RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 SMIM5Q71RC9 77 aa24.35■■□□□ 1.49
YIPF3-208ENST00000490447 MORC1Q86VD1 984 aa24.35■■□□□ 1.49
YIPF3-208ENST00000490447 GIGYF1O75420 1035 aaPredicted RBP24.34■■□□□ 1.49
YIPF3-208ENST00000490447 ATG3Q9NT62 314 aa24.34■■□□□ 1.49
YIPF3-208ENST00000490447 UBR3Q6ZT12 1888 aa24.33■■□□□ 1.49
YIPF3-208ENST00000490447 ERVV-2B6SEH9 535 aa24.33■■□□□ 1.48
YIPF3-208ENST00000490447 ITPK1Q13572 414 aa24.33■■□□□ 1.48
YIPF3-208ENST00000490447 DCAF5Q96JK2 942 aa24.33■■□□□ 1.48
YIPF3-208ENST00000490447 AMOTQ4VCS5 1084 aa24.32■■□□□ 1.48
YIPF3-208ENST00000490447 SENP3-EIF4A1A0A087X0R7 540 aa24.31■■□□□ 1.48
YIPF3-208ENST00000490447 ZNF530Q6P9A1 599 aaPredicted RBP24.31■■□□□ 1.48
YIPF3-208ENST00000490447 RBM42Q9BTD8 480 aaKnown RBP24.31■■□□□ 1.48
YIPF3-208ENST00000490447 KNSTRNQ9Y448 316 aa24.31■■□□□ 1.48
YIPF3-208ENST00000490447 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
YIPF3-208ENST00000490447 CABP4P57796 275 aa24.28■■□□□ 1.48
YIPF3-208ENST00000490447 RTCBQ9Y3I0 505 aaKnown RBP24.28■■□□□ 1.48
YIPF3-208ENST00000490447 KDRP35968 1356 aa24.27■■□□□ 1.48
YIPF3-208ENST00000490447 TRAPPC3LQ5T215 181 aa24.26■■□□□ 1.47
YIPF3-208ENST00000490447 MTHFSP49914 203 aa24.25■■□□□ 1.47
YIPF3-208ENST00000490447 AEBP1Q8IUX7 1158 aa24.24■■□□□ 1.47
YIPF3-208ENST00000490447 WWC3Q9ULE0 1092 aa24.24■■□□□ 1.47
YIPF3-208ENST00000490447 KDM6AO15550 1401 aaPredicted RBP24.24■■□□□ 1.47
YIPF3-208ENST00000490447 MMP10P09238 476 aa24.23■■□□□ 1.47
YIPF3-208ENST00000490447 SULT6B1Q6IMI4 303 aa24.23■■□□□ 1.47
YIPF3-208ENST00000490447 ADRA2BP18089 450 aa24.22■■□□□ 1.47
YIPF3-208ENST00000490447 SLC4A9Q96Q91 983 aa24.22■■□□□ 1.47
YIPF3-208ENST00000490447 RC3H1Q5TC82 1133 aaKnown RBP24.21■■□□□ 1.47
YIPF3-208ENST00000490447 NLGN1Q8N2Q7 840 aa24.21■■□□□ 1.47
YIPF3-208ENST00000490447 ATP10DQ9P241 1426 aa24.21■■□□□ 1.47
YIPF3-208ENST00000490447 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.47
YIPF3-208ENST00000490447 RFC4P35249 363 aa24.2■■□□□ 1.46
YIPF3-208ENST00000490447 ZNF831Q5JPB2 1677 aa24.2■■□□□ 1.46
YIPF3-208ENST00000490447 PTCD1O75127 700 aaKnown RBP24.19■■□□□ 1.46
YIPF3-208ENST00000490447 IL13P35225 146 aa24.18■■□□□ 1.46
YIPF3-208ENST00000490447 NFATC2IPQ8NCF5 419 aa24.18■■□□□ 1.46
YIPF3-208ENST00000490447 ARHGEF1Q92888 912 aaKnown RBP24.18■■□□□ 1.46
YIPF3-208ENST00000490447 GPBP1L1Q9HC44 474 aaPredicted RBP24.18■■□□□ 1.46
YIPF3-208ENST00000490447 RPS6KA4O75676 772 aa24.17■■□□□ 1.46
YIPF3-208ENST00000490447 COL5A3P25940 1745 aaPredicted RBP24.16■■□□□ 1.46
YIPF3-208ENST00000490447 CICQ96RK0 1608 aaPredicted RBP24.16■■□□□ 1.46
YIPF3-208ENST00000490447 AMER1Q5JTC6 1135 aaPredicted RBP24.15■■□□□ 1.46
YIPF3-208ENST00000490447 CCDC87Q9NVE4 849 aa24.15■■□□□ 1.46
YIPF3-208ENST00000490447 KIF7Q2M1P5 1343 aa24.15■■□□□ 1.46
YIPF3-208ENST00000490447 GYS1P13807 737 aa24.14■■□□□ 1.46
YIPF3-208ENST00000490447 TGFB2P61812 414 aa24.14■■□□□ 1.46
YIPF3-208ENST00000490447 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.46
YIPF3-208ENST00000490447 PARP3Q9Y6F1 533 aa24.14■■□□□ 1.46
YIPF3-208ENST00000490447 ADCY9O60503 1353 aa24.14■■□□□ 1.45
YIPF3-208ENST00000490447 ZNF526Q8TF50 670 aaPredicted RBP24.13■■□□□ 1.45
YIPF3-208ENST00000490447 PXDNLA1KZ92 1463 aa24.13■■□□□ 1.45
YIPF3-208ENST00000490447 CRKLP46109 303 aaKnown RBP24.12■■□□□ 1.45
YIPF3-208ENST00000490447 C10orf71Q711Q0 1435 aa24.12■■□□□ 1.45
YIPF3-208ENST00000490447 BCS1LQ9Y276 419 aa24.1■■□□□ 1.45
YIPF3-208ENST00000490447 HMOX1P09601 288 aa24.1■■□□□ 1.45
YIPF3-208ENST00000490447 A0A0G2JLW4 131 aa24.09■■□□□ 1.45
YIPF3-208ENST00000490447 SLC52A2Q9HAB3 445 aa24.09■■□□□ 1.45
YIPF3-208ENST00000490447 C4AP0C0L4 1744 aa24.08■■□□□ 1.45
YIPF3-208ENST00000490447 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.44
YIPF3-208ENST00000490447 KIF13BQ9NQT8 1826 aa24.07■■□□□ 1.44
YIPF3-208ENST00000490447 CEP350Q5VT06 3117 aa24.07■■□□□ 1.44
YIPF3-208ENST00000490447 DIAPH1O60610 1272 aaKnown RBP24.07■■□□□ 1.44
YIPF3-208ENST00000490447 SCN11AQ9UI33 1791 aa24.06■■□□□ 1.44
YIPF3-208ENST00000490447 SRP68Q9UHB9 627 aaKnown RBP24.06■■□□□ 1.44
YIPF3-208ENST00000490447 USP42Q9H9J4 1324 aaKnown RBP24.06■■□□□ 1.44
YIPF3-208ENST00000490447 DPEP1P16444 411 aa24.05■■□□□ 1.44
YIPF3-208ENST00000490447 TJP1Q07157 1748 aa24.05■■□□□ 1.44
YIPF3-208ENST00000490447 MYH14Q7Z406 1995 aaKnown RBP24.05■■□□□ 1.44
YIPF3-208ENST00000490447 LGR6Q9HBX8 967 aa24.05■■□□□ 1.44
YIPF3-208ENST00000490447 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
YIPF3-208ENST00000490447 RNMTO43148 476 aaKnown RBP24.04■■□□□ 1.44
YIPF3-208ENST00000490447 FCHSD2O94868 740 aa24.04■■□□□ 1.44
YIPF3-208ENST00000490447 KIAA1551Q9HCM1 1747 aa24.03■■□□□ 1.44
YIPF3-208ENST00000490447 PER1O15534 1290 aaPredicted RBP24.03■■□□□ 1.44
YIPF3-208ENST00000490447 ZPR1O75312 459 aa24.03■■□□□ 1.44
YIPF3-208ENST00000490447 FKBP8Q14318 412 aa24.03■■□□□ 1.44
YIPF3-208ENST00000490447 DNAJC10Q8IXB1 793 aa24.03■■□□□ 1.44
YIPF3-208ENST00000490447 MRC1P22897 1456 aa24.02■■□□□ 1.44
YIPF3-208ENST00000490447 INTS5Q6P9B9 1019 aaKnown RBP24.02■■□□□ 1.44
YIPF3-208ENST00000490447 ARHGAP27Q6ZUM4 889 aa24.02■■□□□ 1.44
YIPF3-208ENST00000490447 SLC39A6Q13433 755 aa24.01■■□□□ 1.43
YIPF3-208ENST00000490447 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
YIPF3-208ENST00000490447 MTHFSDQ2M296 383 aaKnown RBP24.01■■□□□ 1.43
YIPF3-208ENST00000490447 PIM2Q9P1W9 311 aa23.99■■□□□ 1.43
YIPF3-208ENST00000490447 DDR1Q08345 913 aa23.98■■□□□ 1.43
YIPF3-208ENST00000490447 USPL1Q5W0Q7 1092 aa23.98■■□□□ 1.43
YIPF3-208ENST00000490447 SOS1Q07889 1333 aaPredicted RBP23.97■■□□□ 1.43
YIPF3-208ENST00000490447 U2SURPO15042 1029 aaKnown RBP23.97■■□□□ 1.43
YIPF3-208ENST00000490447 CYP19A1P11511 503 aaPredicted RBP23.97■■□□□ 1.43
YIPF3-208ENST00000490447 TTC5Q8N0Z6 440 aa23.97■■□□□ 1.43
YIPF3-208ENST00000490447 HSPA6P17066 643 aa23.96■■□□□ 1.43
YIPF3-208ENST00000490447 DALRD3Q5D0E6 543 aaKnown RBP23.96■■□□□ 1.43
YIPF3-208ENST00000490447 COL15A1P39059 1388 aa23.96■■□□□ 1.43
YIPF3-208ENST00000490447 NPC1L1Q9UHC9 1359 aa23.96■■□□□ 1.43
YIPF3-208ENST00000490447 POLRMTO00411 1230 aaKnown RBP23.95■■□□□ 1.42
YIPF3-208ENST00000490447 KCNA3P22001 575 aa23.95■■□□□ 1.42
YIPF3-208ENST00000490447 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
YIPF3-208ENST00000490447 KCPQ6ZWJ8 1503 aa23.95■■□□□ 1.42
YIPF3-208ENST00000490447 KIF3CO14782 793 aa23.94■■□□□ 1.42
YIPF3-208ENST00000490447 ZBTB1Q9Y2K1 713 aa23.94■■□□□ 1.42
YIPF3-208ENST00000490447 TM4SF1P30408 202 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms