9Y5K6 639 aa16.9■□□□□ 0.3
TMCO3-208ENST00000491166 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
TMCO3-208ENST00000491166 CABP4P57796 275 aa16.89■□□□□ 0.29
TMCO3-208ENST00000491166 C4BP0C0L5 1744 aa16.89■□□□□ 0.29
TMCO3-208ENST00000491166 KDRP35968 1356 aa16.89■□□□□ 0.29
TMCO3-208ENST00000491166 PCNTO95613 3336 aa16.88■□□□□ 0.29
TMCO3-208ENST00000491166 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
TMCO3-208ENST00000491166 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
TMCO3-208ENST00000491166 PLEKHG2Q9H7P9 1386 aa16.88■□□□□ 0.29
TMCO3-208ENST00000491166 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
TMCO3-208ENST00000491166 ERVV-2B6SEH9 535 aa16.87■□□□□ 0.29
TMCO3-208ENST00000491166 DIAPH1O60610 1272 aaKnown RBP16.87■□□□□ 0.29
TMCO3-208ENST00000491166 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
TMCO3-208ENST00000491166 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
TMCO3-208ENST00000491166 GNPATO15228 680 aa16.86■□□□□ 0.29
TMCO3-208ENST00000491166 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
TMCO3-208ENST00000491166 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
TMCO3-208ENST00000491166 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
TMCO3-208ENST00000491166 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
TMCO3-208ENST00000491166 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
TMCO3-208ENST00000491166 FLAD1Q8NFF5 587 aa16.84■□□□□ 0.29
TMCO3-208ENST00000491166 COL3A1P02461 1466 aaPredicted RBP16.83■□□□□ 0.28
TMCO3-208ENST00000491166 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
TMCO3-208ENST00000491166 LGR6Q9HBX8 967 aa16.83■□□□□ 0.28
TMCO3-208ENST00000491166 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
TMCO3-208ENST00000491166 UBR3Q6ZT12 1888 aa16.82■□□□□ 0.28
TMCO3-208ENST00000491166 SSFA2P28290 1259 aa16.81■□□□□ 0.28
TMCO3-208ENST00000491166 HMGB2P26583 209 aaKnown RBP16.8■□□□□ 0.28
TMCO3-208ENST00000491166 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
TMCO3-208ENST00000491166 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
TMCO3-208ENST00000491166 RBM46Q8TBY0 533 aaKnown RBP16.79■□□□□ 0.28
TMCO3-208ENST00000491166 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
TMCO3-208ENST00000491166 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
TMCO3-208ENST00000491166 SLC39A6Q13433 755 aa16.78■□□□□ 0.28
TMCO3-208ENST00000491166 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
TMCO3-208ENST00000491166 RTCBQ9Y3I0 505 aaKnown RBP16.78■□□□□ 0.28
TMCO3-208ENST00000491166 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
TMCO3-208ENST00000491166 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.27
TMCO3-208ENST00000491166 CNTNAP4Q9C0A0 1308 aa16.76■□□□□ 0.27
TMCO3-208ENST00000491166 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
TMCO3-208ENST00000491166 CICQ96RK0 1608 aaPredicted RBP16.75■□□□□ 0.27
TMCO3-208ENST00000491166 PRKAR2BP31323 418 aa16.75■□□□□ 0.27
TMCO3-208ENST00000491166 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
TMCO3-208ENST00000491166 TRAPPC3LQ5T215 181 aa16.75■□□□□ 0.27
TMCO3-208ENST00000491166 ARHGEF1Q92888 912 aaKnown RBP16.75■□□□□ 0.27
TMCO3-208ENST00000491166 RC3H1Q5TC82 1133 aaKnown RBP16.74■□□□□ 0.27
TMCO3-208ENST00000491166 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
TMCO3-208ENST00000491166 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
TMCO3-208ENST00000491166 MRC1P22897 1456 aa16.73■□□□□ 0.27
TMCO3-208ENST00000491166 RPS6KA4O75676 772 aa16.73■□□□□ 0.27
TMCO3-208ENST00000491166 MMP10P09238 476 aa16.73■□□□□ 0.27
TMCO3-208ENST00000491166 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
TMCO3-208ENST00000491166 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
TMCO3-208ENST00000491166 RFC4P35249 363 aa16.72■□□□□ 0.27
TMCO3-208ENST00000491166 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
TMCO3-208ENST00000491166 FSTL1Q12841 308 aa16.72■□□□□ 0.27
TMCO3-208ENST00000491166 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
TMCO3-208ENST00000491166 SRP68Q9UHB9 627 aaKnown RBP16.72■□□□□ 0.27
TMCO3-208ENST00000491166 BCS1LQ9Y276 419 aa16.72■□□□□ 0.27
TMCO3-208ENST00000491166 TJP1Q07157 1748 aa16.72■□□□□ 0.27
TMCO3-208ENST00000491166 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
TMCO3-208ENST00000491166 ARHGAP27Q6ZUM4 889 aa16.71■□□□□ 0.27
TMCO3-208ENST00000491166 IL17REQ8NFR9 667 aa16.71■□□□□ 0.27
TMCO3-208ENST00000491166 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
TMCO3-208ENST00000491166 ZNF831Q5JPB2 1677 aa16.71■□□□□ 0.27
TMCO3-208ENST00000491166 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
TMCO3-208ENST00000491166 GNAT3A8MTJ3 354 aa16.7■□□□□ 0.26
TMCO3-208ENST00000491166 GYS1P13807 737 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms