RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
NINJ1-205ENST00000490564 PPP1R1BQ9UD71 204 aaPredicted RBP14.06□□□□□ -0.16
NINJ1-205ENST00000490564 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
NINJ1-205ENST00000490564 TJP1Q07157 1748 aa14.05□□□□□ -0.16
NINJ1-205ENST00000490564 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
NINJ1-205ENST00000490564 U2SURPO15042 1029 aaKnown RBP14.05□□□□□ -0.16
NINJ1-205ENST00000490564 CABP4P57796 275 aa14.05□□□□□ -0.16
NINJ1-205ENST00000490564 MTHFSDQ2M296 383 aaKnown RBP14.05□□□□□ -0.16
NINJ1-205ENST00000490564 LINC00116Q8NCU8 138 aa14.03□□□□□ -0.16
NINJ1-205ENST00000490564 NUDCQ9Y266 331 aa14.03□□□□□ -0.16
NINJ1-205ENST00000490564 UBR2Q8IWV8 1755 aa14.03□□□□□ -0.16
NINJ1-205ENST00000490564 ATP6V1AP38606 617 aa14.02□□□□□ -0.17
NINJ1-205ENST00000490564 ITPK1Q13572 414 aa14.02□□□□□ -0.17
NINJ1-205ENST00000490564 AMIGO3Q86WK7 504 aa14.02□□□□□ -0.17
NINJ1-205ENST00000490564 COL23A1Q86Y22 540 aaPredicted RBP14.02□□□□□ -0.17
NINJ1-205ENST00000490564 NFATC2IPQ8NCF5 419 aa14.02□□□□□ -0.17
NINJ1-205ENST00000490564 AK7Q96M32 723 aa14.02□□□□□ -0.17
NINJ1-205ENST00000490564 RSPH6AQ9H0K4 717 aa14.02□□□□□ -0.17
NINJ1-205ENST00000490564 RNMTO43148 476 aaKnown RBP14.01□□□□□ -0.17
NINJ1-205ENST00000490564 ZEB1P37275 1124 aaPredicted RBP14.01□□□□□ -0.17
NINJ1-205ENST00000490564 FLAD1Q8NFF5 587 aa14.01□□□□□ -0.17
NINJ1-205ENST00000490564 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
NINJ1-205ENST00000490564 SLC4A9Q96Q91 983 aa14.01□□□□□ -0.17
NINJ1-205ENST00000490564 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
NINJ1-205ENST00000490564 LGR6Q9HBX8 967 aa14.01□□□□□ -0.17
NINJ1-205ENST00000490564 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
NINJ1-205ENST00000490564 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 C4AP0C0L4 1744 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
NINJ1-205ENST00000490564 SMIM5Q71RC9 77 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 ARXQ96QS3 562 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
NINJ1-205ENST00000490564 DLG5Q8TDM6 1919 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 KCPQ6ZWJ8 1503 aa13.99□□□□□ -0.17
NINJ1-205ENST00000490564 MSH5O43196 834 aa13.98□□□□□ -0.17
NINJ1-205ENST00000490564 U2AF1L5P0DN76 240 aaPredicted RBP13.98□□□□□ -0.17
NINJ1-205ENST00000490564 SSFA2P28290 1259 aa13.98□□□□□ -0.17
NINJ1-205ENST00000490564 POLD1P28340 1107 aa13.98□□□□□ -0.17
NINJ1-205ENST00000490564 U2AF1Q01081 240 aaKnown RBP eCLIP13.98□□□□□ -0.17
NINJ1-205ENST00000490564 RALBP1Q15311 655 aa13.98□□□□□ -0.17
NINJ1-205ENST00000490564 CNTNAP4Q9C0A0 1308 aa13.97□□□□□ -0.17
NINJ1-205ENST00000490564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.97□□□□□ -0.17
NINJ1-205ENST00000490564 GNAT3A8MTJ3 354 aa13.97□□□□□ -0.17
NINJ1-205ENST00000490564 FCHSD2O94868 740 aa13.97□□□□□ -0.17
NINJ1-205ENST00000490564 PHACTR3Q96KR7 559 aa13.97□□□□□ -0.17
NINJ1-205ENST00000490564 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
NINJ1-205ENST00000490564 GNPATO15228 680 aa13.96□□□□□ -0.17
NINJ1-205ENST00000490564 PHF14O94880 888 aa13.96□□□□□ -0.17
NINJ1-205ENST00000490564 RC3H1Q5TC82 1133 aaKnown RBP13.96□□□□□ -0.17
NINJ1-205ENST00000490564 CEMIPQ8WUJ3 1361 aa13.96□□□□□ -0.18
NINJ1-205ENST00000490564 PTCD1O75127 700 aaKnown RBP13.95□□□□□ -0.18
NINJ1-205ENST00000490564 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
NINJ1-205ENST00000490564 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
NINJ1-205ENST00000490564 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
NINJ1-205ENST00000490564 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
NINJ1-205ENST00000490564 MSL1Q68DK7 614 aa13.93□□□□□ -0.18
NINJ1-205ENST00000490564 RTCBQ9Y3I0 505 aaKnown RBP13.93□□□□□ -0.18
NINJ1-205ENST00000490564 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
NINJ1-205ENST00000490564 ADRA2BP18089 450 aa13.92□□□□□ -0.18
NINJ1-205ENST00000490564 TEFQ10587 303 aa13.92□□□□□ -0.18
NINJ1-205ENST00000490564 VSIG10Q8N0Z9 540 aa13.92□□□□□ -0.18
NINJ1-205ENST00000490564 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
NINJ1-205ENST00000490564 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
NINJ1-205ENST00000490564 DNAJC10Q8IXB1 793 aa13.91□□□□□ -0.18
NINJ1-205ENST00000490564 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
NINJ1-205ENST00000490564 KIF13BQ9NQT8 1826 aa13.91□□□□□ -0.18
NINJ1-205ENST00000490564 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
NINJ1-205ENST00000490564 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
NINJ1-205ENST00000490564 TTC5Q8N0Z6 440 aa13.9□□□□□ -0.18
NINJ1-205ENST00000490564 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
NINJ1-205ENST00000490564 NEFMP07197 916 aa13.89□□□□□ -0.19
NINJ1-205ENST00000490564 CYP19A1P11511 503 aaPredicted RBP13.89□□□□□ -0.19
NINJ1-205ENST00000490564 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
NINJ1-205ENST00000490564 ZNF790Q6PG37 636 aa13.89□□□□□ -0.19
NINJ1-205ENST00000490564 RTF1Q92541 710 aaKnown RBP13.89□□□□□ -0.19
NINJ1-205ENST00000490564 ARHGEF1Q92888 912 aaKnown RBP13.89□□□□□ -0.19
NINJ1-205ENST00000490564 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
NINJ1-205ENST00000490564 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
NINJ1-205ENST00000490564 MCM10Q7L590 875 aa13.88□□□□□ -0.19
NINJ1-205ENST00000490564 KLHL34Q8N239 644 aa13.88□□□□□ -0.19
NINJ1-205ENST00000490564 CCDC87Q9NVE4 849 aa13.88□□□□□ -0.19
NINJ1-205ENST00000490564 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
NINJ1-205ENST00000490564 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
NINJ1-205ENST00000490564 UTRNP46939 3433 aa13.87□□□□□ -0.19
NINJ1-205ENST00000490564 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
NINJ1-205ENST00000490564 RFC4P35249 363 aa13.87□□□□□ -0.19
NINJ1-205ENST00000490564 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
NINJ1-205ENST00000490564 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
NINJ1-205ENST00000490564 CHD4Q14839 1912 aa13.87□□□□□ -0.19
NINJ1-205ENST00000490564 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
NINJ1-205ENST00000490564 GYS1P13807 737 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 DCTN1Q14203 1278 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 NFE2L2Q16236 605 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 NLGN1Q8N2Q7 840 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 NLGN2Q8NFZ4 835 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 CD2APQ9Y5K6 639 aa13.86□□□□□ -0.19
NINJ1-205ENST00000490564 USP42Q9H9J4 1324 aaKnown RBP13.86□□□□□ -0.19
NINJ1-205ENST00000490564 MAPK8IP3Q9UPT6 1336 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms