RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
COL2A1-207ENST00000490609 KDRP35968 1356 aa21.48■■□□□ 1.03
COL2A1-207ENST00000490609 GRIN3BO60391 1043 aa21.48■■□□□ 1.03
COL2A1-207ENST00000490609 SSFA2P28290 1259 aa21.48■■□□□ 1.03
COL2A1-207ENST00000490609 PLEKHG2Q9H7P9 1386 aa21.47■■□□□ 1.03
COL2A1-207ENST00000490609 KDM6AO15550 1401 aaPredicted RBP21.46■■□□□ 1.03
COL2A1-207ENST00000490609 ATP6V1AP38606 617 aa21.46■■□□□ 1.03
COL2A1-207ENST00000490609 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.02
COL2A1-207ENST00000490609 EIF4G2P78344 907 aaKnown RBP eCLIP21.45■■□□□ 1.02
COL2A1-207ENST00000490609 N4BP2Q86UW6 1770 aaPredicted RBP21.45■■□□□ 1.02
COL2A1-207ENST00000490609 AEBP1Q8IUX7 1158 aa21.44■■□□□ 1.02
COL2A1-207ENST00000490609 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
COL2A1-207ENST00000490609 ERVV-2B6SEH9 535 aa21.43■■□□□ 1.02
COL2A1-207ENST00000490609 GNPATO15228 680 aa21.43■■□□□ 1.02
COL2A1-207ENST00000490609 ADCY9O60503 1353 aa21.43■■□□□ 1.02
COL2A1-207ENST00000490609 SENP3-EIF4A1A0A087X0R7 540 aa21.42■■□□□ 1.02
COL2A1-207ENST00000490609 C4AP0C0L4 1744 aa21.42■■□□□ 1.02
COL2A1-207ENST00000490609 SCN11AQ9UI33 1791 aa21.42■■□□□ 1.02
COL2A1-207ENST00000490609 ATP10DQ9P241 1426 aa21.41■■□□□ 1.02
COL2A1-207ENST00000490609 BRCA1P38398 1863 aaKnown RBP21.41■■□□□ 1.02
COL2A1-207ENST00000490609 GIGYF1O75420 1035 aaPredicted RBP21.4■■□□□ 1.02
COL2A1-207ENST00000490609 DCAF5Q96JK2 942 aa21.4■■□□□ 1.02
COL2A1-207ENST00000490609 WWC3Q9ULE0 1092 aa21.4■■□□□ 1.02
COL2A1-207ENST00000490609 TJP1Q07157 1748 aa21.38■■□□□ 1.01
COL2A1-207ENST00000490609 ADAMTS7Q9UKP4 1686 aa21.38■■□□□ 1.01
COL2A1-207ENST00000490609 IL13P35225 146 aa21.38■■□□□ 1.01
COL2A1-207ENST00000490609 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
COL2A1-207ENST00000490609 MMP10P09238 476 aa21.37■■□□□ 1.01
COL2A1-207ENST00000490609 RC3H1Q5TC82 1133 aaKnown RBP21.37■■□□□ 1.01
COL2A1-207ENST00000490609 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
COL2A1-207ENST00000490609 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
COL2A1-207ENST00000490609 CICQ96RK0 1608 aaPredicted RBP21.37■■□□□ 1.01
COL2A1-207ENST00000490609 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
COL2A1-207ENST00000490609 RBM42Q9BTD8 480 aaKnown RBP21.36■■□□□ 1.01
COL2A1-207ENST00000490609 PXDNLA1KZ92 1463 aa21.36■■□□□ 1.01
COL2A1-207ENST00000490609 TRAPPC3LQ5T215 181 aa21.35■■□□□ 1.01
COL2A1-207ENST00000490609 MORC1Q86VD1 984 aa21.35■■□□□ 1.01
COL2A1-207ENST00000490609 CNTNAP4Q9C0A0 1308 aa21.34■■□□□ 1.01
COL2A1-207ENST00000490609 HSP90AB1P08238 724 aaKnown RBP21.34■■□□□ 1.01
COL2A1-207ENST00000490609 GYS1P13807 737 aa21.34■■□□□ 1.01
COL2A1-207ENST00000490609 AMOTQ4VCS5 1084 aa21.34■■□□□ 1.01
COL2A1-207ENST00000490609 NFATC2IPQ8NCF5 419 aa21.34■■□□□ 1.01
COL2A1-207ENST00000490609 RTCBQ9Y3I0 505 aaKnown RBP21.34■■□□□ 1.01
COL2A1-207ENST00000490609 RPS6KA4O75676 772 aa21.33■■□□□ 1.01
COL2A1-207ENST00000490609 SULT6B1Q6IMI4 303 aa21.33■■□□□ 1.01
COL2A1-207ENST00000490609 C10orf71Q711Q0 1435 aa21.32■■□□□ 1
COL2A1-207ENST00000490609 MTHFSP49914 203 aa21.32■■□□□ 1
COL2A1-207ENST00000490609 CABP4P57796 275 aa21.32■■□□□ 1
COL2A1-207ENST00000490609 A0A0G2JLW4 131 aa21.3■■□□□ 1
COL2A1-207ENST00000490609 PER1O15534 1290 aaPredicted RBP21.3■■□□□ 1
COL2A1-207ENST00000490609 PTCD1O75127 700 aaKnown RBP21.3■■□□□ 1
COL2A1-207ENST00000490609 KCNA3P22001 575 aa21.3■■□□□ 1
COL2A1-207ENST00000490609 NLGN1Q8N2Q7 840 aa21.3■■□□□ 1
COL2A1-207ENST00000490609 KIF7Q2M1P5 1343 aa21.29■■□□□ 1
COL2A1-207ENST00000490609 ARFGEF1Q9Y6D6 1849 aa21.29■■□□□ 1
COL2A1-207ENST00000490609 ADRA2BP18089 450 aa21.29■■□□□ 1
COL2A1-207ENST00000490609 LGR6Q9HBX8 967 aa21.29■■□□□ 1
COL2A1-207ENST00000490609 KNSTRNQ9Y448 316 aa21.28■■□□□ 1
COL2A1-207ENST00000490609 CRKLP46109 303 aaKnown RBP21.27■■□□□ 1
COL2A1-207ENST00000490609 TGFB2P61812 414 aa21.27■■□□□ 1
COL2A1-207ENST00000490609 INTS5Q6P9B9 1019 aaKnown RBP21.27■■□□□ 1
COL2A1-207ENST00000490609 ZNF526Q8TF50 670 aaPredicted RBP21.27■■□□□ 1
COL2A1-207ENST00000490609 GPBP1L1Q9HC44 474 aaPredicted RBP21.27■■□□□ 1
COL2A1-207ENST00000490609 SRP68Q9UHB9 627 aaKnown RBP21.27■■□□□ 1
COL2A1-207ENST00000490609 DPEP1P16444 411 aa21.26■□□□□ 0.99
COL2A1-207ENST00000490609 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
COL2A1-207ENST00000490609 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
COL2A1-207ENST00000490609 KIF3CO14782 793 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 SBF1O95248 1867 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 RFC4P35249 363 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 DDR1Q08345 913 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 FKBP8Q14318 412 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 MRC1P22897 1456 aa21.25■□□□□ 0.99
COL2A1-207ENST00000490609 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
COL2A1-207ENST00000490609 KCPQ6ZWJ8 1503 aa21.23■□□□□ 0.99
COL2A1-207ENST00000490609 USP42Q9H9J4 1324 aaKnown RBP21.23■□□□□ 0.99
COL2A1-207ENST00000490609 UBR2Q8IWV8 1755 aa21.23■□□□□ 0.99
COL2A1-207ENST00000490609 DNAJC10Q8IXB1 793 aa21.22■□□□□ 0.99
COL2A1-207ENST00000490609 SLC52A2Q9HAB3 445 aa21.22■□□□□ 0.99
COL2A1-207ENST00000490609 RNMTO43148 476 aaKnown RBP21.21■□□□□ 0.99
COL2A1-207ENST00000490609 HMOX1P09601 288 aa21.21■□□□□ 0.99
COL2A1-207ENST00000490609 TM4SF1P30408 202 aa21.21■□□□□ 0.99
COL2A1-207ENST00000490609 SLC39A6Q13433 755 aa21.21■□□□□ 0.99
COL2A1-207ENST00000490609 BCS1LQ9Y276 419 aa21.21■□□□□ 0.99
COL2A1-207ENST00000490609 MTHFSDQ2M296 383 aaKnown RBP21.2■□□□□ 0.98
COL2A1-207ENST00000490609 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
COL2A1-207ENST00000490609 PARP3Q9Y6F1 533 aa21.2■□□□□ 0.98
COL2A1-207ENST00000490609 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
COL2A1-207ENST00000490609 NRXN2Q9P2S2 1712 aa21.19■□□□□ 0.98
COL2A1-207ENST00000490609 SIPA1L3O60292 1781 aaPredicted RBP21.19■□□□□ 0.98
COL2A1-207ENST00000490609 CYP19A1P11511 503 aaPredicted RBP21.18■□□□□ 0.98
COL2A1-207ENST00000490609 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
COL2A1-207ENST00000490609 HSPA6P17066 643 aa21.17■□□□□ 0.98
COL2A1-207ENST00000490609 SOS1Q07889 1333 aaPredicted RBP21.17■□□□□ 0.98
COL2A1-207ENST00000490609 CC2D1BQ5T0F9 858 aaKnown RBP21.16■□□□□ 0.98
COL2A1-207ENST00000490609 ARHGAP27Q6ZUM4 889 aa21.16■□□□□ 0.98
COL2A1-207ENST00000490609 BCL2L12Q9HB09 334 aa21.16■□□□□ 0.98
COL2A1-207ENST00000490609 PCNTO95613 3336 aa21.16■□□□□ 0.98
COL2A1-207ENST00000490609 FCHSD2O94868 740 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms