RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 C1orf141Q5JVX7 400 aa26.85■■□□□ 1.89
SREBF1-216ENST00000490796 GNPATO15228 680 aa26.84■■□□□ 1.89
SREBF1-216ENST00000490796 GRIN3BO60391 1043 aa26.84■■□□□ 1.89
SREBF1-216ENST00000490796 CABP4P57796 275 aa26.84■■□□□ 1.89
SREBF1-216ENST00000490796 RBM42Q9BTD8 480 aaKnown RBP26.83■■□□□ 1.89
SREBF1-216ENST00000490796 CD2APQ9Y5K6 639 aa26.83■■□□□ 1.89
SREBF1-216ENST00000490796 MTHFSP49914 203 aa26.82■■□□□ 1.88
SREBF1-216ENST00000490796 ITPK1Q13572 414 aa26.82■■□□□ 1.88
SREBF1-216ENST00000490796 SULT6B1Q6IMI4 303 aa26.82■■□□□ 1.88
SREBF1-216ENST00000490796 SMIM5Q71RC9 77 aa26.82■■□□□ 1.88
SREBF1-216ENST00000490796 KIF7Q2M1P5 1343 aa26.82■■□□□ 1.88
SREBF1-216ENST00000490796 AEBP1Q8IUX7 1158 aa26.81■■□□□ 1.88
SREBF1-216ENST00000490796 AMIGO3Q86WK7 504 aa26.8■■□□□ 1.88
SREBF1-216ENST00000490796 AMER1Q5JTC6 1135 aaPredicted RBP26.79■■□□□ 1.88
SREBF1-216ENST00000490796 UBR3Q6ZT12 1888 aa26.78■■□□□ 1.88
SREBF1-216ENST00000490796 RTCBQ9Y3I0 505 aaKnown RBP26.77■■□□□ 1.88
SREBF1-216ENST00000490796 IL13P35225 146 aa26.76■■□□□ 1.87
SREBF1-216ENST00000490796 YBX3P16989 372 aaKnown RBP eCLIP26.75■■□□□ 1.87
SREBF1-216ENST00000490796 TRAPPC3LQ5T215 181 aa26.75■■□□□ 1.87
SREBF1-216ENST00000490796 GOLGB1Q14789 3259 aaKnown RBP26.75■■□□□ 1.87
SREBF1-216ENST00000490796 KDM6AO15550 1401 aaPredicted RBP26.73■■□□□ 1.87
SREBF1-216ENST00000490796 CC2D1BQ5T0F9 858 aaKnown RBP26.73■■□□□ 1.87
SREBF1-216ENST00000490796 KDRP35968 1356 aa26.72■■□□□ 1.87
SREBF1-216ENST00000490796 PTCD1O75127 700 aaKnown RBP26.71■■□□□ 1.87
SREBF1-216ENST00000490796 RC3H1Q5TC82 1133 aaKnown RBP26.71■■□□□ 1.87
SREBF1-216ENST00000490796 NFATC2IPQ8NCF5 419 aa26.71■■□□□ 1.87
SREBF1-216ENST00000490796 SLC4A9Q96Q91 983 aa26.7■■□□□ 1.86
SREBF1-216ENST00000490796 ADRA2BP18089 450 aa26.69■■□□□ 1.86
SREBF1-216ENST00000490796 RFC4P35249 363 aa26.69■■□□□ 1.86
SREBF1-216ENST00000490796 CNGB1Q14028 1251 aaPredicted RBP26.69■■□□□ 1.86
SREBF1-216ENST00000490796 AKAP4Q5JQC9 854 aa26.69■■□□□ 1.86
SREBF1-216ENST00000490796 NLGN1Q8N2Q7 840 aa26.69■■□□□ 1.86
SREBF1-216ENST00000490796 CNTNAP4Q9C0A0 1308 aa26.68■■□□□ 1.86
SREBF1-216ENST00000490796 MMP10P09238 476 aa26.68■■□□□ 1.86
SREBF1-216ENST00000490796 HMOX1P09601 288 aa26.68■■□□□ 1.86
SREBF1-216ENST00000490796 DIAPH1O60610 1272 aaKnown RBP26.67■■□□□ 1.86
SREBF1-216ENST00000490796 RPS6KA4O75676 772 aa26.67■■□□□ 1.86
SREBF1-216ENST00000490796 PER1O15534 1290 aaPredicted RBP26.66■■□□□ 1.86
SREBF1-216ENST00000490796 ARHGEF1Q92888 912 aaKnown RBP26.66■■□□□ 1.86
SREBF1-216ENST00000490796 WWC3Q9ULE0 1092 aa26.65■■□□□ 1.86
SREBF1-216ENST00000490796 GIGYF1O75420 1035 aaPredicted RBP26.64■■□□□ 1.86
SREBF1-216ENST00000490796 ZNF831Q5JPB2 1677 aa26.63■■□□□ 1.85
SREBF1-216ENST00000490796 C1QTNF8P60827 252 aa26.62■■□□□ 1.85
SREBF1-216ENST00000490796 SLC52A2Q9HAB3 445 aa26.62■■□□□ 1.85
SREBF1-216ENST00000490796 CRKLP46109 303 aaKnown RBP26.61■■□□□ 1.85
SREBF1-216ENST00000490796 PARP3Q9Y6F1 533 aa26.61■■□□□ 1.85
SREBF1-216ENST00000490796 CCDC87Q9NVE4 849 aa26.6■■□□□ 1.85
SREBF1-216ENST00000490796 RNMTO43148 476 aaKnown RBP26.59■■□□□ 1.85
SREBF1-216ENST00000490796 GYS1P13807 737 aa26.59■■□□□ 1.85
SREBF1-216ENST00000490796 LGR6Q9HBX8 967 aa26.59■■□□□ 1.85
SREBF1-216ENST00000490796 U2SURPO15042 1029 aaKnown RBP26.58■■□□□ 1.85
SREBF1-216ENST00000490796 COL5A3P25940 1745 aaPredicted RBP26.58■■□□□ 1.85
SREBF1-216ENST00000490796 SENP3-EIF4A1A0A087X0R7 540 aa26.57■■□□□ 1.84
SREBF1-216ENST00000490796 MTHFSDQ2M296 383 aaKnown RBP26.57■■□□□ 1.84
SREBF1-216ENST00000490796 NPC1L1Q9UHC9 1359 aa26.57■■□□□ 1.84
SREBF1-216ENST00000490796 SCN11AQ9UI33 1791 aa26.56■■□□□ 1.84
SREBF1-216ENST00000490796 TGFB2P61812 414 aa26.56■■□□□ 1.84
SREBF1-216ENST00000490796 CICQ96RK0 1608 aaPredicted RBP26.54■■□□□ 1.84
SREBF1-216ENST00000490796 ATP10DQ9P241 1426 aa26.54■■□□□ 1.84
SREBF1-216ENST00000490796 MYH14Q7Z406 1995 aaKnown RBP26.53■■□□□ 1.84
SREBF1-216ENST00000490796 SLC39A6Q13433 755 aa26.53■■□□□ 1.84
SREBF1-216ENST00000490796 DNAJC10Q8IXB1 793 aa26.53■■□□□ 1.84
SREBF1-216ENST00000490796 A0A0G2JLW4 131 aa26.52■■□□□ 1.84
SREBF1-216ENST00000490796 CFAP53Q96M91 514 aa26.52■■□□□ 1.84
SREBF1-216ENST00000490796 GPBP1L1Q9HC44 474 aaPredicted RBP26.52■■□□□ 1.84
SREBF1-216ENST00000490796 SRP68Q9UHB9 627 aaKnown RBP26.52■■□□□ 1.84
SREBF1-216ENST00000490796 BCS1LQ9Y276 419 aa26.52■■□□□ 1.84
SREBF1-216ENST00000490796 ZPR1O75312 459 aa26.51■■□□□ 1.83
SREBF1-216ENST00000490796 USP42Q9H9J4 1324 aaKnown RBP26.5■■□□□ 1.83
SREBF1-216ENST00000490796 INTS5Q6P9B9 1019 aaKnown RBP26.5■■□□□ 1.83
SREBF1-216ENST00000490796 TTC5Q8N0Z6 440 aa26.5■■□□□ 1.83
SREBF1-216ENST00000490796 GAS2L2Q8NHY3 880 aa26.5■■□□□ 1.83
SREBF1-216ENST00000490796 PXDNLA1KZ92 1463 aa26.49■■□□□ 1.83
SREBF1-216ENST00000490796 C10orf71Q711Q0 1435 aa26.49■■□□□ 1.83
SREBF1-216ENST00000490796 ZNF526Q8TF50 670 aaPredicted RBP26.49■■□□□ 1.83
SREBF1-216ENST00000490796 C4AP0C0L4 1744 aa26.48■■□□□ 1.83
SREBF1-216ENST00000490796 TEFQ10587 303 aa26.48■■□□□ 1.83
SREBF1-216ENST00000490796 FKBP8Q14318 412 aa26.48■■□□□ 1.83
SREBF1-216ENST00000490796 MRC1P22897 1456 aa26.48■■□□□ 1.83
SREBF1-216ENST00000490796 TJP1Q07157 1748 aa26.48■■□□□ 1.83
SREBF1-216ENST00000490796 FCHSD2O94868 740 aa26.47■■□□□ 1.83
SREBF1-216ENST00000490796 CYP19A1P11511 503 aaPredicted RBP26.47■■□□□ 1.83
SREBF1-216ENST00000490796 DPEP1P16444 411 aa26.47■■□□□ 1.83
SREBF1-216ENST00000490796 GNAT3A8MTJ3 354 aa26.46■■□□□ 1.83
SREBF1-216ENST00000490796 VSIG10Q8N0Z9 540 aa26.45■■□□□ 1.82
SREBF1-216ENST00000490796 NUDCQ9Y266 331 aa26.45■■□□□ 1.82
SREBF1-216ENST00000490796 KIF13BQ9NQT8 1826 aa26.44■■□□□ 1.82
SREBF1-216ENST00000490796 SOS1Q07889 1333 aaPredicted RBP26.44■■□□□ 1.82
SREBF1-216ENST00000490796 COL3A1P02461 1466 aaPredicted RBP26.44■■□□□ 1.82
SREBF1-216ENST00000490796 USPL1Q5W0Q7 1092 aa26.44■■□□□ 1.82
SREBF1-216ENST00000490796 ARHGAP27Q6ZUM4 889 aa26.44■■□□□ 1.82
SREBF1-216ENST00000490796 STARD3NLO95772 234 aa26.43■■□□□ 1.82
SREBF1-216ENST00000490796 ADCY9O60503 1353 aa26.43■■□□□ 1.82
SREBF1-216ENST00000490796 N4BP2Q86UW6 1770 aaPredicted RBP26.43■■□□□ 1.82
SREBF1-216ENST00000490796 DDR1Q08345 913 aa26.42■■□□□ 1.82
SREBF1-216ENST00000490796 PIM2Q9P1W9 311 aa26.42■■□□□ 1.82
SREBF1-216ENST00000490796 ZBTB1Q9Y2K1 713 aa26.42■■□□□ 1.82
SREBF1-216ENST00000490796 VIRMAQ69YN4 1812 aaKnown RBP26.41■■□□□ 1.82
SREBF1-216ENST00000490796 KCPQ6ZWJ8 1503 aa26.4■■□□□ 1.82
SREBF1-216ENST00000490796 CANXP27824 592 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms